RNA–Protein interactions for RNA: ENST00000541764.5

LMO3-227, Transcript of LIM domain only 3, humanhuman

TSL 1 (best)

Gene LMO3, Length 1,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-227ENST00000541764 TIMM10P62072 90 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 LRRC24Q50LG9 513 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 CCDC129Q6ZRS4 1044 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 STOX1Q6ZVD7 989 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 ZNF579Q8NAF0 562 aaKnown RBP11.7□□□□□ -0.54
LMO3-227ENST00000541764 ZBTB38Q8NAP3 1195 aaPredicted RBP11.7□□□□□ -0.54
LMO3-227ENST00000541764 DDX54Q8TDD1 881 aaKnown RBP11.7□□□□□ -0.54
LMO3-227ENST00000541764 TMOD3Q9NYL9 352 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 DISP2A7MBM2 1401 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 CCDC57Q2TAC2 916 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 LEO1Q8WVC0 666 aaPredicted RBP11.7□□□□□ -0.54
LMO3-227ENST00000541764 NEUROD6Q96NK8 337 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 ZBTB3Q9H5J0 574 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.7□□□□□ -0.54
LMO3-227ENST00000541764 CTNNA3Q9UI47 895 aa11.7□□□□□ -0.54
LMO3-227ENST00000541764 MAST3O60307 1309 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 WDR19Q8NEZ3 1342 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 SALL1Q9NSC2 1324 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 STARD3NLO95772 234 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 CAVIN2O95810 425 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 TPM3P06753 285 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 SCRN1Q12765 414 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 MAP3K11Q16584 847 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 CCDC158Q5M9N0 1113 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 GIGYF2Q6Y7W6 1299 aaKnown RBP11.69□□□□□ -0.54
LMO3-227ENST00000541764 NSUN7Q8NE18 718 aaKnown RBP11.69□□□□□ -0.54
LMO3-227ENST00000541764 TCEANC2Q96MN5 208 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 USP25Q9UHP3 1055 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 CFAP45Q9UL16 551 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 CHMP3Q9Y3E7 222 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 MAP3K15Q6ZN16 1313 aa11.69□□□□□ -0.54
LMO3-227ENST00000541764 E7EWF7 191 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 HCLS1P14317 486 aaPredicted RBP11.68□□□□□ -0.54
LMO3-227ENST00000541764 GIMAP6Q6P9H5 292 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 KIF6Q6ZMV9 814 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 BRF1Q92994 677 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 SPATA32Q96LK8 384 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 NUP62CLQ9H1M0 184 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 CLSTN2Q9H4D0 955 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 RCOR1Q9UKL0 485 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 NDUFB9Q9Y6M9 179 aa11.68□□□□□ -0.54
LMO3-227ENST00000541764 ERVV-1B6SEH8 477 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 JAK2O60674 1132 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 ADCY5O95622 1261 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 HSPA2P54652 639 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 EVA1CP58658 441 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 FAM200AQ8TCP9 573 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 PIGBQ92521 554 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 XAGE2Q96GT9 111 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 ZNF594Q96JF6 807 aaPredicted RBP11.67□□□□□ -0.54
LMO3-227ENST00000541764 PUS3Q9BZE2 481 aaKnown RBP11.67□□□□□ -0.54
LMO3-227ENST00000541764 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 RIPOR2Q9Y4F9 1068 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
LMO3-227ENST00000541764 BCL9O00512 1426 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 ATRNO75882 1429 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 CTDNEP1O95476 244 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 CHGBP05060 677 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 LIG1P18858 919 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 ADD1P35611 737 aaKnown RBP11.66□□□□□ -0.54
LMO3-227ENST00000541764 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
LMO3-227ENST00000541764 FERMT3Q86UX7 667 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 APPBP2Q92624 585 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 OSBP2Q969R2 916 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 AK7Q96M32 723 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 PLCH1Q4KWH8 1693 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 RIC1Q4ADV7 1423 aa11.66□□□□□ -0.54
LMO3-227ENST00000541764 GOLGA6L4A6NEF3 574 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 H3BQV1 296 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 M0R2C6 588 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 CTAGE5O15320 804 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 HSP90B1P14625 803 aaKnown RBP11.65□□□□□ -0.54
LMO3-227ENST00000541764 PDIA3P30101 505 aaKnown RBP11.65□□□□□ -0.54
LMO3-227ENST00000541764 TYRO3Q06418 890 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 KIAA2012Q0VF49 1180 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 STK3Q13188 491 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 TTC39AQ5SRH9 613 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 IFFO2Q5TF58 517 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 ZSCAN25Q6NSZ9 544 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 DNAJC10Q8IXB1 793 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 PGBD1Q96JS3 809 aa11.65□□□□□ -0.54
LMO3-227ENST00000541764 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.65□□□□□ -0.54
LMO3-227ENST00000541764 COL14A1Q05707 1796 aaKnown RBP11.65□□□□□ -0.54
LMO3-227ENST00000541764 LRP5O75197 1615 aa11.65□□□□□ -0.55
LMO3-227ENST00000541764 POTEB2H3BUK9 544 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 FOXP2O15409 715 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 PTMAP06454 111 aaKnown RBP11.64□□□□□ -0.55
LMO3-227ENST00000541764 IMMTQ16891 758 aaKnown RBP11.64□□□□□ -0.55
LMO3-227ENST00000541764 NLRP10Q86W26 655 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 TTLL11Q8NHH1 800 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 PIBF1Q8WXW3 757 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 ZNF396Q96N95 335 aaPredicted RBP11.64□□□□□ -0.55
LMO3-227ENST00000541764 TNMDQ9H2S6 317 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 SPTLC3Q9NUV7 552 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 DACT1Q9NYF0 836 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 ASAP1Q9ULH1 1129 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 MRVI1Q9Y6F6 885 aa11.64□□□□□ -0.55
LMO3-227ENST00000541764 ANKRD36CQ5JPF3 1778 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms