RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
TNFRSF1A-213ENST00000540022 ADORA1P30542 326 aa23.21■■□□□ 1.31
TNFRSF1A-213ENST00000540022 XAGE2Q96GT9 111 aa23.21■■□□□ 1.31
TNFRSF1A-213ENST00000540022 GPBP1L1Q9HC44 474 aaPredicted RBP23.21■■□□□ 1.31
TNFRSF1A-213ENST00000540022 LRRC37AA6NMS7 1700 aa23.2■■□□□ 1.31
TNFRSF1A-213ENST00000540022 ZNF804BA4D1E1 1349 aa23.2■■□□□ 1.3
TNFRSF1A-213ENST00000540022 SLC5A1P13866 664 aa23.2■■□□□ 1.3
TNFRSF1A-213ENST00000540022 MX1P20591 662 aa23.2■■□□□ 1.3
TNFRSF1A-213ENST00000540022 RASSF7Q02833 373 aa23.2■■□□□ 1.3
TNFRSF1A-213ENST00000540022 TMX4Q9H1E5 349 aaPredicted RBP23.2■■□□□ 1.3
TNFRSF1A-213ENST00000540022 LEMD3Q9Y2U8 911 aa23.2■■□□□ 1.3
TNFRSF1A-213ENST00000540022 IFIT1P09914 478 aaKnown RBP23.19■■□□□ 1.3
TNFRSF1A-213ENST00000540022 KCNJ4P48050 445 aa23.19■■□□□ 1.3
TNFRSF1A-213ENST00000540022 PDE1AP54750 535 aa23.19■■□□□ 1.3
TNFRSF1A-213ENST00000540022 TSHZ3Q63HK5 1081 aa23.19■■□□□ 1.3
TNFRSF1A-213ENST00000540022 MPNDQ8N594 471 aa23.19■■□□□ 1.3
TNFRSF1A-213ENST00000540022 NFKBIEO00221 500 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 ATP2B4P23634 1241 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 PRELPP51888 382 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 RNF181Q9P0P0 153 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 STAP2Q9UGK3 403 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 POLLQ9UGP5 575 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 GGA1Q9UJY5 639 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 UFL1O94874 794 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 KLRK1P26718 216 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 CCDC93Q567U6 631 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 CC2D2BQ6DHV5 1058 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 TBC1D16Q8TBP0 767 aa23.18■■□□□ 1.3
TNFRSF1A-213ENST00000540022 TIAM2Q8IVF5 1701 aa23.17■■□□□ 1.3
TNFRSF1A-213ENST00000540022 A0A1B0GUL6 1792 aa23.17■■□□□ 1.3
TNFRSF1A-213ENST00000540022 DPP8Q6V1X1 898 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF1A-213ENST00000540022 GPR101Q96P66 508 aaPredicted RBP23.17■■□□□ 1.3
TNFRSF1A-213ENST00000540022 OSBPL3Q9H4L5 887 aa23.17■■□□□ 1.3
TNFRSF1A-213ENST00000540022 ECHDC1Q9NTX5 307 aa23.17■■□□□ 1.3
TNFRSF1A-213ENST00000540022 IRS2Q9Y4H2 1338 aa23.16■■□□□ 1.3
TNFRSF1A-213ENST00000540022 C1QTNF8P60827 252 aa23.16■■□□□ 1.3
TNFRSF1A-213ENST00000540022 TXNRD3Q86VQ6 643 aa23.16■■□□□ 1.3
TNFRSF1A-213ENST00000540022 TTC41PQ6P2S7 1318 aa23.15■■□□□ 1.3
TNFRSF1A-213ENST00000540022 C6orf229H3BNL8 230 aa23.15■■□□□ 1.3
TNFRSF1A-213ENST00000540022 GORABQ5T7V8 394 aa23.15■■□□□ 1.3
TNFRSF1A-213ENST00000540022 PI4K2BQ8TCG2 481 aa23.15■■□□□ 1.3
TNFRSF1A-213ENST00000540022 DUOX1Q9NRD9 1551 aa23.15■■□□□ 1.3
TNFRSF1A-213ENST00000540022 LTBP1Q14766 1721 aa23.14■■□□□ 1.3
TNFRSF1A-213ENST00000540022 GPATCH3Q96I76 525 aa23.14■■□□□ 1.3
TNFRSF1A-213ENST00000540022 LMNB1P20700 586 aa23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 PHKA1P46020 1223 aa23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 GYG1P46976 350 aa23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 BCAMP50895 628 aa23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 SOGA3Q5TF21 947 aa23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 CCDC102BQ68D86 513 aa23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 C15orf52Q6ZUT6 534 aaKnown RBP23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 FAM84BQ96KN1 310 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 CCDC158Q5M9N0 1113 aa23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 RTKN2Q8IZC4 609 aa23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 RTFDC1Q9BY42 306 aaPredicted RBP23.13■■□□□ 1.29
TNFRSF1A-213ENST00000540022 AOX1Q06278 1338 aa23.12■■□□□ 1.29
TNFRSF1A-213ENST00000540022 ATP5JP18859 108 aa23.12■■□□□ 1.29
TNFRSF1A-213ENST00000540022 GRIPAP1Q4V328 841 aa23.12■■□□□ 1.29
TNFRSF1A-213ENST00000540022 TTC39AQ5SRH9 613 aa23.12■■□□□ 1.29
TNFRSF1A-213ENST00000540022 KIF3CO14782 793 aa23.11■■□□□ 1.29
TNFRSF1A-213ENST00000540022 ERC2O15083 957 aa23.11■■□□□ 1.29
TNFRSF1A-213ENST00000540022 FKBP4Q02790 459 aaKnown RBP eCLIP23.11■■□□□ 1.29
TNFRSF1A-213ENST00000540022 CAVIN4Q5BKX8 364 aa23.11■■□□□ 1.29
TNFRSF1A-213ENST00000540022 FBXO33Q7Z6M2 555 aa23.11■■□□□ 1.29
TNFRSF1A-213ENST00000540022 ZNF277Q9NRM2 450 aaPredicted RBP23.11■■□□□ 1.29
TNFRSF1A-213ENST00000540022 MED23Q9ULK4 1368 aa23.1■■□□□ 1.29
TNFRSF1A-213ENST00000540022 GLRX3O76003 335 aaKnown RBP23.1■■□□□ 1.29
TNFRSF1A-213ENST00000540022 GSPT1P15170 499 aaKnown RBP23.1■■□□□ 1.29
TNFRSF1A-213ENST00000540022 TTC22Q5TAA0 569 aa23.1■■□□□ 1.29
TNFRSF1A-213ENST00000540022 TAOK3Q9H2K8 898 aa23.1■■□□□ 1.29
TNFRSF1A-213ENST00000540022 BOLA2Q9H3K6 86 aa23.1■■□□□ 1.29
TNFRSF1A-213ENST00000540022 LTBP3Q9NS15 1303 aa23.1■■□□□ 1.29
TNFRSF1A-213ENST00000540022 ARAP2Q8WZ64 1704 aa23.09■■□□□ 1.29
TNFRSF1A-213ENST00000540022 HIBADHP31937 336 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1A-213ENST00000540022 SCARF1Q14162 830 aa23.09■■□□□ 1.29
TNFRSF1A-213ENST00000540022 PSMD1Q99460 953 aa23.09■■□□□ 1.29
TNFRSF1A-213ENST00000540022 ZC3H4Q9UPT8 1303 aaKnown RBP23.09■■□□□ 1.29
TNFRSF1A-213ENST00000540022 RIMBP2O15034 1052 aa23.08■■□□□ 1.29
TNFRSF1A-213ENST00000540022 ARID4AP29374 1257 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF1A-213ENST00000540022 WASHC4Q2M389 1173 aa23.08■■□□□ 1.29
TNFRSF1A-213ENST00000540022 ZNF512BQ96KM6 892 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF1A-213ENST00000540022 EYA3Q99504 573 aa23.08■■□□□ 1.29
TNFRSF1A-213ENST00000540022 ZC3H12CQ9C0D7 883 aaKnown RBP23.08■■□□□ 1.29
TNFRSF1A-213ENST00000540022 UQCRFS1P1P0C7P4 283 aa23.08■■□□□ 1.28
TNFRSF1A-213ENST00000540022 VPS37DQ86XT2 251 aa23.08■■□□□ 1.28
TNFRSF1A-213ENST00000540022 SUPT20HQ8NEM7 779 aa23.08■■□□□ 1.28
TNFRSF1A-213ENST00000540022 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.08■■□□□ 1.28
TNFRSF1A-213ENST00000540022 NMRK2Q9NPI5 230 aa23.08■■□□□ 1.28
TNFRSF1A-213ENST00000540022 MCAMP43121 646 aa23.07■■□□□ 1.28
TNFRSF1A-213ENST00000540022 ZNF804AQ7Z570 1209 aa23.07■■□□□ 1.28
TNFRSF1A-213ENST00000540022 IQSEC3Q9UPP2 1182 aaPredicted RBP23.07■■□□□ 1.28
TNFRSF1A-213ENST00000540022 NDUFB9Q9Y6M9 179 aa23.07■■□□□ 1.28
TNFRSF1A-213ENST00000540022 MAP4K4O95819 1239 aaPredicted RBP23.06■■□□□ 1.28
TNFRSF1A-213ENST00000540022 RASGRF1Q13972 1273 aa23.06■■□□□ 1.28
TNFRSF1A-213ENST00000540022 AOC3Q16853 763 aa23.06■■□□□ 1.28
TNFRSF1A-213ENST00000540022 PI16Q6UXB8 463 aa23.06■■□□□ 1.28
TNFRSF1A-213ENST00000540022 COL4A5P29400 1685 aa23.06■■□□□ 1.28
TNFRSF1A-213ENST00000540022 BMP2KLQ5H9B9 411 aa23.05■■□□□ 1.28
TNFRSF1A-213ENST00000540022 HAUS7Q99871 368 aa23.05■■□□□ 1.28
TNFRSF1A-213ENST00000540022 CD209Q9NNX6 404 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms