RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 G3BP1Q13283 466 aaKnown RBP eCLIP20.85■□□□□ 0.93
CCDC38-203ENST00000546803 HMMRO75330 724 aa20.84■□□□□ 0.93
CCDC38-203ENST00000546803 RAD17O75943 681 aa20.84■□□□□ 0.93
CCDC38-203ENST00000546803 IFIT1P09914 478 aaKnown RBP20.84■□□□□ 0.93
CCDC38-203ENST00000546803 ZNF804AQ7Z570 1209 aa20.84■□□□□ 0.93
CCDC38-203ENST00000546803 LPIN2Q92539 896 aa20.84■□□□□ 0.93
CCDC38-203ENST00000546803 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
CCDC38-203ENST00000546803 SUPT16HQ9Y5B9 1047 aaKnown RBP20.84■□□□□ 0.93
CCDC38-203ENST00000546803 GJA3Q9Y6H8 435 aa20.84■□□□□ 0.93
CCDC38-203ENST00000546803 VEGFAP15692 232 aaPredicted RBP20.83■□□□□ 0.93
CCDC38-203ENST00000546803 FGFR2P21802 821 aa20.83■□□□□ 0.93
CCDC38-203ENST00000546803 RRAGCQ9HB90 399 aa20.83■□□□□ 0.93
CCDC38-203ENST00000546803 NMRK2Q9NPI5 230 aa20.83■□□□□ 0.93
CCDC38-203ENST00000546803 DICER1Q9UPY3 1922 aaKnown RBP20.82■□□□□ 0.92
CCDC38-203ENST00000546803 TIAM2Q8IVF5 1701 aa20.82■□□□□ 0.92
CCDC38-203ENST00000546803 IQCA1LA6NCM1 817 aa20.82■□□□□ 0.92
CCDC38-203ENST00000546803 SURF6O75683 361 aaKnown RBP20.82■□□□□ 0.92
CCDC38-203ENST00000546803 SLC5A1P13866 664 aa20.82■□□□□ 0.92
CCDC38-203ENST00000546803 CD209Q9NNX6 404 aa20.82■□□□□ 0.92
CCDC38-203ENST00000546803 PSMD14O00487 310 aa20.81■□□□□ 0.92
CCDC38-203ENST00000546803 HIBADHP31937 336 aaKnown RBP20.81■□□□□ 0.92
CCDC38-203ENST00000546803 CAVIN4Q5BKX8 364 aa20.81■□□□□ 0.92
CCDC38-203ENST00000546803 CRBNQ96SW2 442 aa20.81■□□□□ 0.92
CCDC38-203ENST00000546803 AKAP2Q9Y2D5 859 aa20.81■□□□□ 0.92
CCDC38-203ENST00000546803 USP17L3A6NCW0 530 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 USP17L4A6NCW7 530 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 VIL1P09327 827 aaKnown RBP20.8■□□□□ 0.92
CCDC38-203ENST00000546803 IL1R1P14778 569 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 OS9Q13438 667 aaPredicted RBP20.8■□□□□ 0.92
CCDC38-203ENST00000546803 AAMPQ13685 434 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 ATP2B3Q16720 1220 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 HSP90AB4PQ58FF6 505 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 USP17L1Q7RTZ2 530 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 FBXO33Q7Z6M2 555 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 FAM84BQ96KN1 310 aaPredicted RBP20.8■□□□□ 0.92
CCDC38-203ENST00000546803 KCNQ5Q9NR82 932 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 SPEF2Q9C093 1822 aa20.8■□□□□ 0.92
CCDC38-203ENST00000546803 CCDC88AQ3V6T2 1871 aa20.79■□□□□ 0.92
CCDC38-203ENST00000546803 POTECB2RU33 542 aa20.79■□□□□ 0.92
CCDC38-203ENST00000546803 KIF3CO14782 793 aa20.79■□□□□ 0.92
CCDC38-203ENST00000546803 RPS12P25398 132 aaKnown RBP20.79■□□□□ 0.92
CCDC38-203ENST00000546803 LMOD1P29536 600 aaPredicted RBP20.79■□□□□ 0.92
CCDC38-203ENST00000546803 TFCP2Q12800 502 aa20.79■□□□□ 0.92
CCDC38-203ENST00000546803 VPS37DQ86XT2 251 aa20.79■□□□□ 0.92
CCDC38-203ENST00000546803 SIRT2Q8IXJ6 389 aa20.79■□□□□ 0.92
CCDC38-203ENST00000546803 HACL1Q9UJ83 578 aa20.79■□□□□ 0.92
CCDC38-203ENST00000546803 GYG1P46976 350 aa20.78■□□□□ 0.92
CCDC38-203ENST00000546803 GMPSP49915 693 aaPredicted RBP20.78■□□□□ 0.92
CCDC38-203ENST00000546803 SCNN1DP51172 638 aa20.78■□□□□ 0.92
CCDC38-203ENST00000546803 STRIP1Q5VSL9 837 aa20.78■□□□□ 0.92
CCDC38-203ENST00000546803 DPF2Q92785 391 aa20.78■□□□□ 0.92
CCDC38-203ENST00000546803 SASH1O94885 1247 aa20.77■□□□□ 0.92
CCDC38-203ENST00000546803 TTLL5Q6EMB2 1281 aa20.77■□□□□ 0.92
CCDC38-203ENST00000546803 RSBN1LQ6PCB5 846 aaPredicted RBP20.77■□□□□ 0.92
CCDC38-203ENST00000546803 ERC1Q8IUD2 1116 aa20.77■□□□□ 0.92
CCDC38-203ENST00000546803 AGBL3Q8NEM8 1001 aa20.77■□□□□ 0.92
CCDC38-203ENST00000546803 TDRD7Q8NHU6 1098 aaKnown RBP20.77■□□□□ 0.92
CCDC38-203ENST00000546803 GPR108Q9NPR9 543 aa20.77■□□□□ 0.92
CCDC38-203ENST00000546803 C16orf71Q8IYS4 520 aaPredicted RBP20.76■□□□□ 0.91
CCDC38-203ENST00000546803 TAF1DQ9H5J8 278 aaPredicted RBP20.76■□□□□ 0.91
CCDC38-203ENST00000546803 GPRC5DQ9NZD1 345 aa20.76■□□□□ 0.91
CCDC38-203ENST00000546803 ZBTB12Q9Y330 459 aaPredicted RBP20.76■□□□□ 0.91
CCDC38-203ENST00000546803 WDR90Q96KV7 1748 aa20.75■□□□□ 0.91
CCDC38-203ENST00000546803 A0A1B0GUL7 405 aa20.75■□□□□ 0.91
CCDC38-203ENST00000546803 EPHX2P34913 555 aa20.75■□□□□ 0.91
CCDC38-203ENST00000546803 BCAMP50895 628 aa20.75■□□□□ 0.91
CCDC38-203ENST00000546803 GTF2IP78347 998 aa20.75■□□□□ 0.91
CCDC38-203ENST00000546803 DACT2Q5SW24 774 aa20.75■□□□□ 0.91
CCDC38-203ENST00000546803 ZNF609O15014 1411 aa20.75■□□□□ 0.91
CCDC38-203ENST00000546803 MYO3BQ8WXR4 1341 aa20.75■□□□□ 0.91
CCDC38-203ENST00000546803 TIMM10P62072 90 aa20.74■□□□□ 0.91
CCDC38-203ENST00000546803 PNMA8AQ86V59 439 aaPredicted RBP20.74■□□□□ 0.91
CCDC38-203ENST00000546803 FBXW7Q969H0 707 aa20.74■□□□□ 0.91
CCDC38-203ENST00000546803 GNL3LQ9NVN8 582 aaKnown RBP20.74■□□□□ 0.91
CCDC38-203ENST00000546803 CNOT7Q9UIV1 285 aaKnown RBP20.74■□□□□ 0.91
CCDC38-203ENST00000546803 EXOC6BQ9Y2D4 811 aa20.74■□□□□ 0.91
CCDC38-203ENST00000546803 H7C1D1 291 aa20.73■□□□□ 0.91
CCDC38-203ENST00000546803 ZBTB22O15209 634 aa20.73■□□□□ 0.91
CCDC38-203ENST00000546803 RAB11FIP3O75154 756 aa20.73■□□□□ 0.91
CCDC38-203ENST00000546803 TOMM70O94826 608 aa20.73■□□□□ 0.91
CCDC38-203ENST00000546803 EPS15P42566 896 aa20.73■□□□□ 0.91
CCDC38-203ENST00000546803 FKBP1AP62942 108 aaKnown RBP20.73■□□□□ 0.91
CCDC38-203ENST00000546803 GMLQ99445 158 aa20.73■□□□□ 0.91
CCDC38-203ENST00000546803 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.73■□□□□ 0.91
CCDC38-203ENST00000546803 FAM205AQ6ZU69 1335 aa20.73■□□□□ 0.91
CCDC38-203ENST00000546803 FRAT2O75474 233 aaPredicted RBP20.72■□□□□ 0.91
CCDC38-203ENST00000546803 MMP14P50281 582 aa20.72■□□□□ 0.91
CCDC38-203ENST00000546803 MICALL2Q8IY33 904 aa20.72■□□□□ 0.91
CCDC38-203ENST00000546803 XAGE2Q96GT9 111 aa20.72■□□□□ 0.91
CCDC38-203ENST00000546803 NEUROD6Q96NK8 337 aa20.72■□□□□ 0.91
CCDC38-203ENST00000546803 ADARB2Q9NS39 739 aaKnown RBP20.72■□□□□ 0.91
CCDC38-203ENST00000546803 PCDHB15Q9Y5E8 787 aa20.72■□□□□ 0.91
CCDC38-203ENST00000546803 TNNI3KQ59H18 835 aa20.71■□□□□ 0.91
CCDC38-203ENST00000546803 USP50Q70EL3 339 aaPredicted RBP20.71■□□□□ 0.91
CCDC38-203ENST00000546803 RBM46Q8TBY0 533 aaKnown RBP20.71■□□□□ 0.91
CCDC38-203ENST00000546803 RHPN1Q8TCX5 695 aa20.71■□□□□ 0.91
CCDC38-203ENST00000546803 KIF1BPQ96EK5 621 aa20.71■□□□□ 0.91
CCDC38-203ENST00000546803 FPGT-TNNI3KV9GXZ4 949 aa20.71■□□□□ 0.91
CCDC38-203ENST00000546803 A0A1B0GUL6 1792 aa20.71■□□□□ 0.91
CCDC38-203ENST00000546803 SEMA3EO15041 775 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms