RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 LARP6Q9BRS8 491 aaKnown RBP6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 C1orf115Q9H7X2 142 aa6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 TSR3Q9UJK0 312 aaKnown RBP6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 USP16Q9Y5T5 823 aa6.56□□□□□ -1.36
NPIPB4-219ENST00000543660 SHTN1A0MZ66 631 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 PPIP5K2O43314 1243 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 KCNQ3O43525 872 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 RAD21O60216 631 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 GFRA3O60609 400 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 SLC10A3P09131 477 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 HMOX1P09601 288 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 HSP90B1P14625 803 aaKnown RBP6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 ZNF157P51786 506 aaPredicted RBP6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 MFSD10Q14728 455 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 HLFQ16534 295 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 AOC3Q16853 763 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 FMNL2Q96PY5 1086 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 VPS33BQ9H267 617 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 GBA2Q9HCG7 927 aaPredicted RBP6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 ZNRF3Q9ULT6 936 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 ZNF652Q9Y2D9 606 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 ABCC12Q96J65 1359 aa6.55□□□□□ -1.36
NPIPB4-219ENST00000543660 KIAA0100Q14667 2235 aaKnown RBP6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 KIF7Q2M1P5 1343 aa6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 CDHR2Q9BYE9 1310 aa6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 PRAMEF22A3QJZ6 481 aa6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 NBPF26B4DH59 902 aa6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 TEFQ10587 303 aa6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 NBPF10Q6P3W6 841 aaKnown RBP6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 NUTM1Q86Y26 1132 aa6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 ZNF296Q8WUU4 475 aaPredicted RBP6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 CNOT7Q9UIV1 285 aaKnown RBP6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 COL6A3P12111 3177 aa6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 AKAP11Q9UKA4 1901 aa6.54□□□□□ -1.36
NPIPB4-219ENST00000543660 RIC1Q4ADV7 1423 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 TESPA1A2RU30 521 aaPredicted RBP6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 LCE2BO14633 110 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 TCERG1O14776 1098 aaKnown RBP6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 PPEF1O14829 653 aaPredicted RBP6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 RAD17O75943 681 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 GTF2E1P29083 439 aaPredicted RBP6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 TMCO4Q5TGY1 634 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 KRT26Q7Z3Y9 468 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 MORC1Q86VD1 984 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 C2orf69Q8N8R5 385 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 IL27Q8NEV9 243 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 LRCH3Q96II8 777 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 CRAMP1Q96RY5 1269 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 EPAS1Q99814 870 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 BCL2L13Q9BXK5 485 aa6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 RTFDC1Q9BY42 306 aaPredicted RBP6.53□□□□□ -1.36
NPIPB4-219ENST00000543660 TRIM6-TRIM34B2RNG4 842 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 ADM5C9JUS6 153 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 H7C1D1 291 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 DLL1O00548 723 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 NRG2O14511 850 aaPredicted RBP6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 EIF5BO60841 1220 aaKnown RBP6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 TBC1D8O95759 1140 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 EGFRP00533 1210 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 TNIP1Q15025 636 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 C6orf132Q5T0Z8 1188 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 FBXO46Q6PJ61 603 aaPredicted RBP6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 SAMD7Q7Z3H4 446 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 NECTIN2Q92692 538 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 RPGRQ92834 1020 aaKnown RBP6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 RBM17Q96I25 401 aaKnown RBP6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 TRAIPQ9BWF2 469 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 NYXQ9GZU5 481 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 KDM4CQ9H3R0 1056 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 PANK3Q9H999 370 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 EMILIN3Q9NT22 766 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 SEPT9Q9UHD8 586 aaPredicted RBP6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 HDAC9Q9UKV0 1011 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 ATP6V0A2Q9Y487 856 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 CEMIPQ8WUJ3 1361 aa6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 SIPA1L3O60292 1781 aaPredicted RBP6.52□□□□□ -1.37
NPIPB4-219ENST00000543660 POLR2AP24928 1970 aaKnown RBP6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 BTBD11A6QL63 1104 aa6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 YDJCA8MPS7 323 aa6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 GNAT3A8MTJ3 354 aa6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 SNRPA1P09661 255 aaKnown RBP6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 KIAA2012Q0VF49 1180 aa6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 NOM1Q5C9Z4 860 aaKnown RBP6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 RASAL3Q86YV0 1011 aa6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 CCDC82Q8N4S0 544 aa6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 DPF2Q92785 391 aa6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 LAMA3Q16787 3333 aa6.51□□□□□ -1.37
NPIPB4-219ENST00000543660 GPR25O00155 361 aa6.5□□□□□ -1.37
NPIPB4-219ENST00000543660 E2F4Q16254 413 aa6.5□□□□□ -1.37
NPIPB4-219ENST00000543660 TBC1D10BQ4KMP7 808 aaPredicted RBP6.5□□□□□ -1.37
NPIPB4-219ENST00000543660 SUSD4Q5VX71 490 aa6.5□□□□□ -1.37
NPIPB4-219ENST00000543660 SUPT20HQ8NEM7 779 aa6.5□□□□□ -1.37
NPIPB4-219ENST00000543660 POLR3GLQ9BT43 218 aa6.5□□□□□ -1.37
NPIPB4-219ENST00000543660 V9GY48 417 aaPredicted RBP6.5□□□□□ -1.37
NPIPB4-219ENST00000543660 UBN2Q6ZU65 1347 aa6.5□□□□□ -1.37
NPIPB4-219ENST00000543660 ERVV-1B6SEH8 477 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 TM4SF4P48230 202 aa6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 DPP8Q6V1X1 898 aaPredicted RBP6.49□□□□□ -1.37
NPIPB4-219ENST00000543660 SP8Q8IXZ3 490 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms