RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TXNRD3Q86VQ6 643 aa16.18■□□□□ 0.18
COPS7A-221ENST00000546229 MYOZ2Q9NPC6 264 aa16.18■□□□□ 0.18
COPS7A-221ENST00000546229 USP17L3A6NCW0 530 aa16.17■□□□□ 0.18
COPS7A-221ENST00000546229 USP17L4A6NCW7 530 aa16.17■□□□□ 0.18
COPS7A-221ENST00000546229 NCBP3Q53F19 620 aaKnown RBP16.17■□□□□ 0.18
COPS7A-221ENST00000546229 USP17L1Q7RTZ2 530 aa16.17■□□□□ 0.18
COPS7A-221ENST00000546229 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
COPS7A-221ENST00000546229 C2orf69Q8N8R5 385 aa16.17■□□□□ 0.18
COPS7A-221ENST00000546229 CDC5LQ99459 802 aaKnown RBP16.17■□□□□ 0.18
COPS7A-221ENST00000546229 MXD3Q9BW11 206 aa16.17■□□□□ 0.18
COPS7A-221ENST00000546229 USP17L8P0C7I0 530 aa16.16■□□□□ 0.18
COPS7A-221ENST00000546229 CCT4P50991 539 aaKnown RBP16.16■□□□□ 0.18
COPS7A-221ENST00000546229 TWISTNBQ3B726 338 aaPredicted RBP16.16■□□□□ 0.18
COPS7A-221ENST00000546229 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
COPS7A-221ENST00000546229 CCDC102AQ96A19 550 aa16.16■□□□□ 0.18
COPS7A-221ENST00000546229 ZBED3Q96IU2 234 aaPredicted RBP16.16■□□□□ 0.18
COPS7A-221ENST00000546229 CSRNP1Q96S65 589 aa16.16■□□□□ 0.18
COPS7A-221ENST00000546229 RNF186Q9NXI6 227 aa16.16■□□□□ 0.18
COPS7A-221ENST00000546229 ECM29Q5VYK3 1845 aa16.16■□□□□ 0.18
COPS7A-221ENST00000546229 FANCIQ9NVI1 1328 aa16.16■□□□□ 0.18
COPS7A-221ENST00000546229 CSF1RP07333 972 aa16.15■□□□□ 0.18
COPS7A-221ENST00000546229 ZNF157P51786 506 aaPredicted RBP16.15■□□□□ 0.18
COPS7A-221ENST00000546229 GCKRQ14397 625 aa16.15■□□□□ 0.18
COPS7A-221ENST00000546229 NBPF9Q3BBW0 867 aa16.15■□□□□ 0.18
COPS7A-221ENST00000546229 SCAF8Q9UPN6 1271 aaKnown RBP16.15■□□□□ 0.18
COPS7A-221ENST00000546229 SSC5DA1L4H1 1573 aa16.14■□□□□ 0.17
COPS7A-221ENST00000546229 CCDC85CA6NKD9 419 aa16.14■□□□□ 0.17
COPS7A-221ENST00000546229 FKBP1BP68106 108 aa16.14■□□□□ 0.17
COPS7A-221ENST00000546229 FLIIQ13045 1269 aa16.14■□□□□ 0.17
COPS7A-221ENST00000546229 MOB2Q70IA6 237 aa16.14■□□□□ 0.17
COPS7A-221ENST00000546229 CHMP4AQ9BY43 222 aa16.14■□□□□ 0.17
COPS7A-221ENST00000546229 WNT10BO00744 389 aa16.13■□□□□ 0.17
COPS7A-221ENST00000546229 DGKZQ13574 1117 aa16.13■□□□□ 0.17
COPS7A-221ENST00000546229 STRIP1Q5VSL9 837 aa16.13■□□□□ 0.17
COPS7A-221ENST00000546229 ARAP2Q8WZ64 1704 aa16.13■□□□□ 0.17
COPS7A-221ENST00000546229 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
COPS7A-221ENST00000546229 ITGA6P23229 1130 aa16.12■□□□□ 0.17
COPS7A-221ENST00000546229 NEXNQ0ZGT2 675 aa16.12■□□□□ 0.17
COPS7A-221ENST00000546229 STK31Q9BXU1 1019 aa16.12■□□□□ 0.17
COPS7A-221ENST00000546229 COA1Q9GZY4 146 aa16.12■□□□□ 0.17
COPS7A-221ENST00000546229 LEMD3Q9Y2U8 911 aa16.12■□□□□ 0.17
COPS7A-221ENST00000546229 MYO3BQ8WXR4 1341 aa16.12■□□□□ 0.17
COPS7A-221ENST00000546229 LINS1Q8NG48 757 aa16.11■□□□□ 0.17
COPS7A-221ENST00000546229 ZNF804BA4D1E1 1349 aa16.11■□□□□ 0.17
COPS7A-221ENST00000546229 COL1A1P02452 1464 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-221ENST00000546229 G3V3G9 751 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 SNAP23O00161 211 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 VAMP4O75379 141 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 TRPA1O75762 1119 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 FOXO4P98177 505 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 MLLT1Q03111 559 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-221ENST00000546229 DCAF8Q5TAQ9 597 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 PRAMEF18Q5VWM3 479 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 C15orf52Q6ZUT6 534 aaKnown RBP16.1■□□□□ 0.17
COPS7A-221ENST00000546229 CERS5Q8N5B7 392 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 DNAAF4Q8WXU2 420 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-221ENST00000546229 BRCA2P51587 3418 aa16.1■□□□□ 0.17
COPS7A-221ENST00000546229 CENPFP49454 3210 aa16.09■□□□□ 0.17
COPS7A-221ENST00000546229 SASH1O94885 1247 aa16.09■□□□□ 0.17
COPS7A-221ENST00000546229 SLC34A2O95436 690 aa16.09■□□□□ 0.17
COPS7A-221ENST00000546229 CHRNDQ07001 517 aa16.09■□□□□ 0.17
COPS7A-221ENST00000546229 OTOFQ9HC10 1997 aa16.09■□□□□ 0.17
COPS7A-221ENST00000546229 BEND3Q5T5X7 828 aa16.08■□□□□ 0.16
COPS7A-221ENST00000546229 AOX1Q06278 1338 aa16.08■□□□□ 0.16
COPS7A-221ENST00000546229 MKI67P46013 3256 aaKnown RBP16.08■□□□□ 0.16
COPS7A-221ENST00000546229 UBE2Q2LH0YL09 131 aa16.07■□□□□ 0.16
COPS7A-221ENST00000546229 IGHMBP2P38935 993 aaKnown RBP16.07■□□□□ 0.16
COPS7A-221ENST00000546229 MMP14P50281 582 aa16.07■□□□□ 0.16
COPS7A-221ENST00000546229 FKBP5Q13451 457 aaPredicted RBP16.07■□□□□ 0.16
COPS7A-221ENST00000546229 EPHA10Q5JZY3 1008 aa16.07■□□□□ 0.16
COPS7A-221ENST00000546229 REM2Q8IYK8 340 aaPredicted RBP16.07■□□□□ 0.16
COPS7A-221ENST00000546229 PDE4DIPQ5VU43 2346 aa16.07■□□□□ 0.16
COPS7A-221ENST00000546229 LDLRAD1Q5T700 205 aa16.06■□□□□ 0.16
COPS7A-221ENST00000546229 KIAA0825Q8IV33 1275 aa16.06■□□□□ 0.16
COPS7A-221ENST00000546229 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
COPS7A-221ENST00000546229 MTMR14Q8NCE2 650 aa16.06■□□□□ 0.16
COPS7A-221ENST00000546229 ANKRD2Q9GZV1 360 aa16.06■□□□□ 0.16
COPS7A-221ENST00000546229 MYH16Q9H6N6 1097 aa16.06■□□□□ 0.16
COPS7A-221ENST00000546229 CD209Q9NNX6 404 aa16.06■□□□□ 0.16
COPS7A-221ENST00000546229 PCDHAC2Q9Y5I4 1007 aa16.06■□□□□ 0.16
COPS7A-221ENST00000546229 F6X3S4 739 aa16.05■□□□□ 0.16
COPS7A-221ENST00000546229 TM4SF4P48230 202 aa16.05■□□□□ 0.16
COPS7A-221ENST00000546229 GTF2IP78347 998 aa16.05■□□□□ 0.16
COPS7A-221ENST00000546229 EXOSC9Q06265 439 aaKnown RBP16.05■□□□□ 0.16
COPS7A-221ENST00000546229 NOM1Q5C9Z4 860 aaKnown RBP16.05■□□□□ 0.16
COPS7A-221ENST00000546229 TTLL5Q6EMB2 1281 aa16.05■□□□□ 0.16
COPS7A-221ENST00000546229 CTU1Q7Z7A3 348 aaKnown RBP16.05■□□□□ 0.16
COPS7A-221ENST00000546229 CFHR5Q9BXR6 569 aa16.05■□□□□ 0.16
COPS7A-221ENST00000546229 IL1R1P14778 569 aa16.04■□□□□ 0.16
COPS7A-221ENST00000546229 PTPN12Q05209 780 aaKnown RBP16.04■□□□□ 0.16
COPS7A-221ENST00000546229 APOBEC3FQ8IUX4 373 aaKnown RBP16.04■□□□□ 0.16
COPS7A-221ENST00000546229 OGFOD1Q8N543 542 aa16.04■□□□□ 0.16
COPS7A-221ENST00000546229 TAF5LO75529 589 aa16.03■□□□□ 0.16
COPS7A-221ENST00000546229 MAP3K11Q16584 847 aa16.03■□□□□ 0.16
COPS7A-221ENST00000546229 KAZALD1Q96I82 304 aa16.03■□□□□ 0.16
COPS7A-221ENST00000546229 MPHOSPH8Q99549 860 aa16.03■□□□□ 0.16
COPS7A-221ENST00000546229 R3HDMLQ9H3Y0 253 aa16.03■□□□□ 0.16
COPS7A-221ENST00000546229 FZD1Q9UP38 647 aa16.03■□□□□ 0.16
COPS7A-221ENST00000546229 ZNF521Q96K83 1311 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms