RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 SIL1Q9H173 461 aa27.45■■□□□ 1.98
TRIM65-202ENST00000540128 A0A1B0GUL6 1792 aa27.45■■□□□ 1.98
TRIM65-202ENST00000540128 RRAGCQ9HB90 399 aa27.44■■□□□ 1.98
TRIM65-202ENST00000540128 G3V3G9 751 aa27.43■■□□□ 1.98
TRIM65-202ENST00000540128 KIF3CO14782 793 aa27.43■■□□□ 1.98
TRIM65-202ENST00000540128 RAD17O75943 681 aa27.43■■□□□ 1.98
TRIM65-202ENST00000540128 VEGFAP15692 232 aaPredicted RBP27.43■■□□□ 1.98
TRIM65-202ENST00000540128 DCAF8Q5TAQ9 597 aa27.43■■□□□ 1.98
TRIM65-202ENST00000540128 RPAP2Q8IXW5 612 aaPredicted RBP27.43■■□□□ 1.98
TRIM65-202ENST00000540128 CEP126Q9P2H0 1117 aa27.43■■□□□ 1.98
TRIM65-202ENST00000540128 WDR90Q96KV7 1748 aa27.43■■□□□ 1.98
TRIM65-202ENST00000540128 FGFR2P21802 821 aa27.42■■□□□ 1.98
TRIM65-202ENST00000540128 KCNQ5Q9NR82 932 aa27.42■■□□□ 1.98
TRIM65-202ENST00000540128 NOP58Q9Y2X3 529 aaKnown RBP27.41■■□□□ 1.98
TRIM65-202ENST00000540128 GJA3Q9Y6H8 435 aa27.41■■□□□ 1.98
TRIM65-202ENST00000540128 PUM3Q15397 648 aaKnown RBP27.4■■□□□ 1.98
TRIM65-202ENST00000540128 CD209Q9NNX6 404 aa27.4■■□□□ 1.98
TRIM65-202ENST00000540128 PSMD14O00487 310 aa27.39■■□□□ 1.98
TRIM65-202ENST00000540128 VIL1P09327 827 aaKnown RBP27.39■■□□□ 1.98
TRIM65-202ENST00000540128 FAM84BQ96KN1 310 aaPredicted RBP27.39■■□□□ 1.98
TRIM65-202ENST00000540128 IQCA1LA6NCM1 817 aa27.38■■□□□ 1.97
TRIM65-202ENST00000540128 IL1R1P14778 569 aa27.38■■□□□ 1.97
TRIM65-202ENST00000540128 G3BP1Q13283 466 aaKnown RBP eCLIP27.38■■□□□ 1.97
TRIM65-202ENST00000540128 ZNF804AQ7Z570 1209 aa27.38■■□□□ 1.97
TRIM65-202ENST00000540128 SCN9AQ15858 1988 aa27.37■■□□□ 1.97
TRIM65-202ENST00000540128 SCNN1DP51172 638 aa27.37■■□□□ 1.97
TRIM65-202ENST00000540128 FBXO33Q7Z6M2 555 aa27.37■■□□□ 1.97
TRIM65-202ENST00000540128 SIRT2Q8IXJ6 389 aa27.37■■□□□ 1.97
TRIM65-202ENST00000540128 LPIN2Q92539 896 aa27.37■■□□□ 1.97
TRIM65-202ENST00000540128 USP17L3A6NCW0 530 aa27.36■■□□□ 1.97
TRIM65-202ENST00000540128 USP17L4A6NCW7 530 aa27.36■■□□□ 1.97
TRIM65-202ENST00000540128 IFIT1P09914 478 aaKnown RBP27.36■■□□□ 1.97
TRIM65-202ENST00000540128 USP17L1Q7RTZ2 530 aa27.36■■□□□ 1.97
TRIM65-202ENST00000540128 DPF2Q92785 391 aa27.36■■□□□ 1.97
TRIM65-202ENST00000540128 SURF6O75683 361 aaKnown RBP27.35■■□□□ 1.97
TRIM65-202ENST00000540128 RPS12P25398 132 aaKnown RBP27.35■■□□□ 1.97
TRIM65-202ENST00000540128 HIBADHP31937 336 aaKnown RBP27.35■■□□□ 1.97
TRIM65-202ENST00000540128 GMPSP49915 693 aaPredicted RBP27.35■■□□□ 1.97
TRIM65-202ENST00000540128 STRIP1Q5VSL9 837 aa27.35■■□□□ 1.97
TRIM65-202ENST00000540128 HACL1Q9UJ83 578 aa27.35■■□□□ 1.97
TRIM65-202ENST00000540128 SUPT16HQ9Y5B9 1047 aaKnown RBP27.35■■□□□ 1.97
TRIM65-202ENST00000540128 ZNF609O15014 1411 aa27.34■■□□□ 1.97
TRIM65-202ENST00000540128 SLC5A1P13866 664 aa27.34■■□□□ 1.97
TRIM65-202ENST00000540128 GYG1P46976 350 aa27.34■■□□□ 1.97
TRIM65-202ENST00000540128 TFCP2Q12800 502 aa27.34■■□□□ 1.97
TRIM65-202ENST00000540128 ATP2B3Q16720 1220 aa27.34■■□□□ 1.97
TRIM65-202ENST00000540128 TDRD7Q8NHU6 1098 aaKnown RBP27.34■■□□□ 1.97
TRIM65-202ENST00000540128 TAF1DQ9H5J8 278 aaPredicted RBP27.34■■□□□ 1.97
TRIM65-202ENST00000540128 GPRC5DQ9NZD1 345 aa27.34■■□□□ 1.97
TRIM65-202ENST00000540128 SCN4AP35499 1836 aa27.34■■□□□ 1.97
TRIM65-202ENST00000540128 HMMRO75330 724 aa27.33■■□□□ 1.97
TRIM65-202ENST00000540128 SASH1O94885 1247 aa27.33■■□□□ 1.97
TRIM65-202ENST00000540128 CAVIN4Q5BKX8 364 aa27.33■■□□□ 1.97
TRIM65-202ENST00000540128 DACT2Q5SW24 774 aa27.33■■□□□ 1.97
TRIM65-202ENST00000540128 AKAP2Q9Y2D5 859 aa27.33■■□□□ 1.97
TRIM65-202ENST00000540128 LMOD1P29536 600 aaPredicted RBP27.32■■□□□ 1.96
TRIM65-202ENST00000540128 TTLL5Q6EMB2 1281 aa27.32■■□□□ 1.96
TRIM65-202ENST00000540128 RSBN1LQ6PCB5 846 aaPredicted RBP27.32■■□□□ 1.96
TRIM65-202ENST00000540128 AGBL3Q8NEM8 1001 aa27.32■■□□□ 1.96
TRIM65-202ENST00000540128 CRBNQ96SW2 442 aa27.32■■□□□ 1.96
TRIM65-202ENST00000540128 GMLQ99445 158 aa27.32■■□□□ 1.96
TRIM65-202ENST00000540128 ZBTB12Q9Y330 459 aaPredicted RBP27.32■■□□□ 1.96
TRIM65-202ENST00000540128 EPHX2P34913 555 aa27.31■■□□□ 1.96
TRIM65-202ENST00000540128 EPS15P42566 896 aa27.31■■□□□ 1.96
TRIM65-202ENST00000540128 GPR108Q9NPR9 543 aa27.31■■□□□ 1.96
TRIM65-202ENST00000540128 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.31■■□□□ 1.96
TRIM65-202ENST00000540128 PSME4Q14997 1843 aa27.3■■□□□ 1.96
TRIM65-202ENST00000540128 ZBTB22O15209 634 aa27.3■■□□□ 1.96
TRIM65-202ENST00000540128 TOMM70O94826 608 aa27.3■■□□□ 1.96
TRIM65-202ENST00000540128 BCAMP50895 628 aa27.29■■□□□ 1.96
TRIM65-202ENST00000540128 GTF2IP78347 998 aa27.29■■□□□ 1.96
TRIM65-202ENST00000540128 CNOT7Q9UIV1 285 aaKnown RBP27.29■■□□□ 1.96
TRIM65-202ENST00000540128 FAM205AQ6ZU69 1335 aa27.29■■□□□ 1.96
TRIM65-202ENST00000540128 TIMM10P62072 90 aa27.28■■□□□ 1.96
TRIM65-202ENST00000540128 FKBP1AP62942 108 aaKnown RBP27.28■■□□□ 1.96
TRIM65-202ENST00000540128 AAMPQ13685 434 aa27.28■■□□□ 1.96
TRIM65-202ENST00000540128 HSP90AB4PQ58FF6 505 aa27.28■■□□□ 1.96
TRIM65-202ENST00000540128 PNMA8AQ86V59 439 aaPredicted RBP27.28■■□□□ 1.96
TRIM65-202ENST00000540128 VPS37DQ86XT2 251 aa27.28■■□□□ 1.96
TRIM65-202ENST00000540128 C16orf71Q8IYS4 520 aaPredicted RBP27.28■■□□□ 1.96
TRIM65-202ENST00000540128 RBM46Q8TBY0 533 aaKnown RBP27.28■■□□□ 1.96
TRIM65-202ENST00000540128 MYO3BQ8WXR4 1341 aa27.27■■□□□ 1.96
TRIM65-202ENST00000540128 A0A1B0GUL7 405 aa27.27■■□□□ 1.96
TRIM65-202ENST00000540128 OS9Q13438 667 aaPredicted RBP27.27■■□□□ 1.96
TRIM65-202ENST00000540128 ADARB2Q9NS39 739 aaKnown RBP27.27■■□□□ 1.96
TRIM65-202ENST00000540128 ERC1Q8IUD2 1116 aa27.26■■□□□ 1.95
TRIM65-202ENST00000540128 EXOC6BQ9Y2D4 811 aa27.26■■□□□ 1.95
TRIM65-202ENST00000540128 PCDHB15Q9Y5E8 787 aa27.26■■□□□ 1.95
TRIM65-202ENST00000540128 H7C1D1 291 aa27.25■■□□□ 1.95
TRIM65-202ENST00000540128 MMP14P50281 582 aa27.25■■□□□ 1.95
TRIM65-202ENST00000540128 ZNF280AP59817 542 aaPredicted RBP27.25■■□□□ 1.95
TRIM65-202ENST00000540128 USP50Q70EL3 339 aaPredicted RBP27.25■■□□□ 1.95
TRIM65-202ENST00000540128 MICALL2Q8IY33 904 aa27.25■■□□□ 1.95
TRIM65-202ENST00000540128 ADORA1P30542 326 aa27.24■■□□□ 1.95
TRIM65-202ENST00000540128 XAGE2Q96GT9 111 aa27.24■■□□□ 1.95
TRIM65-202ENST00000540128 MXD3Q9BW11 206 aa27.24■■□□□ 1.95
TRIM65-202ENST00000540128 ZNF646O15015 1829 aaPredicted RBP27.23■■□□□ 1.95
TRIM65-202ENST00000540128 SHTN1A0MZ66 631 aa27.23■■□□□ 1.95
TRIM65-202ENST00000540128 USP17L8P0C7I0 530 aa27.23■■□□□ 1.95
TRIM65-202ENST00000540128 TNNI3KQ59H18 835 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms