RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 USP17L4A6NCW7 530 aa21.62■■□□□ 1.05
CD9-211ENST00000546073 HIBADHP31937 336 aaKnown RBP21.62■■□□□ 1.05
CD9-211ENST00000546073 C20orf194Q5TEA3 1177 aa21.62■■□□□ 1.05
CD9-211ENST00000546073 C15orf52Q6ZUT6 534 aaKnown RBP21.62■■□□□ 1.05
CD9-211ENST00000546073 USP17L1Q7RTZ2 530 aa21.62■■□□□ 1.05
CD9-211ENST00000546073 ZBTB40Q9NUA8 1239 aa21.62■■□□□ 1.05
CD9-211ENST00000546073 LRRC37AA6NMS7 1700 aa21.62■■□□□ 1.05
CD9-211ENST00000546073 ZNF541Q9H0D2 1346 aa21.61■■□□□ 1.05
CD9-211ENST00000546073 PNMA6EA0A0J9YXQ4 647 aa21.61■■□□□ 1.05
CD9-211ENST00000546073 H7C1D1 291 aa21.61■■□□□ 1.05
CD9-211ENST00000546073 RPS12P25398 132 aaKnown RBP21.61■■□□□ 1.05
CD9-211ENST00000546073 GORABQ5T7V8 394 aa21.61■■□□□ 1.05
CD9-211ENST00000546073 CEP85Q6P2H3 762 aa21.61■■□□□ 1.05
CD9-211ENST00000546073 ERC1Q8IUD2 1116 aa21.61■■□□□ 1.05
CD9-211ENST00000546073 SSH3Q8TE77 659 aa21.61■■□□□ 1.05
CD9-211ENST00000546073 AAMPQ13685 434 aa21.6■■□□□ 1.05
CD9-211ENST00000546073 ATP2B3Q16720 1220 aa21.6■■□□□ 1.05
CD9-211ENST00000546073 PNMA8AQ86V59 439 aaPredicted RBP21.6■■□□□ 1.05
CD9-211ENST00000546073 NMRK2Q9NPI5 230 aa21.6■■□□□ 1.05
CD9-211ENST00000546073 SUPT16HQ9Y5B9 1047 aaKnown RBP21.6■■□□□ 1.05
CD9-211ENST00000546073 SBF1O95248 1867 aa21.59■■□□□ 1.05
CD9-211ENST00000546073 POLA2Q14181 598 aa21.59■■□□□ 1.05
CD9-211ENST00000546073 TTLL5Q6EMB2 1281 aa21.59■■□□□ 1.05
CD9-211ENST00000546073 L3MBTL3Q96JM7 780 aaPredicted RBP21.59■■□□□ 1.05
CD9-211ENST00000546073 CD209Q9NNX6 404 aa21.59■■□□□ 1.05
CD9-211ENST00000546073 MYO3BQ8WXR4 1341 aa21.58■■□□□ 1.05
CD9-211ENST00000546073 ATG9AQ7Z3C6 839 aa21.58■■□□□ 1.05
CD9-211ENST00000546073 OGFOD1Q8N543 542 aa21.58■■□□□ 1.05
CD9-211ENST00000546073 NEUROD6Q96NK8 337 aa21.58■■□□□ 1.05
CD9-211ENST00000546073 CLEC11AQ9Y240 323 aa21.58■■□□□ 1.05
CD9-211ENST00000546073 UTRNP46939 3433 aa21.57■■□□□ 1.04
CD9-211ENST00000546073 PSMD14O00487 310 aa21.57■■□□□ 1.04
CD9-211ENST00000546073 STRIP1Q5VSL9 837 aa21.57■■□□□ 1.04
CD9-211ENST00000546073 DPF2Q92785 391 aa21.57■■□□□ 1.04
CD9-211ENST00000546073 ZBTB47Q9UFB7 747 aaPredicted RBP21.57■■□□□ 1.04
CD9-211ENST00000546073 TIAM2Q8IVF5 1701 aa21.56■■□□□ 1.04
CD9-211ENST00000546073 YDJCA8MPS7 323 aa21.56■■□□□ 1.04
CD9-211ENST00000546073 SNAP23O00161 211 aa21.56■■□□□ 1.04
CD9-211ENST00000546073 TOMM70O94826 608 aa21.56■■□□□ 1.04
CD9-211ENST00000546073 GMPSP49915 693 aaPredicted RBP21.56■■□□□ 1.04
CD9-211ENST00000546073 MMP14P50281 582 aa21.56■■□□□ 1.04
CD9-211ENST00000546073 EAPPQ56P03 285 aaPredicted RBP21.56■■□□□ 1.04
CD9-211ENST00000546073 RSBN1LQ6PCB5 846 aaPredicted RBP21.56■■□□□ 1.04
CD9-211ENST00000546073 AGBL3Q8NEM8 1001 aa21.56■■□□□ 1.04
CD9-211ENST00000546073 HDAC9Q9UKV0 1011 aa21.56■■□□□ 1.04
CD9-211ENST00000546073 VIL1P09327 827 aaKnown RBP21.55■■□□□ 1.04
CD9-211ENST00000546073 EPHX2P34913 555 aa21.55■■□□□ 1.04
CD9-211ENST00000546073 GYG1P46976 350 aa21.55■■□□□ 1.04
CD9-211ENST00000546073 GTF2IP78347 998 aa21.55■■□□□ 1.04
CD9-211ENST00000546073 TFCP2Q12800 502 aa21.55■■□□□ 1.04
CD9-211ENST00000546073 TXNRD3Q86VQ6 643 aa21.55■■□□□ 1.04
CD9-211ENST00000546073 CNOT7Q9UIV1 285 aaKnown RBP21.55■■□□□ 1.04
CD9-211ENST00000546073 DUOX1Q9NRD9 1551 aa21.55■■□□□ 1.04
CD9-211ENST00000546073 COL4A1P02462 1669 aa21.55■■□□□ 1.04
CD9-211ENST00000546073 CCDC88AQ3V6T2 1871 aa21.55■■□□□ 1.04
CD9-211ENST00000546073 WTIPA6NIX2 430 aaPredicted RBP21.54■■□□□ 1.04
CD9-211ENST00000546073 RAB11FIP3O75154 756 aa21.54■■□□□ 1.04
CD9-211ENST00000546073 SASH1O94885 1247 aa21.54■■□□□ 1.04
CD9-211ENST00000546073 CENPBP07199 599 aaPredicted RBP21.54■■□□□ 1.04
CD9-211ENST00000546073 IL1R1P14778 569 aa21.54■■□□□ 1.04
CD9-211ENST00000546073 VGLL2Q8N8G2 317 aa21.54■■□□□ 1.04
CD9-211ENST00000546073 CRBNQ96SW2 442 aa21.54■■□□□ 1.04
CD9-211ENST00000546073 ADARB2Q9NS39 739 aaKnown RBP21.54■■□□□ 1.04
CD9-211ENST00000546073 GPRC5DQ9NZD1 345 aa21.54■■□□□ 1.04
CD9-211ENST00000546073 NOP58Q9Y2X3 529 aaKnown RBP21.54■■□□□ 1.04
CD9-211ENST00000546073 DICER1Q9UPY3 1922 aaKnown RBP21.54■■□□□ 1.04
CD9-211ENST00000546073 SPEF2Q9C093 1822 aa21.54■■□□□ 1.04
CD9-211ENST00000546073 KLRK1P26718 216 aa21.53■■□□□ 1.04
CD9-211ENST00000546073 USP50Q70EL3 339 aaPredicted RBP21.53■■□□□ 1.04
CD9-211ENST00000546073 TBC1D22AQ8WUA7 517 aa21.53■■□□□ 1.04
CD9-211ENST00000546073 FAM84BQ96KN1 310 aaPredicted RBP21.53■■□□□ 1.04
CD9-211ENST00000546073 TAF1DQ9H5J8 278 aaPredicted RBP21.53■■□□□ 1.04
CD9-211ENST00000546073 A0A1B0GUL7 405 aa21.52■■□□□ 1.04
CD9-211ENST00000546073 FGFR2P21802 821 aa21.52■■□□□ 1.04
CD9-211ENST00000546073 CCDC158Q5M9N0 1113 aa21.52■■□□□ 1.04
CD9-211ENST00000546073 FBXO33Q7Z6M2 555 aa21.52■■□□□ 1.04
CD9-211ENST00000546073 SMC1BQ8NDV3 1235 aa21.52■■□□□ 1.04
CD9-211ENST00000546073 ZBTB12Q9Y330 459 aaPredicted RBP21.52■■□□□ 1.04
CD9-211ENST00000546073 KIF3CO14782 793 aa21.51■■□□□ 1.03
CD9-211ENST00000546073 USP17L8P0C7I0 530 aa21.51■■□□□ 1.03
CD9-211ENST00000546073 BCAMP50895 628 aa21.51■■□□□ 1.03
CD9-211ENST00000546073 MICALL2Q8IY33 904 aa21.51■■□□□ 1.03
CD9-211ENST00000546073 CLASRPQ8N2M8 674 aaKnown RBP21.51■■□□□ 1.03
CD9-211ENST00000546073 RBM46Q8TBY0 533 aaKnown RBP21.51■■□□□ 1.03
CD9-211ENST00000546073 KIF1BPQ96EK5 621 aa21.51■■□□□ 1.03
CD9-211ENST00000546073 GPR108Q9NPR9 543 aa21.51■■□□□ 1.03
CD9-211ENST00000546073 KCNQ5Q9NR82 932 aa21.51■■□□□ 1.03
CD9-211ENST00000546073 EXOC6BQ9Y2D4 811 aa21.51■■□□□ 1.03
CD9-211ENST00000546073 SCNN1DP51172 638 aa21.5■■□□□ 1.03
CD9-211ENST00000546073 TIMM10P62072 90 aa21.5■■□□□ 1.03
CD9-211ENST00000546073 CHAF1AQ13111 956 aaPredicted RBP21.5■■□□□ 1.03
CD9-211ENST00000546073 LDHDQ86WU2 507 aa21.5■■□□□ 1.03
CD9-211ENST00000546073 TDRD7Q8NHU6 1098 aaKnown RBP21.5■■□□□ 1.03
CD9-211ENST00000546073 DENND2AQ9ULE3 1009 aa21.5■■□□□ 1.03
CD9-211ENST00000546073 APBB1O00213 710 aa21.49■■□□□ 1.03
CD9-211ENST00000546073 SEMA3EO15041 775 aa21.49■■□□□ 1.03
CD9-211ENST00000546073 EPS15P42566 896 aa21.49■■□□□ 1.03
CD9-211ENST00000546073 FKBP1AP62942 108 aaKnown RBP21.49■■□□□ 1.03
CD9-211ENST00000546073 FSTL1Q12841 308 aa21.49■■□□□ 1.03
CD9-211ENST00000546073 WDR66Q8TBY9 1149 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms