RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 VIL1P09327 827 aaKnown RBP11.28□□□□□ -0.6
PXN-209ENST00000540221 IFIT1P09914 478 aaKnown RBP11.28□□□□□ -0.6
PXN-209ENST00000540221 RLBP1P12271 317 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 EPHX2P34913 555 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 PUM3Q15397 648 aaKnown RBP11.28□□□□□ -0.6
PXN-209ENST00000540221 CAVIN4Q5BKX8 364 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 STRIP1Q5VSL9 837 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 USP50Q70EL3 339 aaPredicted RBP11.28□□□□□ -0.6
PXN-209ENST00000540221 USP17L1Q7RTZ2 530 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 LDHDQ86WU2 507 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 AGBL3Q8NEM8 1001 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 HELBQ8NG08 1087 aaPredicted RBP11.28□□□□□ -0.6
PXN-209ENST00000540221 PANK1Q8TE04 598 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 PUS3Q9BZE2 481 aaKnown RBP11.28□□□□□ -0.6
PXN-209ENST00000540221 ADARB2Q9NS39 739 aaKnown RBP11.28□□□□□ -0.6
PXN-209ENST00000540221 GPRC5DQ9NZD1 345 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
PXN-209ENST00000540221 PSMD14O00487 310 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.61
PXN-209ENST00000540221 SCNN1DP51172 638 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 ATP8B2P98198 1209 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 LRRC24Q50LG9 513 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 VGLL2Q8N8G2 317 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 LPIN2Q92539 896 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 GPR101Q96P66 508 aaPredicted RBP11.27□□□□□ -0.61
PXN-209ENST00000540221 CD209Q9NNX6 404 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 AKAP2Q9Y2D5 859 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 TAF1P21675 1872 aa11.27□□□□□ -0.61
PXN-209ENST00000540221 SLC5A1P13866 664 aa11.26□□□□□ -0.61
PXN-209ENST00000540221 IL1R1P14778 569 aa11.26□□□□□ -0.61
PXN-209ENST00000540221 HIBADHP31937 336 aaKnown RBP11.26□□□□□ -0.61
PXN-209ENST00000540221 FKBP1AP62942 108 aaKnown RBP11.26□□□□□ -0.61
PXN-209ENST00000540221 RSBN1LQ6PCB5 846 aaPredicted RBP11.26□□□□□ -0.61
PXN-209ENST00000540221 ATG9AQ7Z3C6 839 aa11.26□□□□□ -0.61
PXN-209ENST00000540221 VPS37DQ86XT2 251 aa11.26□□□□□ -0.61
PXN-209ENST00000540221 RPAP2Q8IXW5 612 aaPredicted RBP11.26□□□□□ -0.61
PXN-209ENST00000540221 KLHDC4Q8TBB5 520 aa11.26□□□□□ -0.61
PXN-209ENST00000540221 SSH3Q8TE77 659 aa11.26□□□□□ -0.61
PXN-209ENST00000540221 ZC3H15Q8WU90 426 aaKnown RBP11.26□□□□□ -0.61
PXN-209ENST00000540221 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
PXN-209ENST00000540221 IRS2Q9Y4H2 1338 aa11.26□□□□□ -0.61
PXN-209ENST00000540221 CCDC88AQ3V6T2 1871 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 ZBTB22O15209 634 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 HMMRO75330 724 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 SASH1O94885 1247 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
PXN-209ENST00000540221 POLA2Q14181 598 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 TTLL5Q6EMB2 1281 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 CHADLQ6NUI6 762 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 TXNRD3Q86VQ6 643 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 OGFOD1Q8N543 542 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 SIL1Q9H173 461 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 COG6Q9Y2V7 657 aa11.25□□□□□ -0.61
PXN-209ENST00000540221 SCN4AP35499 1836 aa11.24□□□□□ -0.61
PXN-209ENST00000540221 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
PXN-209ENST00000540221 FGFR2P21802 821 aa11.24□□□□□ -0.61
PXN-209ENST00000540221 EPS15P42566 896 aa11.24□□□□□ -0.61
PXN-209ENST00000540221 EAPPQ56P03 285 aaPredicted RBP11.24□□□□□ -0.61
PXN-209ENST00000540221 HSP90AB4PQ58FF6 505 aa11.24□□□□□ -0.61
PXN-209ENST00000540221 DACT2Q5SW24 774 aa11.24□□□□□ -0.61
PXN-209ENST00000540221 FBXO33Q7Z6M2 555 aa11.24□□□□□ -0.61
PXN-209ENST00000540221 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
PXN-209ENST00000540221 FAM84BQ96KN1 310 aaPredicted RBP11.24□□□□□ -0.61
PXN-209ENST00000540221 ZBTB40Q9NUA8 1239 aa11.24□□□□□ -0.61
PXN-209ENST00000540221 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
PXN-209ENST00000540221 PNMA6EA0A0J9YXQ4 647 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 SNAP23O00161 211 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 FRAT2O75474 233 aaPredicted RBP11.23□□□□□ -0.61
PXN-209ENST00000540221 USP17L8P0C7I0 530 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 KLRK1P26718 216 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 RRP1P56182 461 aaKnown RBP11.23□□□□□ -0.61
PXN-209ENST00000540221 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
PXN-209ENST00000540221 AAMPQ13685 434 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 ATP2B3Q16720 1220 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 CEP85Q6P2H3 762 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 ERC1Q8IUD2 1116 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 TDRD7Q8NHU6 1098 aaKnown RBP11.23□□□□□ -0.61
PXN-209ENST00000540221 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 GMLQ99445 158 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 KCNQ5Q9NR82 932 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 HDAC9Q9UKV0 1011 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 PA2G4Q9UQ80 394 aaKnown RBP11.23□□□□□ -0.61
PXN-209ENST00000540221 CLEC11AQ9Y240 323 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 NOP58Q9Y2X3 529 aaKnown RBP11.23□□□□□ -0.61
PXN-209ENST00000540221 ZBTB12Q9Y330 459 aaPredicted RBP11.23□□□□□ -0.61
PXN-209ENST00000540221 FAM205AQ6ZU69 1335 aa11.23□□□□□ -0.61
PXN-209ENST00000540221 SEMA3EO15041 775 aa11.22□□□□□ -0.61
PXN-209ENST00000540221 HSPA6P17066 643 aa11.22□□□□□ -0.61
PXN-209ENST00000540221 GTF2IP78347 998 aa11.22□□□□□ -0.61
PXN-209ENST00000540221 OS9Q13438 667 aaPredicted RBP11.22□□□□□ -0.61
PXN-209ENST00000540221 FBXW7Q969H0 707 aa11.22□□□□□ -0.61
PXN-209ENST00000540221 GPR108Q9NPR9 543 aa11.22□□□□□ -0.61
PXN-209ENST00000540221 PGAP2Q9UHJ9 254 aa11.22□□□□□ -0.61
PXN-209ENST00000540221 SURF6O75683 361 aaKnown RBP11.21□□□□□ -0.61
PXN-209ENST00000540221 GYG1P46976 350 aa11.21□□□□□ -0.61
PXN-209ENST00000540221 APLP1P51693 650 aa11.21□□□□□ -0.61
PXN-209ENST00000540221 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
PXN-209ENST00000540221 SUGT1Q9Y2Z0 365 aa11.21□□□□□ -0.61
PXN-209ENST00000540221 TFCP2Q12800 502 aa11.2□□□□□ -0.62
PXN-209ENST00000540221 KIF4BQ2VIQ3 1234 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms