RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 SNRKQ9NRH2 765 aa36.85■■■■□ 3.49
CCM2-219ENST00000544363 KCNJ4P48050 445 aa36.85■■■■□ 3.49
CCM2-219ENST00000544363 WTIPA6NIX2 430 aaPredicted RBP36.83■■■■□ 3.49
CCM2-219ENST00000544363 ZAP70P43403 619 aa36.83■■■■□ 3.49
CCM2-219ENST00000544363 BCAMP50895 628 aa36.83■■■■□ 3.49
CCM2-219ENST00000544363 TMC4Q7Z404 712 aa36.83■■■■□ 3.49
CCM2-219ENST00000544363 IL25Q9H293 177 aa36.83■■■■□ 3.49
CCM2-219ENST00000544363 AKAP11Q9UKA4 1901 aa36.83■■■■□ 3.49
CCM2-219ENST00000544363 ANTXR1Q9H6X2 564 aa36.82■■■■□ 3.49
CCM2-219ENST00000544363 ZNF804BA4D1E1 1349 aa36.81■■■■□ 3.48
CCM2-219ENST00000544363 XDHP47989 1333 aa36.81■■■■□ 3.48
CCM2-219ENST00000544363 NMIQ13287 307 aaPredicted RBP36.81■■■■□ 3.48
CCM2-219ENST00000544363 PI16Q6UXB8 463 aa36.81■■■■□ 3.48
CCM2-219ENST00000544363 MASTLQ96GX5 879 aa36.81■■■■□ 3.48
CCM2-219ENST00000544363 ANKIB1Q9P2G1 1089 aa36.81■■■■□ 3.48
CCM2-219ENST00000544363 LEMD3Q9Y2U8 911 aa36.81■■■■□ 3.48
CCM2-219ENST00000544363 ALDH1B1P30837 517 aa36.8■■■■□ 3.48
CCM2-219ENST00000544363 COL11A2P13942 1736 aaPredicted RBP36.8■■■■□ 3.48
CCM2-219ENST00000544363 CAVIN4Q5BKX8 364 aa36.79■■■■□ 3.48
CCM2-219ENST00000544363 FAM227BQ96M60 508 aa36.79■■■■□ 3.48
CCM2-219ENST00000544363 ANO2Q9NQ90 1003 aa36.78■■■■□ 3.48
CCM2-219ENST00000544363 HMG20BQ9P0W2 317 aa36.78■■■■□ 3.48
CCM2-219ENST00000544363 RAD50Q92878 1312 aa36.78■■■■□ 3.48
CCM2-219ENST00000544363 GYG1P46976 350 aa36.77■■■■□ 3.48
CCM2-219ENST00000544363 SLC51AQ86UW1 340 aa36.77■■■■□ 3.48
CCM2-219ENST00000544363 C2CD5Q86YS7 1000 aa36.77■■■■□ 3.48
CCM2-219ENST00000544363 FAM84BQ96KN1 310 aaPredicted RBP36.77■■■■□ 3.48
CCM2-219ENST00000544363 PPEF1O14829 653 aaPredicted RBP36.77■■■■□ 3.48
CCM2-219ENST00000544363 EPB41L2O43491 1005 aaKnown RBP36.77■■■■□ 3.48
CCM2-219ENST00000544363 RASGRF1Q13972 1273 aa36.77■■■■□ 3.48
CCM2-219ENST00000544363 SPATA5Q8NB90 893 aa36.77■■■■□ 3.48
CCM2-219ENST00000544363 GNL3LQ9NVN8 582 aaKnown RBP36.77■■■■□ 3.48
CCM2-219ENST00000544363 H0YIN7 160 aa36.76■■■■□ 3.48
CCM2-219ENST00000544363 TTF1Q15361 905 aaPredicted RBP36.76■■■■□ 3.48
CCM2-219ENST00000544363 SP8Q8IXZ3 490 aa36.76■■■■□ 3.48
CCM2-219ENST00000544363 A0A0D9SFI3 127 aa36.75■■■■□ 3.47
CCM2-219ENST00000544363 CYP2E1P05181 493 aaPredicted RBP36.75■■■■□ 3.47
CCM2-219ENST00000544363 GPSM2P81274 684 aa36.75■■■■□ 3.47
CCM2-219ENST00000544363 FBXO33Q7Z6M2 555 aa36.75■■■■□ 3.47
CCM2-219ENST00000544363 LRRFIP1Q32MZ4 808 aaKnown RBP36.74■■■■□ 3.47
CCM2-219ENST00000544363 KLRK1P26718 216 aa36.74■■■■□ 3.47
CCM2-219ENST00000544363 STYK1Q6J9G0 422 aa36.74■■■■□ 3.47
CCM2-219ENST00000544363 KIAA1211Q6ZU35 1233 aa36.74■■■■□ 3.47
CCM2-219ENST00000544363 VPS37DQ86XT2 251 aa36.74■■■■□ 3.47
CCM2-219ENST00000544363 ATP6V0A2Q9Y487 856 aa36.74■■■■□ 3.47
CCM2-219ENST00000544363 LRRC37AA6NMS7 1700 aa36.73■■■■□ 3.47
CCM2-219ENST00000544363 IRS2Q9Y4H2 1338 aa36.73■■■■□ 3.47
CCM2-219ENST00000544363 PODXL2Q9NZ53 605 aa36.73■■■■□ 3.47
CCM2-219ENST00000544363 NSFL1CQ9UNZ2 370 aaKnown RBP36.73■■■■□ 3.47
CCM2-219ENST00000544363 RNF113AO15541 343 aaKnown RBP36.72■■■■□ 3.47
CCM2-219ENST00000544363 ATP2B4P23634 1241 aa36.72■■■■□ 3.47
CCM2-219ENST00000544363 ZNF622Q969S3 477 aaKnown RBP eCLIP36.72■■■■□ 3.47
CCM2-219ENST00000544363 LSG1Q9H089 658 aaKnown RBP36.71■■■■□ 3.47
CCM2-219ENST00000544363 HIBADHP31937 336 aaKnown RBP36.7■■■■□ 3.47
CCM2-219ENST00000544363 DDRGK1Q96HY6 314 aa36.7■■■■□ 3.47
CCM2-219ENST00000544363 C10orf71Q711Q0 1435 aa36.7■■■■□ 3.47
CCM2-219ENST00000544363 MED23Q9ULK4 1368 aa36.7■■■■□ 3.47
CCM2-219ENST00000544363 CHGBP05060 677 aa36.7■■■■□ 3.47
CCM2-219ENST00000544363 ZFYP08048 801 aaPredicted RBP36.7■■■■□ 3.47
CCM2-219ENST00000544363 C15orf52Q6ZUT6 534 aaKnown RBP36.7■■■■□ 3.47
CCM2-219ENST00000544363 PIH1D3Q9NQM4 214 aaKnown RBP36.7■■■■□ 3.47
CCM2-219ENST00000544363 GGA1Q9UJY5 639 aa36.7■■■■□ 3.47
CCM2-219ENST00000544363 ZMYM1Q5SVZ6 1142 aa36.69■■■■□ 3.46
CCM2-219ENST00000544363 HELLSQ9NRZ9 838 aa36.69■■■■□ 3.46
CCM2-219ENST00000544363 ZBTB7AO95365 584 aa36.68■■■■□ 3.46
CCM2-219ENST00000544363 R3HDM1Q15032 1099 aaKnown RBP36.68■■■■□ 3.46
CCM2-219ENST00000544363 MCMDC2Q4G0Z9 681 aa36.68■■■■□ 3.46
CCM2-219ENST00000544363 IPO9Q96P70 1041 aaKnown RBP36.68■■■■□ 3.46
CCM2-219ENST00000544363 DDX24Q9GZR7 859 aaKnown RBP eCLIP36.68■■■■□ 3.46
CCM2-219ENST00000544363 SEMA3EO15041 775 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 UFL1O94874 794 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 TXNRD3Q86VQ6 643 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 KIF2CQ99661 725 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 MTFR1LQ9H019 292 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 DENND2AQ9ULE3 1009 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 IQSEC3Q9UPP2 1182 aaPredicted RBP36.67■■■■□ 3.46
CCM2-219ENST00000544363 ZBTB22O15209 634 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 MCCP23508 829 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 CHRNA5P30532 468 aa36.67■■■■□ 3.46
CCM2-219ENST00000544363 ZSCAN25Q6NSZ9 544 aa36.66■■■■□ 3.46
CCM2-219ENST00000544363 ZNF589Q86UQ0 364 aaPredicted RBP36.65■■■■□ 3.46
CCM2-219ENST00000544363 CNKSR1Q969H4 720 aa36.65■■■■□ 3.46
CCM2-219ENST00000544363 SLFNL1Q499Z3 407 aa36.64■■■■□ 3.46
CCM2-219ENST00000544363 TBC1D16Q8TBP0 767 aa36.64■■■■□ 3.46
CCM2-219ENST00000544363 SEC62Q99442 399 aaKnown RBP36.64■■■■□ 3.46
CCM2-219ENST00000544363 MYH7P12883 1935 aa36.64■■■■□ 3.46
CCM2-219ENST00000544363 LTBP1Q14766 1721 aa36.63■■■■□ 3.46
CCM2-219ENST00000544363 TMX4Q9H1E5 349 aaPredicted RBP36.63■■■■□ 3.45
CCM2-219ENST00000544363 CCDC171Q6TFL3 1326 aa36.63■■■■□ 3.45
CCM2-219ENST00000544363 IDH1O75874 414 aaKnown RBP36.63■■■■□ 3.45
CCM2-219ENST00000544363 PTH1RQ03431 593 aa36.63■■■■□ 3.45
CCM2-219ENST00000544363 POLLQ9UGP5 575 aa36.63■■■■□ 3.45
CCM2-219ENST00000544363 ATF5Q9Y2D1 282 aaPredicted RBP36.62■■■■□ 3.45
CCM2-219ENST00000544363 PDS5AQ29RF7 1337 aaKnown RBP36.62■■■■□ 3.45
CCM2-219ENST00000544363 COL1A1P02452 1464 aaPredicted RBP36.62■■■■□ 3.45
CCM2-219ENST00000544363 ADD2P35612 726 aa36.61■■■■□ 3.45
CCM2-219ENST00000544363 PRPF40BQ6NWY9 871 aaKnown RBP36.61■■■■□ 3.45
CCM2-219ENST00000544363 ZNF804AQ7Z570 1209 aa36.61■■■■□ 3.45
CCM2-219ENST00000544363 MYO5AQ9Y4I1 1855 aaKnown RBP36.61■■■■□ 3.45
CCM2-219ENST00000544363 DOCK2Q92608 1830 aa36.61■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms