RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 EXOC6BQ9Y2D4 811 aa15.02■□□□□ -0
DDX55-210ENST00000543016 LTBP1Q14766 1721 aa15.01□□□□□ -0.01
DDX55-210ENST00000543016 CAVIN4Q5BKX8 364 aa15.01□□□□□ -0.01
DDX55-210ENST00000543016 RHPN1Q8TCX5 695 aa15.01□□□□□ -0.01
DDX55-210ENST00000543016 COA1Q9GZY4 146 aa15.01□□□□□ -0.01
DDX55-210ENST00000543016 DUOX1Q9NRD9 1551 aa15□□□□□ -0.01
DDX55-210ENST00000543016 G3V3G9 751 aa15□□□□□ -0.01
DDX55-210ENST00000543016 RASSF7Q02833 373 aa15□□□□□ -0.01
DDX55-210ENST00000543016 DCAF8Q5TAQ9 597 aa15□□□□□ -0.01
DDX55-210ENST00000543016 ZNF804AQ7Z570 1209 aa15□□□□□ -0.01
DDX55-210ENST00000543016 PODNQ7Z5L7 613 aa15□□□□□ -0.01
DDX55-210ENST00000543016 NIM1KQ8IY84 436 aa15□□□□□ -0.01
DDX55-210ENST00000543016 CLASRPQ8N2M8 674 aaKnown RBP15□□□□□ -0.01
DDX55-210ENST00000543016 LRRCC1Q9C099 1032 aa15□□□□□ -0.01
DDX55-210ENST00000543016 ZBTB47Q9UFB7 747 aaPredicted RBP15□□□□□ -0.01
DDX55-210ENST00000543016 SPEF2Q9C093 1822 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 AOC3Q16853 763 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 TNNI3KQ59H18 835 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 C9orf131Q5VYM1 1079 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 SLC51AQ86UW1 340 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 SMC5Q8IY18 1101 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 GNL3LQ9NVN8 582 aaKnown RBP14.99□□□□□ -0.01
DDX55-210ENST00000543016 RNF181Q9P0P0 153 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 ZNRF3Q9ULT6 936 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 FPGT-TNNI3KV9GXZ4 949 aa14.99□□□□□ -0.01
DDX55-210ENST00000543016 IRS2Q9Y4H2 1338 aa14.98□□□□□ -0.01
DDX55-210ENST00000543016 A0A1B0GUL7 405 aa14.98□□□□□ -0.01
DDX55-210ENST00000543016 HIBADHP31937 336 aaKnown RBP14.98□□□□□ -0.01
DDX55-210ENST00000543016 FBXO33Q7Z6M2 555 aa14.98□□□□□ -0.01
DDX55-210ENST00000543016 VPS37DQ86XT2 251 aa14.98□□□□□ -0.01
DDX55-210ENST00000543016 FZD9O00144 591 aa14.97□□□□□ -0.01
DDX55-210ENST00000543016 RIMBP2O15034 1052 aa14.97□□□□□ -0.01
DDX55-210ENST00000543016 FAM84BQ96KN1 310 aaPredicted RBP14.97□□□□□ -0.01
DDX55-210ENST00000543016 SEMA3EO15041 775 aa14.96□□□□□ -0.01
DDX55-210ENST00000543016 IL1R1P14778 569 aa14.96□□□□□ -0.01
DDX55-210ENST00000543016 PRELPP51888 382 aa14.96□□□□□ -0.01
DDX55-210ENST00000543016 EIF6P56537 245 aaKnown RBP14.96□□□□□ -0.01
DDX55-210ENST00000543016 TIMM10P62072 90 aa14.96□□□□□ -0.01
DDX55-210ENST00000543016 GORABQ5T7V8 394 aa14.96□□□□□ -0.01
DDX55-210ENST00000543016 XAGE2Q96GT9 111 aa14.96□□□□□ -0.01
DDX55-210ENST00000543016 NEUROD6Q96NK8 337 aa14.96□□□□□ -0.01
DDX55-210ENST00000543016 CD209Q9NNX6 404 aa14.96□□□□□ -0.01
DDX55-210ENST00000543016 ZNF609O15014 1411 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 WTIPA6NIX2 430 aaPredicted RBP14.95□□□□□ -0.02
DDX55-210ENST00000543016 SNAP23O00161 211 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 ECE2O60344 883 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 IGHDP01880 384 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 IFIT2P09913 472 aaKnown RBP14.95□□□□□ -0.02
DDX55-210ENST00000543016 UQCRFS1P1P0C7P4 283 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 TNIP1Q15025 636 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 CCDC158Q5M9N0 1113 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 DPY19L2Q6NUT2 758 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 AACSQ86V21 672 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 TXNRD3Q86VQ6 643 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 TDRD7Q8NHU6 1098 aaKnown RBP14.95□□□□□ -0.02
DDX55-210ENST00000543016 EAF2Q96CJ1 260 aaPredicted RBP14.95□□□□□ -0.02
DDX55-210ENST00000543016 ZNF512BQ96KM6 892 aaPredicted RBP14.95□□□□□ -0.02
DDX55-210ENST00000543016 A0A1B0GUL6 1792 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 SBF1O95248 1867 aa14.95□□□□□ -0.02
DDX55-210ENST00000543016 APBB1O00213 710 aa14.94□□□□□ -0.02
DDX55-210ENST00000543016 KLRK1P26718 216 aa14.94□□□□□ -0.02
DDX55-210ENST00000543016 GYG1P46976 350 aa14.94□□□□□ -0.02
DDX55-210ENST00000543016 DOK7Q18PE1 504 aa14.94□□□□□ -0.02
DDX55-210ENST00000543016 ANKRD45Q5TZF3 282 aa14.94□□□□□ -0.02
DDX55-210ENST00000543016 GPR101Q96P66 508 aaPredicted RBP14.94□□□□□ -0.02
DDX55-210ENST00000543016 DBNDD1Q9H9R9 158 aa14.94□□□□□ -0.02
DDX55-210ENST00000543016 IL1RAPL2Q9NP60 686 aa14.94□□□□□ -0.02
DDX55-210ENST00000543016 PPP4R2Q9NY27 417 aa14.94□□□□□ -0.02
DDX55-210ENST00000543016 MMP14P50281 582 aa14.93□□□□□ -0.02
DDX55-210ENST00000543016 BCAMP50895 628 aa14.93□□□□□ -0.02
DDX55-210ENST00000543016 FKBP1AP62942 108 aaKnown RBP14.93□□□□□ -0.02
DDX55-210ENST00000543016 STRIP1Q5VSL9 837 aa14.93□□□□□ -0.02
DDX55-210ENST00000543016 CCDC102BQ68D86 513 aa14.93□□□□□ -0.02
DDX55-210ENST00000543016 CENPQQ7L2Z9 268 aaPredicted RBP14.93□□□□□ -0.02
DDX55-210ENST00000543016 CCDC136Q96JN2 1154 aa14.93□□□□□ -0.02
DDX55-210ENST00000543016 DENND2AQ9ULE3 1009 aa14.93□□□□□ -0.02
DDX55-210ENST00000543016 DICER1Q9UPY3 1922 aaKnown RBP14.93□□□□□ -0.02
DDX55-210ENST00000543016 PDS5AQ29RF7 1337 aaKnown RBP14.92□□□□□ -0.02
DDX55-210ENST00000543016 USP17L3A6NCW0 530 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 USP17L4A6NCW7 530 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 IGSF3O75054 1194 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 FRAT2O75474 233 aaPredicted RBP14.92□□□□□ -0.02
DDX55-210ENST00000543016 NUCB1Q02818 461 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 CIAPIN1Q6FI81 312 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 USP17L1Q7RTZ2 530 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 GPC2Q8N158 579 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 TBC1D22AQ8WUA7 517 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 GPATCH3Q96I76 525 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 DBNDD2Q9BQY9 259 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 DBNLQ9UJU6 430 aaKnown RBP14.92□□□□□ -0.02
DDX55-210ENST00000543016 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.92□□□□□ -0.02
DDX55-210ENST00000543016 FAM205AQ6ZU69 1335 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 MYO3BQ8WXR4 1341 aa14.92□□□□□ -0.02
DDX55-210ENST00000543016 YDJCA8MPS7 323 aa14.91□□□□□ -0.02
DDX55-210ENST00000543016 VIL1P09327 827 aaKnown RBP14.91□□□□□ -0.02
DDX55-210ENST00000543016 RPS12P25398 132 aaKnown RBP14.91□□□□□ -0.02
DDX55-210ENST00000543016 ARID4AP29374 1257 aaPredicted RBP14.91□□□□□ -0.02
DDX55-210ENST00000543016 ADORA1P30542 326 aa14.91□□□□□ -0.02
DDX55-210ENST00000543016 CXCL9Q07325 125 aa14.91□□□□□ -0.02
DDX55-210ENST00000543016 CHD1LQ86WJ1 897 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms