RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
NPIPB3-210ENST00000542817 FBXO33Q7Z6M2 555 aa13.18□□□□□ -0.3
NPIPB3-210ENST00000542817 SKAP1Q86WV1 359 aa13.18□□□□□ -0.3
NPIPB3-210ENST00000542817 ERC1Q8IUD2 1116 aa13.18□□□□□ -0.3
NPIPB3-210ENST00000542817 LPIN2Q92539 896 aa13.18□□□□□ -0.3
NPIPB3-210ENST00000542817 DBNDD2Q9BQY9 259 aa13.18□□□□□ -0.3
NPIPB3-210ENST00000542817 LRRCC1Q9C099 1032 aa13.18□□□□□ -0.3
NPIPB3-210ENST00000542817 MED23Q9ULK4 1368 aa13.18□□□□□ -0.3
NPIPB3-210ENST00000542817 PDE4AP27815 886 aa13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 KIAA2012Q0VF49 1180 aa13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 OS9Q13438 667 aaPredicted RBP13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 ANKRD45Q5TZF3 282 aa13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 CCDC8Q9H0W5 538 aaPredicted RBP13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 ARAP2Q8WZ64 1704 aa13.17□□□□□ -0.3
NPIPB3-210ENST00000542817 C6orf229H3BNL8 230 aa13.16□□□□□ -0.3
NPIPB3-210ENST00000542817 GYG1P46976 350 aa13.16□□□□□ -0.3
NPIPB3-210ENST00000542817 GPR162Q16538 588 aa13.16□□□□□ -0.3
NPIPB3-210ENST00000542817 AOC3Q16853 763 aa13.16□□□□□ -0.3
NPIPB3-210ENST00000542817 CCDC136Q96JN2 1154 aa13.16□□□□□ -0.3
NPIPB3-210ENST00000542817 YDJCA8MPS7 323 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 RIMBP2O15034 1052 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 ZBTB22O15209 634 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 IARSP41252 1262 aaKnown RBP13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 PHKA1P46020 1223 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 BCAMP50895 628 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 WASHC4Q2M389 1173 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 CENPQQ7L2Z9 268 aaPredicted RBP13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 AACSQ86V21 672 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 CHD1LQ86WJ1 897 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 LNPKQ9C0E8 428 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 AKAP2Q9Y2D5 859 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 SBF1O95248 1867 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 COL1A1P02452 1464 aaPredicted RBP13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 CHD4Q14839 1912 aa13.15□□□□□ -0.3
NPIPB3-210ENST00000542817 IL1R1P14778 569 aa13.14□□□□□ -0.31
NPIPB3-210ENST00000542817 DOK7Q18PE1 504 aa13.14□□□□□ -0.31
NPIPB3-210ENST00000542817 VPS33BQ9H267 617 aa13.14□□□□□ -0.31
NPIPB3-210ENST00000542817 SCN9AQ15858 1988 aa13.14□□□□□ -0.31
NPIPB3-210ENST00000542817 ZNF646O15015 1829 aaPredicted RBP13.14□□□□□ -0.31
NPIPB3-210ENST00000542817 PPIP5K2O43314 1243 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 GRIN3BO60391 1043 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 IFIT1P09914 478 aaKnown RBP13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 SLC5A1P13866 664 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 KCNJ4P48050 445 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 SCARF1Q14162 830 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 CCDC102BQ68D86 513 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 CLASRPQ8N2M8 674 aaKnown RBP13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 SUPT20HQ8NEM7 779 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 TDRD7Q8NHU6 1098 aaKnown RBP13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 NEUROD6Q96NK8 337 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 ZC3H12CQ9C0D7 883 aaKnown RBP13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 TMX4Q9H1E5 349 aaPredicted RBP13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 DBNDD1Q9H9R9 158 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 CD209Q9NNX6 404 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 LMNB1P20700 586 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 ARID4AP29374 1257 aaPredicted RBP13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 HIBADHP31937 336 aaKnown RBP13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 TSHZ3Q63HK5 1081 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 EYA3Q99504 573 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 STAP2Q9UGK3 403 aa13.13□□□□□ -0.31
NPIPB3-210ENST00000542817 FZD9O00144 591 aa13.12□□□□□ -0.31
NPIPB3-210ENST00000542817 PLEKHM2Q8IWE5 1019 aa13.12□□□□□ -0.31
NPIPB3-210ENST00000542817 PI4K2BQ8TCG2 481 aa13.12□□□□□ -0.31
NPIPB3-210ENST00000542817 ZNF512BQ96KM6 892 aaPredicted RBP13.12□□□□□ -0.31
NPIPB3-210ENST00000542817 COA1Q9GZY4 146 aa13.12□□□□□ -0.31
NPIPB3-210ENST00000542817 AKAP11Q9UKA4 1901 aa13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 ECE2O60344 883 aa13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 MCAMP43121 646 aa13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 RASGRF1Q13972 1273 aa13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 C9orf131Q5VYM1 1079 aa13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 PI16Q6UXB8 463 aa13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 LARGE2Q8N3Y3 721 aa13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 IQSEC3Q9UPP2 1182 aaPredicted RBP13.11□□□□□ -0.31
NPIPB3-210ENST00000542817 DICER1Q9UPY3 1922 aaKnown RBP13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 IFIT2P09913 472 aaKnown RBP13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 PDE1AP54750 535 aa13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 PODNQ7Z5L7 613 aa13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 BCL11AQ9H165 835 aa13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 OSBPL3Q9H4L5 887 aa13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 HMG20BQ9P0W2 317 aa13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 ZNRF3Q9ULT6 936 aa13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 NDUFB9Q9Y6M9 179 aa13.1□□□□□ -0.31
NPIPB3-210ENST00000542817 FAM205AQ6ZU69 1335 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 ZNF541Q9H0D2 1346 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 ATP5JP18859 108 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 MX1P20591 662 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 CXCL9Q07325 125 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 GRIK5Q16478 980 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 CAVIN4Q5BKX8 364 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 DACT2Q5SW24 774 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 ZNF804AQ7Z570 1209 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 CERS5Q8N5B7 392 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 MXD3Q9BW11 206 aa13.09□□□□□ -0.31
NPIPB3-210ENST00000542817 ECHDC1Q9NTX5 307 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms