RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
LDHA-220ENST00000542179 IFIT2P09913 472 aaKnown RBP11.32□□□□□ -0.6
LDHA-220ENST00000542179 GTF2E1P29083 439 aaPredicted RBP11.32□□□□□ -0.6
LDHA-220ENST00000542179 TFCP2Q12800 502 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 LRRC24Q50LG9 513 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 TNNI3KQ59H18 835 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 TAF7LQ5H9L4 462 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 GPR153Q6NV75 609 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 AACSQ86V21 672 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 ECHDC1Q9NTX5 307 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 RIPOR2Q9Y4F9 1068 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.32□□□□□ -0.6
LDHA-220ENST00000542179 FPGT-TNNI3KV9GXZ4 949 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 QSER1Q2KHR3 1735 aa11.32□□□□□ -0.6
LDHA-220ENST00000542179 LRP5O75197 1615 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 TUBGCP6Q96RT7 1819 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 ERC2O15083 957 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 GLRX3O76003 335 aaKnown RBP11.31□□□□□ -0.6
LDHA-220ENST00000542179 SLC15A2Q16348 729 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 LDHAL6AQ6ZMR3 332 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 PI4K2BQ8TCG2 481 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 GPATCH3Q96I76 525 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 NLRP3Q96P20 1036 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 CCDC85AQ96PX6 553 aaPredicted RBP11.31□□□□□ -0.6
LDHA-220ENST00000542179 PUS3Q9BZE2 481 aaKnown RBP11.31□□□□□ -0.6
LDHA-220ENST00000542179 CEP126Q9P2H0 1117 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 PNPLA7Q6ZV29 1317 aa11.31□□□□□ -0.6
LDHA-220ENST00000542179 ABCC12Q96J65 1359 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 EP400Q96L91 3159 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 POTEB3A0JP26 581 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 EIF5BO60841 1220 aaKnown RBP11.3□□□□□ -0.6
LDHA-220ENST00000542179 SERPINB2P05120 415 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 ARSIQ5FYB1 569 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 POTEBQ6S5H4 581 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 STK32BQ9NY57 414 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 AKAP2Q9Y2D5 859 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 RBM19Q9Y4C8 960 aaKnown RBP11.3□□□□□ -0.6
LDHA-220ENST00000542179 MROH5Q6ZUA9 1318 aa11.3□□□□□ -0.6
LDHA-220ENST00000542179 POLRMTO00411 1230 aaKnown RBP11.29□□□□□ -0.6
LDHA-220ENST00000542179 CDC45O75419 566 aa11.29□□□□□ -0.6
LDHA-220ENST00000542179 SDSP20132 328 aa11.29□□□□□ -0.6
LDHA-220ENST00000542179 PRR5LQ6MZQ0 368 aa11.29□□□□□ -0.6
LDHA-220ENST00000542179 CNBD1Q8NA66 436 aa11.29□□□□□ -0.6
LDHA-220ENST00000542179 CDC5LQ99459 802 aaKnown RBP11.29□□□□□ -0.6
LDHA-220ENST00000542179 CCDC8Q9H0W5 538 aaPredicted RBP11.29□□□□□ -0.6
LDHA-220ENST00000542179 BCL11AQ9H165 835 aa11.29□□□□□ -0.6
LDHA-220ENST00000542179 SEC31BQ9NQW1 1179 aa11.29□□□□□ -0.6
LDHA-220ENST00000542179 CNNM1Q9NRU3 951 aa11.29□□□□□ -0.6
LDHA-220ENST00000542179 DBNLQ9UJU6 430 aaKnown RBP11.29□□□□□ -0.6
LDHA-220ENST00000542179 PDE8BO95263 885 aa11.28□□□□□ -0.6
LDHA-220ENST00000542179 ATP5JP18859 108 aa11.28□□□□□ -0.6
LDHA-220ENST00000542179 IGHMBP2P38935 993 aaKnown RBP11.28□□□□□ -0.6
LDHA-220ENST00000542179 DDR1Q08345 913 aa11.28□□□□□ -0.6
LDHA-220ENST00000542179 VGLL2Q8N8G2 317 aa11.28□□□□□ -0.6
LDHA-220ENST00000542179 MPHOSPH8Q99549 860 aa11.28□□□□□ -0.6
LDHA-220ENST00000542179 ANO8Q9HCE9 1232 aaPredicted RBP11.28□□□□□ -0.6
LDHA-220ENST00000542179 NRXN2Q9P2S2 1712 aa11.28□□□□□ -0.6
LDHA-220ENST00000542179 CASZ1Q86V15 1759 aa11.28□□□□□ -0.6
LDHA-220ENST00000542179 ZNF609O15014 1411 aa11.27□□□□□ -0.6
LDHA-220ENST00000542179 A0A1B0GUL7 405 aa11.27□□□□□ -0.61
LDHA-220ENST00000542179 KLRG2A4D1S0 409 aaPredicted RBP11.27□□□□□ -0.61
LDHA-220ENST00000542179 ST5P78524 1137 aa11.27□□□□□ -0.61
LDHA-220ENST00000542179 CRY2Q49AN0 593 aa11.27□□□□□ -0.61
LDHA-220ENST00000542179 METTL24Q5JXM2 366 aa11.27□□□□□ -0.61
LDHA-220ENST00000542179 TSHZ3Q63HK5 1081 aa11.27□□□□□ -0.61
LDHA-220ENST00000542179 DEFB132Q7Z7B7 95 aa11.27□□□□□ -0.61
LDHA-220ENST00000542179 ANKRD18AQ8IVF6 992 aa11.27□□□□□ -0.61
LDHA-220ENST00000542179 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.27□□□□□ -0.61
LDHA-220ENST00000542179 DBNDD2Q9BQY9 259 aa11.27□□□□□ -0.61
LDHA-220ENST00000542179 BSDC1Q9NW68 430 aaPredicted RBP11.27□□□□□ -0.61
LDHA-220ENST00000542179 TLR7Q9NYK1 1049 aaKnown RBP11.27□□□□□ -0.61
LDHA-220ENST00000542179 NPHP1O15259 732 aa11.26□□□□□ -0.61
LDHA-220ENST00000542179 SLC34A2O95436 690 aa11.26□□□□□ -0.61
LDHA-220ENST00000542179 TIMM10P62072 90 aa11.26□□□□□ -0.61
LDHA-220ENST00000542179 RPS8P62241 208 aaKnown RBP11.26□□□□□ -0.61
LDHA-220ENST00000542179 VARS2Q5ST30 1063 aaKnown RBP11.26□□□□□ -0.61
LDHA-220ENST00000542179 TBC1D9Q6ZT07 1266 aa11.26□□□□□ -0.61
LDHA-220ENST00000542179 TICAM2Q86XR7 235 aa11.26□□□□□ -0.61
LDHA-220ENST00000542179 TNRC6CQ9HCJ0 1690 aaKnown RBP11.26□□□□□ -0.61
LDHA-220ENST00000542179 TRIM6-TRIM34B2RNG4 842 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 FGFR2P21802 821 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 HOXA10P31260 410 aaPredicted RBP11.25□□□□□ -0.61
LDHA-220ENST00000542179 PUM3Q15397 648 aaKnown RBP11.25□□□□□ -0.61
LDHA-220ENST00000542179 ATP2B3Q16720 1220 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 CASC1Q6TDU7 716 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 DDX46Q7L014 1031 aaKnown RBP11.25□□□□□ -0.61
LDHA-220ENST00000542179 CNTROBQ8N137 903 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 LPIN2Q92539 896 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 EVI5LQ96CN4 794 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 ZNF512BQ96KM6 892 aaPredicted RBP11.25□□□□□ -0.61
LDHA-220ENST00000542179 NEUROD6Q96NK8 337 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 BRIP1Q9BX63 1249 aa11.25□□□□□ -0.61
LDHA-220ENST00000542179 MMP10P09238 476 aa11.24□□□□□ -0.61
LDHA-220ENST00000542179 CCDC158Q5M9N0 1113 aa11.24□□□□□ -0.61
LDHA-220ENST00000542179 CCDC24Q8N4L8 307 aa11.24□□□□□ -0.61
LDHA-220ENST00000542179 SLC16A10Q8TF71 515 aa11.24□□□□□ -0.61
LDHA-220ENST00000542179 CELF1Q92879 486 aaKnown RBP11.24□□□□□ -0.61
LDHA-220ENST00000542179 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
LDHA-220ENST00000542179 HAUS7Q99871 368 aa11.24□□□□□ -0.61
LDHA-220ENST00000542179 UPF2Q9HAU5 1272 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms