RNA–Protein interactions for RNA: ENST00000543511.1

DDX11-225, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-225ENST00000543511 RBM17Q96I25 401 aaKnown RBP13.26□□□□□ -0.29
DDX11-225ENST00000543511 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
DDX11-225ENST00000543511 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 UBTFL1P0CB47 393 aaPredicted RBP13.25□□□□□ -0.29
DDX11-225ENST00000543511 GRAPQ13588 217 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 CCDC152Q4G0S7 254 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 DALRD3Q5D0E6 543 aaKnown RBP13.25□□□□□ -0.29
DDX11-225ENST00000543511 IL27Q8NEV9 243 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 GRAPLQ8TC17 118 aaPredicted RBP13.25□□□□□ -0.29
DDX11-225ENST00000543511 C7orf43Q8WVR3 580 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 CELF1Q92879 486 aaKnown RBP13.25□□□□□ -0.29
DDX11-225ENST00000543511 CCDC85AQ96PX6 553 aaPredicted RBP13.25□□□□□ -0.29
DDX11-225ENST00000543511 GREM2Q9H772 168 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 SEC31BQ9NQW1 1179 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
DDX11-225ENST00000543511 BCS1LQ9Y276 419 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
DDX11-225ENST00000543511 ZBTB7BO15156 539 aaPredicted RBP13.24□□□□□ -0.29
DDX11-225ENST00000543511 TBC1D12O60347 775 aa13.24□□□□□ -0.29
DDX11-225ENST00000543511 GNAI3P08754 354 aa13.24□□□□□ -0.29
DDX11-225ENST00000543511 ALDH1B1P30837 517 aa13.24□□□□□ -0.29
DDX11-225ENST00000543511 LMBR1LQ6UX01 489 aa13.24□□□□□ -0.29
DDX11-225ENST00000543511 DDX46Q7L014 1031 aaKnown RBP13.24□□□□□ -0.29
DDX11-225ENST00000543511 LRRFIP2Q9Y608 721 aaKnown RBP13.24□□□□□ -0.29
DDX11-225ENST00000543511 DUOX1Q9NRD9 1551 aa13.24□□□□□ -0.29
DDX11-225ENST00000543511 CHD4Q14839 1912 aa13.23□□□□□ -0.29
DDX11-225ENST00000543511 DDX12PQ92771 950 aa13.23□□□□□ -0.29
DDX11-225ENST00000543511 DICER1Q9UPY3 1922 aaKnown RBP13.23□□□□□ -0.29
DDX11-225ENST00000543511 PPEF1O14829 653 aaPredicted RBP13.22□□□□□ -0.29
DDX11-225ENST00000543511 ITGA6P23229 1130 aa13.22□□□□□ -0.29
DDX11-225ENST00000543511 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
DDX11-225ENST00000543511 DCBLD2Q96PD2 775 aa13.22□□□□□ -0.29
DDX11-225ENST00000543511 DDX19BQ9UMR2 479 aa13.22□□□□□ -0.29
DDX11-225ENST00000543511 SUPT16HQ9Y5B9 1047 aaKnown RBP13.22□□□□□ -0.29
DDX11-225ENST00000543511 POTEFA5A3E0 1075 aa13.21□□□□□ -0.29
DDX11-225ENST00000543511 EVI5O60447 810 aa13.21□□□□□ -0.29
DDX11-225ENST00000543511 BBOX1O75936 387 aa13.21□□□□□ -0.29
DDX11-225ENST00000543511 RPS8P62241 208 aaKnown RBP13.21□□□□□ -0.29
DDX11-225ENST00000543511 MAP2K5Q13163 448 aa13.21□□□□□ -0.29
DDX11-225ENST00000543511 MTX1Q13505 466 aa13.21□□□□□ -0.29
DDX11-225ENST00000543511 GPR162Q16538 588 aa13.21□□□□□ -0.29
DDX11-225ENST00000543511 CDC5LQ99459 802 aaKnown RBP13.21□□□□□ -0.29
DDX11-225ENST00000543511 ANKRD18BA2A2Z9 1011 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 C21orf2O43822 256 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 GNAI2P04899 355 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 RFX5P48382 616 aaPredicted RBP13.2□□□□□ -0.3
DDX11-225ENST00000543511 ANKRD18AQ8IVF6 992 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 SLC39A7Q92504 469 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 C1orf115Q9H7X2 142 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 ZBTB40Q9NUA8 1239 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 CHMP3Q9Y3E7 222 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 ATP6V0A2Q9Y487 856 aa13.2□□□□□ -0.3
DDX11-225ENST00000543511 IRF6O14896 467 aa13.19□□□□□ -0.3
DDX11-225ENST00000543511 IFIT5Q13325 482 aaKnown RBP13.19□□□□□ -0.3
DDX11-225ENST00000543511 CCDC93Q567U6 631 aa13.19□□□□□ -0.3
DDX11-225ENST00000543511 TMC4Q7Z404 712 aa13.19□□□□□ -0.3
DDX11-225ENST00000543511 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
DDX11-225ENST00000543511 CCDC102AQ96A19 550 aa13.19□□□□□ -0.3
DDX11-225ENST00000543511 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
DDX11-225ENST00000543511 TIAM2Q8IVF5 1701 aa13.19□□□□□ -0.3
DDX11-225ENST00000543511 NFKBIEO00221 500 aa13.18□□□□□ -0.3
DDX11-225ENST00000543511 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
DDX11-225ENST00000543511 SOGA3Q5TF21 947 aa13.18□□□□□ -0.3
DDX11-225ENST00000543511 ZNF594Q96JF6 807 aaPredicted RBP13.18□□□□□ -0.3
DDX11-225ENST00000543511 BSDC1Q9NW68 430 aaPredicted RBP13.18□□□□□ -0.3
DDX11-225ENST00000543511 LTBP3Q9NS15 1303 aa13.17□□□□□ -0.3
DDX11-225ENST00000543511 PNMA6EA0A0J9YXQ4 647 aa13.17□□□□□ -0.3
DDX11-225ENST00000543511 GRIN3BO60391 1043 aa13.17□□□□□ -0.3
DDX11-225ENST00000543511 IGHMBP2P38935 993 aaKnown RBP13.17□□□□□ -0.3
DDX11-225ENST00000543511 RASSF7Q02833 373 aa13.17□□□□□ -0.3
DDX11-225ENST00000543511 HIC1Q14526 733 aa13.17□□□□□ -0.3
DDX11-225ENST00000543511 CC2D2BQ6DHV5 1058 aa13.17□□□□□ -0.3
DDX11-225ENST00000543511 CEP85Q6P2H3 762 aa13.17□□□□□ -0.3
DDX11-225ENST00000543511 COL4A5P29400 1685 aa13.16□□□□□ -0.3
DDX11-225ENST00000543511 C7P10643 843 aa13.16□□□□□ -0.3
DDX11-225ENST00000543511 FECHP22830 423 aa13.16□□□□□ -0.3
DDX11-225ENST00000543511 PRELPP51888 382 aa13.16□□□□□ -0.3
DDX11-225ENST00000543511 ATP8B2P98198 1209 aa13.16□□□□□ -0.3
DDX11-225ENST00000543511 PTPN12Q05209 780 aaKnown RBP13.16□□□□□ -0.3
DDX11-225ENST00000543511 KLHDC4Q8TBB5 520 aa13.16□□□□□ -0.3
DDX11-225ENST00000543511 PTCD2Q8WV60 388 aaKnown RBP13.16□□□□□ -0.3
DDX11-225ENST00000543511 PUS3Q9BZE2 481 aaKnown RBP13.16□□□□□ -0.3
DDX11-225ENST00000543511 MINPP1Q9UNW1 487 aa13.16□□□□□ -0.3
DDX11-225ENST00000543511 SRGAP3O43295 1099 aa13.15□□□□□ -0.3
DDX11-225ENST00000543511 GPSM2P81274 684 aa13.15□□□□□ -0.3
DDX11-225ENST00000543511 FKBP4Q02790 459 aaKnown RBP eCLIP13.15□□□□□ -0.3
DDX11-225ENST00000543511 ARHGAP27Q6ZUM4 889 aa13.15□□□□□ -0.3
DDX11-225ENST00000543511 RTKN2Q8IZC4 609 aa13.15□□□□□ -0.3
DDX11-225ENST00000543511 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
DDX11-225ENST00000543511 PSMD1Q99460 953 aa13.15□□□□□ -0.3
DDX11-225ENST00000543511 RTFDC1Q9BY42 306 aaPredicted RBP13.15□□□□□ -0.3
DDX11-225ENST00000543511 CHMP4BQ9H444 224 aaKnown RBP13.15□□□□□ -0.3
DDX11-225ENST00000543511 PODXL2Q9NZ53 605 aa13.15□□□□□ -0.3
DDX11-225ENST00000543511 PA2G4Q9UQ80 394 aaKnown RBP13.15□□□□□ -0.3
DDX11-225ENST00000543511 ARAP2Q8WZ64 1704 aa13.15□□□□□ -0.3
DDX11-225ENST00000543511 CHRNDQ07001 517 aa13.14□□□□□ -0.31
DDX11-225ENST00000543511 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
DDX11-225ENST00000543511 LRRC24Q50LG9 513 aa13.14□□□□□ -0.31
DDX11-225ENST00000543511 TAF7LQ5H9L4 462 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms