RNA–Protein interactions for RNA: ENST00000547555.5

LETMD1-210, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 1,658 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-210ENST00000547555 SGSM2O43147 1006 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 GADD45BO75293 160 aaPredicted RBP20.22■□□□□ 0.83
LETMD1-210ENST00000547555 NTSR2O95665 410 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 PTGER2P43116 358 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 GCKRQ14397 625 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 PPP1R42Q7Z4L9 355 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 SSH3Q8TE77 659 aa20.22■□□□□ 0.83
LETMD1-210ENST00000547555 DDX60Q8IY21 1712 aaKnown RBP20.22■□□□□ 0.83
LETMD1-210ENST00000547555 SERPINB2P05120 415 aa20.21■□□□□ 0.83
LETMD1-210ENST00000547555 RUFY2Q8WXA3 655 aa20.21■□□□□ 0.83
LETMD1-210ENST00000547555 SMC3Q9UQE7 1217 aa20.21■□□□□ 0.83
LETMD1-210ENST00000547555 PARP3Q9Y6F1 533 aa20.21■□□□□ 0.83
LETMD1-210ENST00000547555 ANKRD31Q8N7Z5 1873 aa20.21■□□□□ 0.83
LETMD1-210ENST00000547555 PDCP20941 246 aa20.2■□□□□ 0.82
LETMD1-210ENST00000547555 VPS53Q5VIR6 699 aa20.2■□□□□ 0.82
LETMD1-210ENST00000547555 FAM200AQ8TCP9 573 aa20.2■□□□□ 0.82
LETMD1-210ENST00000547555 NYXQ9GZU5 481 aa20.2■□□□□ 0.82
LETMD1-210ENST00000547555 SPON1Q9HCB6 807 aa20.2■□□□□ 0.82
LETMD1-210ENST00000547555 PAXBP1Q9Y5B6 917 aa20.2■□□□□ 0.82
LETMD1-210ENST00000547555 RIC1Q4ADV7 1423 aa20.2■□□□□ 0.82
LETMD1-210ENST00000547555 LRP5O75197 1615 aa20.2■□□□□ 0.82
LETMD1-210ENST00000547555 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
LETMD1-210ENST00000547555 POLD1P28340 1107 aa20.19■□□□□ 0.82
LETMD1-210ENST00000547555 NBPF5PQ86XG9 351 aaPredicted RBP20.19■□□□□ 0.82
LETMD1-210ENST00000547555 CREBRFQ8IUR6 639 aa20.19■□□□□ 0.82
LETMD1-210ENST00000547555 CNTROBQ8N137 903 aa20.19■□□□□ 0.82
LETMD1-210ENST00000547555 UTP14AQ9BVJ6 771 aaKnown RBP20.19■□□□□ 0.82
LETMD1-210ENST00000547555 TTC41PQ6P2S7 1318 aa20.19■□□□□ 0.82
LETMD1-210ENST00000547555 MYH3P11055 1940 aa20.19■□□□□ 0.82
LETMD1-210ENST00000547555 PCCAP05165 728 aaPredicted RBP20.19■□□□□ 0.82
LETMD1-210ENST00000547555 SYT1P21579 422 aa20.19■□□□□ 0.82
LETMD1-210ENST00000547555 ZBTB38Q8NAP3 1195 aaPredicted RBP20.19■□□□□ 0.82
LETMD1-210ENST00000547555 C10orf71Q711Q0 1435 aa20.18■□□□□ 0.82
LETMD1-210ENST00000547555 UTYO14607 1347 aa20.18■□□□□ 0.82
LETMD1-210ENST00000547555 NEMFO60524 1076 aa20.18■□□□□ 0.82
LETMD1-210ENST00000547555 HCLS1P14317 486 aaPredicted RBP20.18■□□□□ 0.82
LETMD1-210ENST00000547555 PRR5LQ6MZQ0 368 aa20.18■□□□□ 0.82
LETMD1-210ENST00000547555 TPTE2Q6XPS3 522 aa20.18■□□□□ 0.82
LETMD1-210ENST00000547555 CNBD1Q8NA66 436 aa20.18■□□□□ 0.82
LETMD1-210ENST00000547555 ALDH8A1Q9H2A2 487 aaPredicted RBP20.18■□□□□ 0.82
LETMD1-210ENST00000547555 HDAC5Q9UQL6 1122 aa20.18■□□□□ 0.82
LETMD1-210ENST00000547555 TNRC6CQ9HCJ0 1690 aaKnown RBP20.18■□□□□ 0.82
LETMD1-210ENST00000547555 ABCC12Q96J65 1359 aa20.17■□□□□ 0.82
LETMD1-210ENST00000547555 SH3TC1Q8TE82 1336 aa20.17■□□□□ 0.82
LETMD1-210ENST00000547555 H7C1W4 665 aa20.17■□□□□ 0.82
LETMD1-210ENST00000547555 GRM8O00222 908 aa20.17■□□□□ 0.82
LETMD1-210ENST00000547555 CASP7P55210 303 aa20.17■□□□□ 0.82
LETMD1-210ENST00000547555 GABPB1Q06547 395 aaPredicted RBP20.17■□□□□ 0.82
LETMD1-210ENST00000547555 OGFRQ9NZT2 677 aa20.17■□□□□ 0.82
LETMD1-210ENST00000547555 TRMT112Q9UI30 125 aaKnown RBP20.17■□□□□ 0.82
LETMD1-210ENST00000547555 SMTNL1A8MU46 457 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 POLA2Q14181 598 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 RILPL2Q969X0 211 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 KIF1BPQ96EK5 621 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 USP44Q9H0E7 712 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 SNX14Q9Y5W7 946 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 CDHR2Q9BYE9 1310 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 FAM177BA6PVY3 158 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 LSG1Q9H089 658 aaKnown RBP20.16■□□□□ 0.82
LETMD1-210ENST00000547555 TTC12Q9H892 705 aaPredicted RBP20.16■□□□□ 0.82
LETMD1-210ENST00000547555 EXOC6BQ9Y2D4 811 aa20.16■□□□□ 0.82
LETMD1-210ENST00000547555 CDC25BP30305 580 aa20.15■□□□□ 0.82
LETMD1-210ENST00000547555 PPP4R3BQ5MIZ7 849 aa20.15■□□□□ 0.82
LETMD1-210ENST00000547555 RBM43Q6ZSC3 357 aaKnown RBP20.15■□□□□ 0.82
LETMD1-210ENST00000547555 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
LETMD1-210ENST00000547555 FAM89AQ96GI7 184 aa20.15■□□□□ 0.82
LETMD1-210ENST00000547555 DDX19AQ9NUU7 478 aaKnown RBP20.15■□□□□ 0.82
LETMD1-210ENST00000547555 CGNQ9P2M7 1197 aaKnown RBP20.15■□□□□ 0.82
LETMD1-210ENST00000547555 CNPY2Q9Y2B0 182 aa20.15■□□□□ 0.82
LETMD1-210ENST00000547555 KIAA1551Q9HCM1 1747 aa20.15■□□□□ 0.82
LETMD1-210ENST00000547555 APBB1O00213 710 aa20.14■□□□□ 0.81
LETMD1-210ENST00000547555 HIP1O00291 1037 aa20.14■□□□□ 0.81
LETMD1-210ENST00000547555 DHX8Q14562 1220 aaKnown RBP20.14■□□□□ 0.81
LETMD1-210ENST00000547555 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
LETMD1-210ENST00000547555 SLC10A5Q5PT55 438 aa20.14■□□□□ 0.81
LETMD1-210ENST00000547555 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
LETMD1-210ENST00000547555 SYNE4Q8N205 404 aa20.14■□□□□ 0.81
LETMD1-210ENST00000547555 SCAND2PQ9GZW5 306 aaPredicted RBP20.14■□□□□ 0.81
LETMD1-210ENST00000547555 KRT85P78386 507 aa20.13■□□□□ 0.81
LETMD1-210ENST00000547555 ST5P78524 1137 aa20.13■□□□□ 0.81
LETMD1-210ENST00000547555 MAP3K11Q16584 847 aa20.13■□□□□ 0.81
LETMD1-210ENST00000547555 FOXD4L5Q5VV16 416 aaPredicted RBP20.13■□□□□ 0.81
LETMD1-210ENST00000547555 FOXD4L4Q8WXT5 416 aaPredicted RBP20.13■□□□□ 0.81
LETMD1-210ENST00000547555 C9orf78Q9NZ63 289 aaPredicted RBP20.13■□□□□ 0.81
LETMD1-210ENST00000547555 DLEC1Q9Y238 1755 aa20.13■□□□□ 0.81
LETMD1-210ENST00000547555 NBPF7P0C2Y1 421 aaPredicted RBP20.13■□□□□ 0.81
LETMD1-210ENST00000547555 ANKRD1Q15327 319 aa20.13■□□□□ 0.81
LETMD1-210ENST00000547555 UPF3BQ9BZI7 483 aaKnown RBP20.13■□□□□ 0.81
LETMD1-210ENST00000547555 ZSWIM6Q9HCJ5 1215 aa20.13■□□□□ 0.81
LETMD1-210ENST00000547555 MTMR6Q9Y217 621 aa20.13■□□□□ 0.81
LETMD1-210ENST00000547555 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
LETMD1-210ENST00000547555 GLRX3O76003 335 aaKnown RBP20.12■□□□□ 0.81
LETMD1-210ENST00000547555 GTF2E1P29083 439 aaPredicted RBP20.12■□□□□ 0.81
LETMD1-210ENST00000547555 AK2P54819 239 aa20.12■□□□□ 0.81
LETMD1-210ENST00000547555 PI4K2BQ8TCG2 481 aa20.12■□□□□ 0.81
LETMD1-210ENST00000547555 PLA2G12BQ9BX93 195 aa20.12■□□□□ 0.81
LETMD1-210ENST00000547555 IRS4O14654 1257 aaPredicted RBP20.11■□□□□ 0.81
LETMD1-210ENST00000547555 NPHP1O15259 732 aa20.11■□□□□ 0.81
LETMD1-210ENST00000547555 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
LETMD1-210ENST00000547555 JARID2Q92833 1246 aaPredicted RBP20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms