RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	B4GALNT4	Q76KP1	1039 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	TMC6	Q7Z403	805 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	CCDC50	Q8IVM0	306 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	FBXL16	Q8N461	479 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	CXorf56	Q9H5V9	222 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	RTEL1	Q9NZ71	1219 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	STAG3	Q9UJ98	1225 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	TPCN1	Q9ULQ1	816 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	L1RE1	Q9UN81	338 aa		11.72	□□□□□ -0.53
UBC-213	ENST00000546120	N4BP2	Q86UW6	1770 aa	Predicted RBP	11.72	□□□□□ -0.53
UBC-213	ENST00000546120	JCAD	Q9P266	1359 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	MAP3K15	Q6ZN16	1313 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	SURF6	O75683	361 aa	Known RBP	11.71	□□□□□ -0.53
UBC-213	ENST00000546120	HMOX1	P09601	288 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	FLII	Q13045	1269 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.71	□□□□□ -0.53
UBC-213	ENST00000546120	PRPF40B	Q6NWY9	871 aa	Known RBP	11.71	□□□□□ -0.53
UBC-213	ENST00000546120	WDR93	Q6P2C0	686 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	SLC4A10	Q6U841	1118 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	MICALCL	Q6ZW33	695 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	BRAP	Q7Z569	592 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	WAPL	Q7Z5K2	1190 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	TAX1BP1	Q86VP1	789 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.71	□□□□□ -0.53
UBC-213	ENST00000546120	AOPEP	Q8N6M6	819 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	JMY	Q8N9B5	988 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	CCDC51	Q96ER9	411 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	PRAM1	Q96QH2	718 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	THUMPD2	Q9BTF0	503 aa	Known RBP	11.71	□□□□□ -0.53
UBC-213	ENST00000546120	ST7	Q9NRC1	585 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	CABP1	Q9NZU7	370 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	CDC23	Q9UJX2	597 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120	GGA2	Q9UJY4	613 aa		11.71	□□□□□ -0.53
UBC-213	ENST00000546120		U3KPZ7	1027 aa	Predicted RBP	11.71	□□□□□ -0.53
UBC-213	ENST00000546120	SRRM3	A6NNA2	597 aa	Predicted RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	SOX12	O15370	315 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	C21orf2	O43822	256 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	SLC3A2	P08195	630 aa	Known RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	TOP1	P11387	765 aa	Known RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	CHMP4BP1	P59074	171 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	GNL2	Q13823	731 aa	Known RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	LARP1	Q6PKG0	1096 aa	Known RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	CWC27	Q6UX04	472 aa	Known RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	VSTM4	Q8IW00	320 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	MICALL1	Q8N3F8	863 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	ANKRD24	Q8TF21	1146 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	CCDC34	Q96HJ3	373 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	PANX2	Q96RD6	677 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	XPO4	Q9C0E2	1151 aa	Known RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	IFNK	Q9P0W0	207 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	TSPYL4	Q9UJ04	414 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	PPP2R2C	Q9Y2T4	447 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	RBM8A	Q9Y5S9	174 aa	Known RBP	11.7	□□□□□ -0.54
UBC-213	ENST00000546120	SPATA31D1	Q6ZQQ2	1576 aa		11.7	□□□□□ -0.54
UBC-213	ENST00000546120	FER1L4	A9Z1Z3	1794 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	EBAG9	O00559	213 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	SLC27A2	O14975	620 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	KIF5C	O60282	957 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	PFKFB2	O60825	505 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	ALDH1L1	O75891	902 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	ERLIN2	O94905	339 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	CCDC175	P0C221	793 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	CMA1	P23946	247 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	AMPH	P49418	695 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	GNG11	P61952	73 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	FANCC	Q00597	558 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	MYL5	Q02045	173 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	OLFM4	Q6UX06	510 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	YTHDF3	Q7Z739	585 aa	Known RBP	11.69	□□□□□ -0.54
UBC-213	ENST00000546120	ARHGEF25	Q86VW2	580 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	NFATC2IP	Q8NCF5	419 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	BANK1	Q8NDB2	785 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	POLR3E	Q9NVU0	708 aa		11.69	□□□□□ -0.54
UBC-213	ENST00000546120	TFIP11	Q9UBB9	837 aa	Known RBP	11.69	□□□□□ -0.54
UBC-213	ENST00000546120	CACNA1F	O60840	1977 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	DIP2C	Q9Y2E4	1556 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	LOC102724159	A0A0B4J2E5	919 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	PNMA6E	A0A0J9YXQ4	647 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	SHTN1	A0MZ66	631 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	NUTM2F	A1L443	756 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	TARSL2	A2RTX5	802 aa	Known RBP	11.68	□□□□□ -0.54
UBC-213	ENST00000546120	TRIM66	O15016	1216 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	SHOX2	O60902	331 aa	Predicted RBP	11.68	□□□□□ -0.54
UBC-213	ENST00000546120	SASH3	O75995	380 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	LARGE1	O95461	756 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	IFIT2	P09913	472 aa	Known RBP	11.68	□□□□□ -0.54
UBC-213	ENST00000546120	NBPF7	P0C2Y1	421 aa	Predicted RBP	11.68	□□□□□ -0.54
UBC-213	ENST00000546120	ARHGAP25	P42331	645 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	UBASH3A	P57075	661 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	DRP2	Q13474	957 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	PLCB4	Q15147	1175 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	PWP2	Q15269	919 aa	Known RBP	11.68	□□□□□ -0.54
UBC-213	ENST00000546120	HSP90AB3P	Q58FF7	597 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	NUTM2G	Q5VZR2	741 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	PACS2	Q86VP3	889 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	UNC5CL	Q8IV45	518 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	FSIP1	Q8NA03	581 aa		11.68	□□□□□ -0.54
UBC-213	ENST00000546120	BAG1	Q99933	345 aa	Predicted RBP	11.68	□□□□□ -0.54
UBC-213	ENST00000546120	USP44	Q9H0E7	712 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms