RNA–Protein interactions for RNA: ENST00000540809.1

PHC1-209, Transcript of polyhomeotic homolog 1, humanhuman

TSL 2

Gene PHC1, Length 793 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-209ENST00000540809 DIAPH1O60610 1272 aaKnown RBP10.22□□□□□ -0.77
PHC1-209ENST00000540809 VARSP26640 1264 aaKnown RBP10.22□□□□□ -0.77
PHC1-209ENST00000540809 PRPF38BQ5VTL8 546 aaKnown RBP10.22□□□□□ -0.77
PHC1-209ENST00000540809 RIC3Q7Z5B4 369 aa10.22□□□□□ -0.77
PHC1-209ENST00000540809 IL17REQ8NFR9 667 aa10.22□□□□□ -0.77
PHC1-209ENST00000540809 NMRK2Q9NPI5 230 aa10.22□□□□□ -0.77
PHC1-209ENST00000540809 WASF2Q9Y6W5 498 aa10.22□□□□□ -0.77
PHC1-209ENST00000540809 SOS1Q07889 1333 aaPredicted RBP10.22□□□□□ -0.77
PHC1-209ENST00000540809 NFIXQ14938 502 aa10.21□□□□□ -0.77
PHC1-209ENST00000540809 DALRD3Q5D0E6 543 aaKnown RBP10.21□□□□□ -0.77
PHC1-209ENST00000540809 C9orf131Q5VYM1 1079 aa10.21□□□□□ -0.77
PHC1-209ENST00000540809 KLF16Q9BXK1 252 aaPredicted RBP10.21□□□□□ -0.77
PHC1-209ENST00000540809 NARFQ9UHQ1 456 aa10.21□□□□□ -0.77
PHC1-209ENST00000540809 ZBTB1Q9Y2K1 713 aa10.21□□□□□ -0.77
PHC1-209ENST00000540809 CANXP27824 592 aaKnown RBP10.2□□□□□ -0.78
PHC1-209ENST00000540809 PRELPP51888 382 aa10.2□□□□□ -0.78
PHC1-209ENST00000540809 VIRMAQ69YN4 1812 aaKnown RBP10.2□□□□□ -0.78
PHC1-209ENST00000540809 KCPQ6ZWJ8 1503 aa10.2□□□□□ -0.78
PHC1-209ENST00000540809 DNAJC5GQ8N7S2 189 aa10.2□□□□□ -0.78
PHC1-209ENST00000540809 ZBTB3Q9H5J0 574 aa10.2□□□□□ -0.78
PHC1-209ENST00000540809 MAP10Q9P2G4 905 aa10.2□□□□□ -0.78
PHC1-209ENST00000540809 LIMD1Q9UGP4 676 aa10.2□□□□□ -0.78
PHC1-209ENST00000540809 TOMM70O94826 608 aa10.19□□□□□ -0.78
PHC1-209ENST00000540809 PHACTR3Q96KR7 559 aa10.19□□□□□ -0.78
PHC1-209ENST00000540809 MRC1P22897 1456 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 U2SURPO15042 1029 aaKnown RBP10.18□□□□□ -0.78
PHC1-209ENST00000540809 KCNQ3O43525 872 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 SERPINB2P05120 415 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 EIF5P55010 431 aaKnown RBP10.18□□□□□ -0.78
PHC1-209ENST00000540809 PDE4DQ08499 809 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 TUSC1Q2TAM9 212 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 C4orf48Q5BLP8 95 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 MYSM1Q5VVJ2 828 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 FOXJ1Q92949 421 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 ZNF496Q96IT1 587 aaPredicted RBP10.18□□□□□ -0.78
PHC1-209ENST00000540809 CDK15Q96Q40 435 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 AFDNP55196 1824 aaKnown RBP10.18□□□□□ -0.78
PHC1-209ENST00000540809 ARFGEF1Q9Y6D6 1849 aa10.18□□□□□ -0.78
PHC1-209ENST00000540809 COL3A1P02461 1466 aaPredicted RBP10.17□□□□□ -0.78
PHC1-209ENST00000540809 COL15A1P39059 1388 aa10.17□□□□□ -0.78
PHC1-209ENST00000540809 HTRA3P83110 453 aa10.17□□□□□ -0.78
PHC1-209ENST00000540809 NNTQ13423 1086 aa10.17□□□□□ -0.78
PHC1-209ENST00000540809 QPCTQ16769 361 aa10.17□□□□□ -0.78
PHC1-209ENST00000540809 BICDL1Q6ZP65 573 aa10.17□□□□□ -0.78
PHC1-209ENST00000540809 RRAGCQ9HB90 399 aa10.17□□□□□ -0.78
PHC1-209ENST00000540809 RNF181Q9P0P0 153 aa10.17□□□□□ -0.78
PHC1-209ENST00000540809 SBF1O95248 1867 aa10.17□□□□□ -0.78
PHC1-209ENST00000540809 GNAT3A8MTJ3 354 aa10.16□□□□□ -0.78
PHC1-209ENST00000540809 A1BGP04217 495 aa10.16□□□□□ -0.78
PHC1-209ENST00000540809 TIMP2P16035 220 aa10.16□□□□□ -0.78
PHC1-209ENST00000540809 CTHP32929 405 aa10.16□□□□□ -0.78
PHC1-209ENST00000540809 RASSF7Q02833 373 aa10.16□□□□□ -0.78
PHC1-209ENST00000540809 TBC1D9BQ66K14 1250 aa10.16□□□□□ -0.78
PHC1-209ENST00000540809 ZNF790Q6PG37 636 aa10.16□□□□□ -0.78
PHC1-209ENST00000540809 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
PHC1-209ENST00000540809 CARMIL3Q8ND23 1372 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 NPC1L1Q9UHC9 1359 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 LILRB3O75022 631 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 STARD3NLO95772 234 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 C2CD5Q86YS7 1000 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 ZFP42Q96MM3 310 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 NXF1Q9UBU9 619 aaKnown RBP10.15□□□□□ -0.78
PHC1-209ENST00000540809 USP16Q9Y5T5 823 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 UBR2Q8IWV8 1755 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 NRXN2Q9P2S2 1712 aa10.15□□□□□ -0.78
PHC1-209ENST00000540809 HEG1Q9ULI3 1381 aa10.14□□□□□ -0.79
PHC1-209ENST00000540809 PRAMEF22A3QJZ6 481 aa10.14□□□□□ -0.79
PHC1-209ENST00000540809 PRKAR2BP31323 418 aa10.14□□□□□ -0.79
PHC1-209ENST00000540809 PIP4K2AP48426 406 aaPredicted RBP10.14□□□□□ -0.79
PHC1-209ENST00000540809 TEFQ10587 303 aa10.14□□□□□ -0.79
PHC1-209ENST00000540809 TTC5Q8N0Z6 440 aa10.14□□□□□ -0.79
PHC1-209ENST00000540809 TTLL6Q8N841 843 aa10.14□□□□□ -0.79
PHC1-209ENST00000540809 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
PHC1-209ENST00000540809 H0YIN7 160 aa10.13□□□□□ -0.79
PHC1-209ENST00000540809 NFKBIEO00221 500 aa10.13□□□□□ -0.79
PHC1-209ENST00000540809 ADH1CP00326 375 aa10.13□□□□□ -0.79
PHC1-209ENST00000540809 GAS2L2Q8NHY3 880 aa10.13□□□□□ -0.79
PHC1-209ENST00000540809 FAM174AQ8TBP5 190 aa10.13□□□□□ -0.79
PHC1-209ENST00000540809 ZNF330Q9Y3S2 320 aaPredicted RBP10.13□□□□□ -0.79
PHC1-209ENST00000540809 PCNTO95613 3336 aa10.13□□□□□ -0.79
PHC1-209ENST00000540809 CEMIPQ8WUJ3 1361 aa10.13□□□□□ -0.79
PHC1-209ENST00000540809 SIPA1L3O60292 1781 aaPredicted RBP10.12□□□□□ -0.79
PHC1-209ENST00000540809 A0A087WZG4 1122 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 BTBD11A6QL63 1104 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 LORP23490 312 aaPredicted RBP10.12□□□□□ -0.79
PHC1-209ENST00000540809 PPP2R1AP30153 589 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 IL6STP40189 918 aaPredicted RBP10.12□□□□□ -0.79
PHC1-209ENST00000540809 GRM5P41594 1212 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 DCTN1Q14203 1278 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 CSPP1Q1MSJ5 1256 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 PRR5LQ6MZQ0 368 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 FMNL2Q96PY5 1086 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 TEX13AQ9BXU3 409 aaPredicted RBP10.12□□□□□ -0.79
PHC1-209ENST00000540809 SLC24A3Q9HC58 644 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 STK17AQ9UEE5 414 aa10.12□□□□□ -0.79
PHC1-209ENST00000540809 KDM2BQ8NHM5 1336 aa10.11□□□□□ -0.79
PHC1-209ENST00000540809 CCDC88AQ3V6T2 1871 aa10.11□□□□□ -0.79
PHC1-209ENST00000540809 ANKRD31Q8N7Z5 1873 aa10.11□□□□□ -0.79
PHC1-209ENST00000540809 CAMTA2O94983 1202 aa10.11□□□□□ -0.79
PHC1-209ENST00000540809 LMNB1P20700 586 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms