RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 MINPP1Q9UNW1 487 aa19.12■□□□□ 0.65
RTN3-214ENST00000545432 ALDH1A1P00352 501 aa19.11■□□□□ 0.65
RTN3-214ENST00000545432 NF2P35240 595 aa19.11■□□□□ 0.65
RTN3-214ENST00000545432 INHBEP58166 350 aa19.11■□□□□ 0.65
RTN3-214ENST00000545432 GOLGA2Q08379 1002 aa19.11■□□□□ 0.65
RTN3-214ENST00000545432 NEUROD2Q15784 382 aa19.11■□□□□ 0.65
RTN3-214ENST00000545432 OGFOD1Q8N543 542 aa19.11■□□□□ 0.65
RTN3-214ENST00000545432 METTL22Q9BUU2 404 aaPredicted RBP19.11■□□□□ 0.65
RTN3-214ENST00000545432 LAS1LQ9Y4W2 734 aaKnown RBP19.11■□□□□ 0.65
RTN3-214ENST00000545432 HABP4Q5JVS0 413 aaKnown RBP19.1■□□□□ 0.65
RTN3-214ENST00000545432 INTS3Q68E01 1043 aaKnown RBP19.1■□□□□ 0.65
RTN3-214ENST00000545432 ARMC9Q7Z3E5 817 aa19.1■□□□□ 0.65
RTN3-214ENST00000545432 MYD88Q99836 296 aa19.1■□□□□ 0.65
RTN3-214ENST00000545432 COA1Q9GZY4 146 aa19.1■□□□□ 0.65
RTN3-214ENST00000545432 MBIPQ9NS73 344 aa19.1■□□□□ 0.65
RTN3-214ENST00000545432 CWC25Q9NXE8 425 aaPredicted RBP19.1■□□□□ 0.65
RTN3-214ENST00000545432 UNCXA6NJT0 531 aa19.09■□□□□ 0.65
RTN3-214ENST00000545432 TTLL11Q8NHH1 800 aa19.09■□□□□ 0.65
RTN3-214ENST00000545432 CDC5LQ99459 802 aaKnown RBP19.09■□□□□ 0.65
RTN3-214ENST00000545432 MXD3Q9BW11 206 aa19.09■□□□□ 0.65
RTN3-214ENST00000545432 CCT4P50991 539 aaKnown RBP19.08■□□□□ 0.64
RTN3-214ENST00000545432 ZNF646O15015 1829 aaPredicted RBP19.08■□□□□ 0.64
RTN3-214ENST00000545432 CTSWP56202 376 aa19.07■□□□□ 0.64
RTN3-214ENST00000545432 TTLL12Q14166 644 aaPredicted RBP19.07■□□□□ 0.64
RTN3-214ENST00000545432 TXNRD3Q86VQ6 643 aa19.07■□□□□ 0.64
RTN3-214ENST00000545432 APOBEC3FQ8IUX4 373 aaKnown RBP19.07■□□□□ 0.64
RTN3-214ENST00000545432 CCDC146Q8IYE0 955 aa19.07■□□□□ 0.64
RTN3-214ENST00000545432 JARID2Q92833 1246 aaPredicted RBP19.07■□□□□ 0.64
RTN3-214ENST00000545432 LEMD3Q9Y2U8 911 aa19.07■□□□□ 0.64
RTN3-214ENST00000545432 MANSC4A6NHS7 340 aaPredicted RBP19.06■□□□□ 0.64
RTN3-214ENST00000545432 ZBTB48P10074 688 aaPredicted RBP19.06■□□□□ 0.64
RTN3-214ENST00000545432 OTOP1Q7RTM1 612 aa19.06■□□□□ 0.64
RTN3-214ENST00000545432 IFNL1Q8IU54 200 aa19.06■□□□□ 0.64
RTN3-214ENST00000545432 MTMR14Q8NCE2 650 aa19.06■□□□□ 0.64
RTN3-214ENST00000545432 CCDC85AQ96PX6 553 aaPredicted RBP19.06■□□□□ 0.64
RTN3-214ENST00000545432 KIAA0100Q14667 2235 aaKnown RBP19.05■□□□□ 0.64
RTN3-214ENST00000545432 IGKV5-2P06315 115 aa19.05■□□□□ 0.64
RTN3-214ENST00000545432 MKRN3Q13064 507 aaKnown RBP19.05■□□□□ 0.64
RTN3-214ENST00000545432 MKI67P46013 3256 aaKnown RBP19.05■□□□□ 0.64
RTN3-214ENST00000545432 COL1A1P02452 1464 aaPredicted RBP19.04■□□□□ 0.64
RTN3-214ENST00000545432 POTEFA5A3E0 1075 aa19.04■□□□□ 0.64
RTN3-214ENST00000545432 TTLL5Q6EMB2 1281 aa19.04■□□□□ 0.64
RTN3-214ENST00000545432 GREM2Q9H772 168 aa19.04■□□□□ 0.64
RTN3-214ENST00000545432 IFT57Q9NWB7 429 aa19.04■□□□□ 0.64
RTN3-214ENST00000545432 HTTP42858 3142 aa19.04■□□□□ 0.64
RTN3-214ENST00000545432 IGF2BP3O00425 579 aaKnown RBP eCLIP19.03■□□□□ 0.64
RTN3-214ENST00000545432 SASH1O94885 1247 aa19.03■□□□□ 0.64
RTN3-214ENST00000545432 ARMC5Q96C12 935 aa19.03■□□□□ 0.64
RTN3-214ENST00000545432 ANGEL1Q9UNK9 670 aaKnown RBP19.03■□□□□ 0.64
RTN3-214ENST00000545432 ADAMTS8Q9UP79 889 aa19.03■□□□□ 0.64
RTN3-214ENST00000545432 TRIM17Q9Y577 477 aa19.03■□□□□ 0.64
RTN3-214ENST00000545432 PPP2R3BQ9Y5P8 575 aa19.03■□□□□ 0.64
RTN3-214ENST00000545432 TESPA1A2RU30 521 aaPredicted RBP19.02■□□□□ 0.64
RTN3-214ENST00000545432 DDX58O95786 925 aaKnown RBP19.02■□□□□ 0.64
RTN3-214ENST00000545432 KSR2Q6VAB6 950 aa19.02■□□□□ 0.64
RTN3-214ENST00000545432 SLC10A4Q96EP9 437 aa19.02■□□□□ 0.64
RTN3-214ENST00000545432 PLA2G12BQ9BX93 195 aa19.02■□□□□ 0.64
RTN3-214ENST00000545432 CHMP4AQ9BY43 222 aa19.02■□□□□ 0.64
RTN3-214ENST00000545432 DEFB129Q9H1M3 183 aa19.02■□□□□ 0.64
RTN3-214ENST00000545432 PTPN22Q9Y2R2 807 aa19.02■□□□□ 0.64
RTN3-214ENST00000545432 MYBBP1AQ9BQG0 1328 aaKnown RBP19.01■□□□□ 0.63
RTN3-214ENST00000545432 IRS2Q9Y4H2 1338 aa19.01■□□□□ 0.63
RTN3-214ENST00000545432 H7C1W4 665 aa19.01■□□□□ 0.63
RTN3-214ENST00000545432 WNK4Q96J92 1243 aa19.01■□□□□ 0.63
RTN3-214ENST00000545432 ZNF804BA4D1E1 1349 aa19■□□□□ 0.63
RTN3-214ENST00000545432 GNAI1P63096 354 aa19■□□□□ 0.63
RTN3-214ENST00000545432 PRKG1Q13976 671 aa19■□□□□ 0.63
RTN3-214ENST00000545432 C15orf52Q6ZUT6 534 aaKnown RBP19■□□□□ 0.63
RTN3-214ENST00000545432 KIAA0825Q8IV33 1275 aa19■□□□□ 0.63
RTN3-214ENST00000545432 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
RTN3-214ENST00000545432 ERO1AQ96HE7 468 aa19■□□□□ 0.63
RTN3-214ENST00000545432 MAP3K2Q9Y2U5 619 aa19■□□□□ 0.63
RTN3-214ENST00000545432 SSC5DA1L4H1 1573 aa19■□□□□ 0.63
RTN3-214ENST00000545432 LAMB1P07942 1786 aa19■□□□□ 0.63
RTN3-214ENST00000545432 ELL2O00472 640 aaPredicted RBP18.99■□□□□ 0.63
RTN3-214ENST00000545432 CSF1RP07333 972 aa18.99■□□□□ 0.63
RTN3-214ENST00000545432 CCDC30Q5VVM6 783 aa18.99■□□□□ 0.63
RTN3-214ENST00000545432 ANKRD2Q9GZV1 360 aa18.99■□□□□ 0.63
RTN3-214ENST00000545432 PI4KAP2A4QPH2 592 aa18.98■□□□□ 0.63
RTN3-214ENST00000545432 PPP1R12BO60237 982 aaPredicted RBP18.98■□□□□ 0.63
RTN3-214ENST00000545432 KLRK1P26718 216 aa18.98■□□□□ 0.63
RTN3-214ENST00000545432 FXR1P51114 621 aaKnown RBP eCLIP18.98■□□□□ 0.63
RTN3-214ENST00000545432 GTF2IP78347 998 aa18.98■□□□□ 0.63
RTN3-214ENST00000545432 CERS5Q8N5B7 392 aa18.98■□□□□ 0.63
RTN3-214ENST00000545432 PI4KAP1Q8N8J0 262 aa18.98■□□□□ 0.63
RTN3-214ENST00000545432 CLMNQ96JQ2 1002 aa18.98■□□□□ 0.63
RTN3-214ENST00000545432 CD209Q9NNX6 404 aa18.98■□□□□ 0.63
RTN3-214ENST00000545432 FZD1Q9UP38 647 aa18.98■□□□□ 0.63
RTN3-214ENST00000545432 RBBP6Q7Z6E9 1792 aaKnown RBP18.97■□□□□ 0.63
RTN3-214ENST00000545432 GJA5P36382 358 aa18.97■□□□□ 0.63
RTN3-214ENST00000545432 FKBP1AP62942 108 aaKnown RBP18.97■□□□□ 0.63
RTN3-214ENST00000545432 CAP1Q01518 475 aa18.97■□□□□ 0.63
RTN3-214ENST00000545432 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
RTN3-214ENST00000545432 PTPN18Q99952 460 aa18.97■□□□□ 0.63
RTN3-214ENST00000545432 NEURL1BA8MQ27 555 aa18.96■□□□□ 0.63
RTN3-214ENST00000545432 USP2O75604 605 aaPredicted RBP18.96■□□□□ 0.63
RTN3-214ENST00000545432 IGHMBP2P38935 993 aaKnown RBP18.96■□□□□ 0.63
RTN3-214ENST00000545432 CASP7P55210 303 aa18.96■□□□□ 0.63
RTN3-214ENST00000545432 WDR43Q15061 677 aaKnown RBP eCLIP18.96■□□□□ 0.63
RTN3-214ENST00000545432 DLGAP5Q15398 846 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms