RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 RFC5P40937 340 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 TNNT2P45379 298 aaPredicted RBP9.3□□□□□ -0.92
CCDC60-204ENST00000539847 ITPRIPQ8IWB1 547 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 TMEM57Q8N5G2 664 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 TTLL6Q8N841 843 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 RRAGCQ9HB90 399 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 SNRKQ9NRH2 765 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 TSKSQ9UJT2 592 aa9.3□□□□□ -0.92
CCDC60-204ENST00000539847 RRP7AQ9Y3A4 280 aaKnown RBP9.3□□□□□ -0.92
CCDC60-204ENST00000539847 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
CCDC60-204ENST00000539847 PCNTO95613 3336 aa9.29□□□□□ -0.92
CCDC60-204ENST00000539847 CHRNA5P30532 468 aa9.29□□□□□ -0.92
CCDC60-204ENST00000539847 IL13P35225 146 aa9.29□□□□□ -0.92
CCDC60-204ENST00000539847 PRELPP51888 382 aa9.29□□□□□ -0.92
CCDC60-204ENST00000539847 NFIXQ14938 502 aa9.29□□□□□ -0.92
CCDC60-204ENST00000539847 COL13A1Q5TAT6 717 aaPredicted RBP9.29□□□□□ -0.92
CCDC60-204ENST00000539847 SULT6B1Q6IMI4 303 aa9.29□□□□□ -0.92
CCDC60-204ENST00000539847 DDX49Q9Y6V7 483 aaKnown RBP9.29□□□□□ -0.92
CCDC60-204ENST00000539847 TJP1Q07157 1748 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 COL15A1P39059 1388 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 A0A087WZG4 1122 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 TMEM259Q4ZIN3 620 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 PPP4R3BQ5MIZ7 849 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 TBC1D9Q6ZT07 1266 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 DNAJC10Q8IXB1 793 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 SMAP1Q8IYB5 467 aaPredicted RBP9.28□□□□□ -0.92
CCDC60-204ENST00000539847 BCL2L12Q9HB09 334 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 LMBRD1Q9NUN5 540 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 CCDC39Q9UFE4 941 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 LIMD1Q9UGP4 676 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 LTBP3Q9NS15 1303 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 NRXN2Q9P2S2 1712 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 SBF1O95248 1867 aa9.28□□□□□ -0.92
CCDC60-204ENST00000539847 H0YIN7 160 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 RNMTO43148 476 aaKnown RBP9.27□□□□□ -0.93
CCDC60-204ENST00000539847 STARD3NLO95772 234 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 MBD3O95983 291 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 SERPINB2P05120 415 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 MCM2P49736 904 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 RIPK4P57078 832 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 UVSSAQ2YD98 709 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 NUDT18Q6ZVK8 323 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 BRIP1Q9BX63 1249 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 BCL2L13Q9BXK5 485 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 TEX13AQ9BXU3 409 aaPredicted RBP9.27□□□□□ -0.93
CCDC60-204ENST00000539847 ZKSCAN5Q9Y2L8 839 aa9.27□□□□□ -0.93
CCDC60-204ENST00000539847 EPB41L2O43491 1005 aaKnown RBP9.26□□□□□ -0.93
CCDC60-204ENST00000539847 PDE6BP35913 854 aa9.26□□□□□ -0.93
CCDC60-204ENST00000539847 EIF5P55010 431 aaKnown RBP9.26□□□□□ -0.93
CCDC60-204ENST00000539847 DIXDC1Q155Q3 683 aa9.26□□□□□ -0.93
CCDC60-204ENST00000539847 SOGA3Q5TF21 947 aa9.26□□□□□ -0.93
CCDC60-204ENST00000539847 TMCO4Q5TGY1 634 aa9.26□□□□□ -0.93
CCDC60-204ENST00000539847 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
CCDC60-204ENST00000539847 IL17RAQ96F46 866 aa9.26□□□□□ -0.93
CCDC60-204ENST00000539847 USP26Q9BXU7 913 aa9.26□□□□□ -0.93
CCDC60-204ENST00000539847 API5Q9BZZ5 524 aaKnown RBP9.26□□□□□ -0.93
CCDC60-204ENST00000539847 SCN11AQ9UI33 1791 aa9.26□□□□□ -0.93
CCDC60-204ENST00000539847 PPP1R3GB7ZBB8 358 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 NFKBIEO00221 500 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 CD46P15529 392 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 PTPREP23469 700 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 HTRA3P83110 453 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 RASSF7Q02833 373 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 IRF5Q13568 498 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 ZSCAN23Q3MJ62 389 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 ANKRD45Q5TZF3 282 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 PPP2R2DQ66LE6 453 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 SASS6Q6UVJ0 657 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 LRSAM1Q6UWE0 723 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 C2CD5Q86YS7 1000 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 RGS22Q8NE09 1264 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 GAS2L2Q8NHY3 880 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 LNPKQ9C0E8 428 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 DCTPP1Q9H773 170 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 SCUBE2Q9NQ36 999 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 ZBTB1Q9Y2K1 713 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 COL3A1P02461 1466 aaPredicted RBP9.25□□□□□ -0.93
CCDC60-204ENST00000539847 ABCC4O15439 1325 aa9.25□□□□□ -0.93
CCDC60-204ENST00000539847 CARMIL3Q8ND23 1372 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 DLEC1Q9Y238 1755 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 ST18O60284 1047 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 DIAPH1O60610 1272 aaKnown RBP9.24□□□□□ -0.93
CCDC60-204ENST00000539847 VAMP4O75379 141 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 ZNF853P0CG23 659 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 GNAI1P63096 354 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 UTP14CQ5TAP6 766 aaKnown RBP9.24□□□□□ -0.93
CCDC60-204ENST00000539847 INTS3Q68E01 1043 aaKnown RBP9.24□□□□□ -0.93
CCDC60-204ENST00000539847 CASC1Q6TDU7 716 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 RIC3Q7Z5B4 369 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 RPAP2Q8IXW5 612 aaPredicted RBP9.24□□□□□ -0.93
CCDC60-204ENST00000539847 FAM184AQ8NB25 1140 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 TATDN2Q93075 761 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 LGR6Q9HBX8 967 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 IFT57Q9NWB7 429 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
CCDC60-204ENST00000539847 POTECB2RU33 542 aa9.23□□□□□ -0.93
CCDC60-204ENST00000539847 SMAPO00193 183 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms