RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 USP48Q86UV5 1035 aa15.15■□□□□ 0.02
HDAC7-226ENST00000547259 DBNDD1Q9H9R9 158 aa15.15■□□□□ 0.02
HDAC7-226ENST00000547259 CWC25Q9NXE8 425 aaPredicted RBP15.15■□□□□ 0.02
HDAC7-226ENST00000547259 MYH3P11055 1940 aa15.15■□□□□ 0.02
HDAC7-226ENST00000547259 DUOX1Q9NRD9 1551 aa15.15■□□□□ 0.02
HDAC7-226ENST00000547259 CCDC85CA6NKD9 419 aa15.14■□□□□ 0.01
HDAC7-226ENST00000547259 ECE2O60344 883 aa15.14■□□□□ 0.01
HDAC7-226ENST00000547259 GPSM2P81274 684 aa15.14■□□□□ 0.01
HDAC7-226ENST00000547259 SULF1Q8IWU6 871 aa15.14■□□□□ 0.01
HDAC7-226ENST00000547259 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-226ENST00000547259 TBC1D16Q8TBP0 767 aa15.14■□□□□ 0.01
HDAC7-226ENST00000547259 ANKIB1Q9P2G1 1089 aa15.14■□□□□ 0.01
HDAC7-226ENST00000547259 POLLQ9UGP5 575 aa15.14■□□□□ 0.01
HDAC7-226ENST00000547259 ZBTB12Q9Y330 459 aaPredicted RBP15.14■□□□□ 0.01
HDAC7-226ENST00000547259 AKAP11Q9UKA4 1901 aa15.13■□□□□ 0.01
HDAC7-226ENST00000547259 VIL1P09327 827 aaKnown RBP15.13■□□□□ 0.01
HDAC7-226ENST00000547259 RGS19P49795 217 aa15.13■□□□□ 0.01
HDAC7-226ENST00000547259 GCKRQ14397 625 aa15.13■□□□□ 0.01
HDAC7-226ENST00000547259 TBC1D10BQ4KMP7 808 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-226ENST00000547259 RGMBQ6NW40 437 aa15.13■□□□□ 0.01
HDAC7-226ENST00000547259 SAMD7Q7Z3H4 446 aa15.13■□□□□ 0.01
HDAC7-226ENST00000547259 CRBNQ96SW2 442 aa15.13■□□□□ 0.01
HDAC7-226ENST00000547259 GBA2Q9HCG7 927 aaPredicted RBP15.13■□□□□ 0.01
HDAC7-226ENST00000547259 GGA1Q9UJY5 639 aa15.13■□□□□ 0.01
HDAC7-226ENST00000547259 DDX19BQ9UMR2 479 aa15.13■□□□□ 0.01
HDAC7-226ENST00000547259 PDE8AO60658 829 aa15.12■□□□□ 0.01
HDAC7-226ENST00000547259 PCCAP05165 728 aaPredicted RBP15.12■□□□□ 0.01
HDAC7-226ENST00000547259 MLLT1Q03111 559 aaPredicted RBP15.12■□□□□ 0.01
HDAC7-226ENST00000547259 RTL5Q5HYW3 569 aaPredicted RBP15.12■□□□□ 0.01
HDAC7-226ENST00000547259 AGBL3Q8NEM8 1001 aa15.12■□□□□ 0.01
HDAC7-226ENST00000547259 SAGE1Q9NXZ1 904 aa15.12■□□□□ 0.01
HDAC7-226ENST00000547259 C9orf78Q9NZ63 289 aaPredicted RBP15.12■□□□□ 0.01
HDAC7-226ENST00000547259 GRM8O00222 908 aa15.11■□□□□ 0.01
HDAC7-226ENST00000547259 DOK7Q18PE1 504 aa15.11■□□□□ 0.01
HDAC7-226ENST00000547259 KIF4BQ2VIQ3 1234 aa15.11■□□□□ 0.01
HDAC7-226ENST00000547259 ZNF609O15014 1411 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 UFL1O94874 794 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 MMP14P50281 582 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 ZNF157P51786 506 aaPredicted RBP15.1■□□□□ 0.01
HDAC7-226ENST00000547259 FKBP1BP68106 108 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 RBM26Q5T8P6 1007 aaKnown RBP15.1■□□□□ 0.01
HDAC7-226ENST00000547259 UBE3BQ7Z3V4 1068 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 PODNQ7Z5L7 613 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 ANKRD18AQ8IVF6 992 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 CDC5LQ99459 802 aaKnown RBP15.1■□□□□ 0.01
HDAC7-226ENST00000547259 MEIS3Q99687 375 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 CHMP4BQ9H444 224 aaKnown RBP15.1■□□□□ 0.01
HDAC7-226ENST00000547259 TSKSQ9UJT2 592 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 XDHP47989 1333 aa15.1■□□□□ 0.01
HDAC7-226ENST00000547259 PDE4DIPQ5VU43 2346 aa15.09■□□□□ 0.01
HDAC7-226ENST00000547259 SHTN1A0MZ66 631 aa15.09■□□□□ 0.01
HDAC7-226ENST00000547259 GNAI3P08754 354 aa15.09■□□□□ 0.01
HDAC7-226ENST00000547259 UBTFL1P0CB47 393 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-226ENST00000547259 ATP2B4P23634 1241 aa15.09■□□□□ 0.01
HDAC7-226ENST00000547259 FAM161AQ3B820 660 aa15.09■□□□□ 0.01
HDAC7-226ENST00000547259 RSBN1LQ6PCB5 846 aaPredicted RBP15.09■□□□□ 0.01
HDAC7-226ENST00000547259 MCOLN1Q9GZU1 580 aa15.09■□□□□ 0.01
HDAC7-226ENST00000547259 USP44Q9H0E7 712 aa15.09■□□□□ 0.01
HDAC7-226ENST00000547259 PSME4Q14997 1843 aa15.08■□□□□ 0.01
HDAC7-226ENST00000547259 NBPF7P0C2Y1 421 aaPredicted RBP15.08■□□□□ 0
HDAC7-226ENST00000547259 ZNF280AP59817 542 aaPredicted RBP15.08■□□□□ 0
HDAC7-226ENST00000547259 DGKZQ13574 1117 aa15.08■□□□□ 0
HDAC7-226ENST00000547259 EXOC6Q8TAG9 804 aa15.08■□□□□ 0
HDAC7-226ENST00000547259 JARID2Q92833 1246 aaPredicted RBP15.08■□□□□ 0
HDAC7-226ENST00000547259 UTYO14607 1347 aa15.08■□□□□ 0
HDAC7-226ENST00000547259 PITPNM2Q9BZ72 1349 aa15.08■□□□□ 0
HDAC7-226ENST00000547259 RTL9Q8NET4 1388 aa15.08■□□□□ 0
HDAC7-226ENST00000547259 SCN9AQ15858 1988 aa15.07■□□□□ 0
HDAC7-226ENST00000547259 H7C1W4 665 aa15.07■□□□□ 0
HDAC7-226ENST00000547259 ZBTB7BO15156 539 aaPredicted RBP15.07■□□□□ 0
HDAC7-226ENST00000547259 USP17L8P0C7I0 530 aa15.07■□□□□ 0
HDAC7-226ENST00000547259 SEC31BQ9NQW1 1179 aa15.07■□□□□ 0
HDAC7-226ENST00000547259 KCNQ5Q9NR82 932 aa15.07■□□□□ 0
HDAC7-226ENST00000547259 GGA3Q9NZ52 723 aa15.07■□□□□ 0
HDAC7-226ENST00000547259 USP17L3A6NCW0 530 aa15.06■□□□□ 0
HDAC7-226ENST00000547259 USP17L4A6NCW7 530 aa15.06■□□□□ 0
HDAC7-226ENST00000547259 FAM155AB1AL88 458 aaPredicted RBP15.06■□□□□ 0
HDAC7-226ENST00000547259 ADM5C9JUS6 153 aa15.06■□□□□ 0
HDAC7-226ENST00000547259 CASP7P55210 303 aa15.06■□□□□ 0
HDAC7-226ENST00000547259 KIF23Q02241 960 aaPredicted RBP15.06■□□□□ 0
HDAC7-226ENST00000547259 USP17L1Q7RTZ2 530 aa15.06■□□□□ 0
HDAC7-226ENST00000547259 OGFOD1Q8N543 542 aa15.06■□□□□ 0
HDAC7-226ENST00000547259 HDAC5Q9UQL6 1122 aa15.06■□□□□ 0
HDAC7-226ENST00000547259 LRRFIP2Q9Y608 721 aaKnown RBP15.06■□□□□ 0
HDAC7-226ENST00000547259 SPEF2Q9C093 1822 aa15.06■□□□□ 0
HDAC7-226ENST00000547259 EGFRP00533 1210 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 GNAI2P04899 355 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 SLC10A3P09131 477 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 SCARF1Q14162 830 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 CDCA5Q96FF9 252 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 SUCLG2Q96I99 432 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 C1orf115Q9H7X2 142 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 MYOZ2Q9NPC6 264 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 BSDC1Q9NW68 430 aaPredicted RBP15.05■□□□□ -0
HDAC7-226ENST00000547259 MYO3BQ8WXR4 1341 aa15.05■□□□□ -0
HDAC7-226ENST00000547259 CTSWP56202 376 aa15.04■□□□□ -0
HDAC7-226ENST00000547259 ZBTB40Q9NUA8 1239 aa15.04■□□□□ -0
HDAC7-226ENST00000547259 NF2P35240 595 aa15.03■□□□□ -0
HDAC7-226ENST00000547259 ANGEL2Q5VTE6 544 aaKnown RBP15.03■□□□□ -0
HDAC7-226ENST00000547259 RNF186Q9NXI6 227 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms