RNA–Protein interactions for RNA: ENST00000542411.5

CYB561A3-218, Transcript of cytochrome b561 family member A3, humanhuman

TSL 2

Gene CYB561A3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-218ENST00000542411 KIF3CO14782 793 aa14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 IFIT1P09914 478 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 RPS12P25398 132 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 C15orf52Q6ZUT6 534 aaKnown RBP14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 USP17L1Q7RTZ2 530 aa14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 PNMA8AQ86V59 439 aaPredicted RBP14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 FBXW7Q969H0 707 aa14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 SBF1O95248 1867 aa14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 MYH3P11055 1940 aa14.09□□□□□ -0.15
CYB561A3-218ENST00000542411 PSMD14O00487 310 aa14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 FRAT2O75474 233 aaPredicted RBP14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 HIBADHP31937 336 aaKnown RBP14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 EPHX2P34913 555 aa14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 GMPSP49915 693 aaPredicted RBP14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 ATP8B2P98198 1209 aa14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 OS9Q13438 667 aaPredicted RBP14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 PUM3Q15397 648 aaKnown RBP14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 DPF2Q92785 391 aa14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 CLEC11AQ9Y240 323 aa14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 TAF1P21675 1872 aa14.08□□□□□ -0.16
CYB561A3-218ENST00000542411 WTIPA6NIX2 430 aaPredicted RBP14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 YDJCA8MPS7 323 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 HMMRO75330 724 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 SLC5A1P13866 664 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 EAPPQ56P03 285 aaPredicted RBP14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 TTLL5Q6EMB2 1281 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 RBM46Q8TBY0 533 aaKnown RBP14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 LPIN2Q92539 896 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 TAF1DQ9H5J8 278 aaPredicted RBP14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 C1orf115Q9H7X2 142 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 CD209Q9NNX6 404 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 PA2G4Q9UQ80 394 aaKnown RBP14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 AKAP2Q9Y2D5 859 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 LRRC37AA6NMS7 1700 aa14.07□□□□□ -0.16
CYB561A3-218ENST00000542411 SNAP23O00161 211 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 VIL1P09327 827 aaKnown RBP14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 C1QTNF8P60827 252 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 C20orf194Q5TEA3 1177 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 STRIP1Q5VSL9 837 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 RSBN1LQ6PCB5 846 aaPredicted RBP14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 TXNRD3Q86VQ6 643 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 RPAP2Q8IXW5 612 aaPredicted RBP14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 SMC1BQ8NDV3 1235 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 AGBL3Q8NEM8 1001 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 KCNQ5Q9NR82 932 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 ADARB2Q9NS39 739 aaKnown RBP14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 GPRC5DQ9NZD1 345 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 CNOT7Q9UIV1 285 aaKnown RBP14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 COL4A1P02462 1669 aa14.06□□□□□ -0.16
CYB561A3-218ENST00000542411 PNMA6EA0A0J9YXQ4 647 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 POTECB2RU33 542 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 SURF6O75683 361 aaKnown RBP14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 GTF2IP78347 998 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 FSTL1Q12841 308 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 ATP2B3Q16720 1220 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 USP50Q70EL3 339 aaPredicted RBP14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 ATG9AQ7Z3C6 839 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 OGFOD1Q8N543 542 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 ZBTB40Q9NUA8 1239 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 GNL3LQ9NVN8 582 aaKnown RBP14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 MYO3BQ8WXR4 1341 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 DUOX1Q9NRD9 1551 aa14.05□□□□□ -0.16
CYB561A3-218ENST00000542411 KLRK1P26718 216 aa14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 EPS15P42566 896 aa14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 GYG1P46976 350 aa14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 MMP14P50281 582 aa14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 SCNN1DP51172 638 aa14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 HSP90AB4PQ58FF6 505 aa14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 LDHDQ86WU2 507 aa14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 FAM84BQ96KN1 310 aaPredicted RBP14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 ZBTB12Q9Y330 459 aaPredicted RBP14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 CCDC88AQ3V6T2 1871 aa14.04□□□□□ -0.16
CYB561A3-218ENST00000542411 DICER1Q9UPY3 1922 aaKnown RBP14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 SASH1O94885 1247 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 IL1R1P14778 569 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 POLA2Q14181 598 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 GORABQ5T7V8 394 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 CHADLQ6NUI6 762 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 CEP85Q6P2H3 762 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 MICALL2Q8IY33 904 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 VGLL2Q8N8G2 317 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 HDAC9Q9UKV0 1011 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 COL4A5P29400 1685 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 TIAM2Q8IVF5 1701 aa14.03□□□□□ -0.16
CYB561A3-218ENST00000542411 USP17L8P0C7I0 530 aa14.02□□□□□ -0.17
CYB561A3-218ENST00000542411 FGFR2P21802 821 aa14.02□□□□□ -0.17
CYB561A3-218ENST00000542411 TFCP2Q12800 502 aa14.02□□□□□ -0.17
CYB561A3-218ENST00000542411 FBXO33Q7Z6M2 555 aa14.02□□□□□ -0.17
CYB561A3-218ENST00000542411 ERC1Q8IUD2 1116 aa14.02□□□□□ -0.17
CYB561A3-218ENST00000542411 NEUROD6Q96NK8 337 aa14.02□□□□□ -0.17
CYB561A3-218ENST00000542411 BCAMP50895 628 aa14.01□□□□□ -0.17
CYB561A3-218ENST00000542411 DACT2Q5SW24 774 aa14.01□□□□□ -0.17
CYB561A3-218ENST00000542411 RBM26Q5T8P6 1007 aaKnown RBP14.01□□□□□ -0.17
CYB561A3-218ENST00000542411 TDRD7Q8NHU6 1098 aaKnown RBP14.01□□□□□ -0.17
CYB561A3-218ENST00000542411 IRS2Q9Y4H2 1338 aa14□□□□□ -0.17
CYB561A3-218ENST00000542411 ZC3H15Q8WU90 426 aaKnown RBP14□□□□□ -0.17
CYB561A3-218ENST00000542411 TBC1D22AQ8WUA7 517 aa14□□□□□ -0.17
CYB561A3-218ENST00000542411 NOP58Q9Y2X3 529 aaKnown RBP14□□□□□ -0.17
CYB561A3-218ENST00000542411 WDR90Q96KV7 1748 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms