RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 UFL1O94874 794 aa19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 UQCRFS1P1P0C7P4 283 aa19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 BMP2KLQ5H9B9 411 aa19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 TTC39AQ5SRH9 613 aa19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 TTC22Q5TAA0 569 aa19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 C15orf52Q6ZUT6 534 aaKnown RBP19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 RTKN2Q8IZC4 609 aa19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 C7orf43Q8WVR3 580 aa19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 ZNF512BQ96KM6 892 aaPredicted RBP19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 GNL3LQ9NVN8 582 aaKnown RBP19.33■□□□□ 0.68
TRAFD1-203ENST00000547063 CCDC93Q567U6 631 aa19.32■□□□□ 0.68
TRAFD1-203ENST00000547063 VPS37DQ86XT2 251 aa19.32■□□□□ 0.68
TRAFD1-203ENST00000547063 SUPT20HQ8NEM7 779 aa19.32■□□□□ 0.68
TRAFD1-203ENST00000547063 EYA3Q99504 573 aa19.32■□□□□ 0.68
TRAFD1-203ENST00000547063 BRCA1P38398 1863 aaKnown RBP19.32■□□□□ 0.68
TRAFD1-203ENST00000547063 LTBP1Q14766 1721 aa19.31■□□□□ 0.68
TRAFD1-203ENST00000547063 C6orf229H3BNL8 230 aa19.31■□□□□ 0.68
TRAFD1-203ENST00000547063 ADORA1P30542 326 aa19.31■□□□□ 0.68
TRAFD1-203ENST00000547063 TBC1D16Q8TBP0 767 aa19.31■□□□□ 0.68
TRAFD1-203ENST00000547063 PI4K2BQ8TCG2 481 aa19.31■□□□□ 0.68
TRAFD1-203ENST00000547063 C21orf2O43822 256 aa19.3■□□□□ 0.68
TRAFD1-203ENST00000547063 CCDC102BQ68D86 513 aa19.3■□□□□ 0.68
TRAFD1-203ENST00000547063 ZNF804AQ7Z570 1209 aa19.3■□□□□ 0.68
TRAFD1-203ENST00000547063 FHDC1Q9C0D6 1143 aaPredicted RBP19.3■□□□□ 0.68
TRAFD1-203ENST00000547063 MED23Q9ULK4 1368 aa19.3■□□□□ 0.68
TRAFD1-203ENST00000547063 SNAP23O00161 211 aa19.29■□□□□ 0.68
TRAFD1-203ENST00000547063 ZBTB22O15209 634 aa19.29■□□□□ 0.68
TRAFD1-203ENST00000547063 ARID4AP29374 1257 aaPredicted RBP19.29■□□□□ 0.68
TRAFD1-203ENST00000547063 HIBADHP31937 336 aaKnown RBP19.29■□□□□ 0.68
TRAFD1-203ENST00000547063 RTFDC1Q9BY42 306 aaPredicted RBP19.29■□□□□ 0.68
TRAFD1-203ENST00000547063 SEMA3EO15041 775 aa19.28■□□□□ 0.68
TRAFD1-203ENST00000547063 TSHZ3Q63HK5 1081 aa19.28■□□□□ 0.68
TRAFD1-203ENST00000547063 FBXO33Q7Z6M2 555 aa19.28■□□□□ 0.68
TRAFD1-203ENST00000547063 FAM84BQ96KN1 310 aaPredicted RBP19.28■□□□□ 0.68
TRAFD1-203ENST00000547063 ZC3H12CQ9C0D7 883 aaKnown RBP19.28■□□□□ 0.68
TRAFD1-203ENST00000547063 ZNF219Q9P2Y4 722 aaPredicted RBP19.28■□□□□ 0.68
TRAFD1-203ENST00000547063 POLLQ9UGP5 575 aa19.28■□□□□ 0.68
TRAFD1-203ENST00000547063 PHKA1P46020 1223 aa19.27■□□□□ 0.68
TRAFD1-203ENST00000547063 BCAMP50895 628 aa19.27■□□□□ 0.68
TRAFD1-203ENST00000547063 CNTROBQ8N137 903 aa19.27■□□□□ 0.68
TRAFD1-203ENST00000547063 NLGN2Q8NFZ4 835 aa19.27■□□□□ 0.68
TRAFD1-203ENST00000547063 PSMD1Q99460 953 aa19.27■□□□□ 0.68
TRAFD1-203ENST00000547063 HAUS7Q99871 368 aa19.27■□□□□ 0.68
TRAFD1-203ENST00000547063 VPS33BQ9H267 617 aa19.27■□□□□ 0.68
TRAFD1-203ENST00000547063 BOLA2Q9H3K6 86 aa19.27■□□□□ 0.68
TRAFD1-203ENST00000547063 IRS2Q9Y4H2 1338 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 TRIM6-TRIM34B2RNG4 842 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 GSPT1P15170 499 aaKnown RBP19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 GYG1P46976 350 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 WASHC4Q2M389 1173 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 TICAM2Q86XR7 235 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 EVI5LQ96CN4 794 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 SYT17Q9BSW7 474 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 DENND2AQ9ULE3 1009 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 BCS1LQ9Y276 419 aa19.26■□□□□ 0.67
TRAFD1-203ENST00000547063 ARFGEF1Q9Y6D6 1849 aa19.25■□□□□ 0.67
TRAFD1-203ENST00000547063 DUOX1Q9NRD9 1551 aa19.25■□□□□ 0.67
TRAFD1-203ENST00000547063 FRAT2O75474 233 aaPredicted RBP19.25■□□□□ 0.67
TRAFD1-203ENST00000547063 TTF1Q15361 905 aaPredicted RBP19.25■□□□□ 0.67
TRAFD1-203ENST00000547063 OLFM4Q6UX06 510 aa19.25■□□□□ 0.67
TRAFD1-203ENST00000547063 SNED1Q8TER0 1413 aa19.25■□□□□ 0.67
TRAFD1-203ENST00000547063 PDS5AQ29RF7 1337 aaKnown RBP19.25■□□□□ 0.67
TRAFD1-203ENST00000547063 WTIPA6NIX2 430 aaPredicted RBP19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 G3V3G9 751 aa19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 SDSP20132 328 aa19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 LRRFIP1Q32MZ4 808 aaKnown RBP19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 DCAF8Q5TAQ9 597 aa19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 RILPL2Q969X0 211 aa19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 DNAJC2Q99543 621 aaKnown RBP19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 COA1Q9GZY4 146 aa19.24■□□□□ 0.67
TRAFD1-203ENST00000547063 AK9Q5TCS8 1911 aa19.23■□□□□ 0.67
TRAFD1-203ENST00000547063 KLRK1P26718 216 aa19.23■□□□□ 0.67
TRAFD1-203ENST00000547063 MCAMP43121 646 aa19.23■□□□□ 0.67
TRAFD1-203ENST00000547063 CASC1Q6TDU7 716 aa19.23■□□□□ 0.67
TRAFD1-203ENST00000547063 SLC51AQ86UW1 340 aa19.23■□□□□ 0.67
TRAFD1-203ENST00000547063 TXNRD3Q86VQ6 643 aa19.23■□□□□ 0.67
TRAFD1-203ENST00000547063 SPATA5Q8NB90 893 aa19.23■□□□□ 0.67
TRAFD1-203ENST00000547063 PAG1Q9NWQ8 432 aa19.23■□□□□ 0.67
TRAFD1-203ENST00000547063 MYH13Q9UKX3 1938 aa19.22■□□□□ 0.67
TRAFD1-203ENST00000547063 EIF5BO60841 1220 aaKnown RBP19.22■□□□□ 0.67
TRAFD1-203ENST00000547063 IL1R1P14778 569 aa19.22■□□□□ 0.67
TRAFD1-203ENST00000547063 RASGRF1Q13972 1273 aa19.22■□□□□ 0.67
TRAFD1-203ENST00000547063 TDRD7Q8NHU6 1098 aaKnown RBP19.22■□□□□ 0.67
TRAFD1-203ENST00000547063 AKAP11Q9UKA4 1901 aa19.21■□□□□ 0.67
TRAFD1-203ENST00000547063 HIP1O00291 1037 aa19.21■□□□□ 0.67
TRAFD1-203ENST00000547063 IGSF3O75054 1194 aa19.21■□□□□ 0.67
TRAFD1-203ENST00000547063 KIAA2012Q0VF49 1180 aa19.21■□□□□ 0.67
TRAFD1-203ENST00000547063 TAOK3Q9H2K8 898 aa19.21■□□□□ 0.67
TRAFD1-203ENST00000547063 CD209Q9NNX6 404 aa19.21■□□□□ 0.67
TRAFD1-203ENST00000547063 HMG20BQ9P0W2 317 aa19.21■□□□□ 0.67
TRAFD1-203ENST00000547063 LTBP3Q9NS15 1303 aa19.21■□□□□ 0.67
TRAFD1-203ENST00000547063 RFX7Q2KHR2 1363 aa19.2■□□□□ 0.66
TRAFD1-203ENST00000547063 FER1L6Q2WGJ9 1857 aa19.2■□□□□ 0.66
TRAFD1-203ENST00000547063 GOLIM4O00461 696 aa19.2■□□□□ 0.66
TRAFD1-203ENST00000547063 RIMBP2O15034 1052 aa19.2■□□□□ 0.66
TRAFD1-203ENST00000547063 CDC45O75419 566 aa19.2■□□□□ 0.66
TRAFD1-203ENST00000547063 ZAP70P43403 619 aa19.2■□□□□ 0.66
TRAFD1-203ENST00000547063 SCARF1Q14162 830 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms