RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 GYG1P46976 350 aa16.1■□□□□ 0.17
CCDC42-202ENST00000539522 TIMM10P62072 90 aa16.1■□□□□ 0.17
CCDC42-202ENST00000539522 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
CCDC42-202ENST00000539522 AAMPQ13685 434 aa16.1■□□□□ 0.17
CCDC42-202ENST00000539522 SUPT20HQ8NEM7 779 aa16.1■□□□□ 0.17
CCDC42-202ENST00000539522 FAM84BQ96KN1 310 aaPredicted RBP16.1■□□□□ 0.17
CCDC42-202ENST00000539522 VPS33BQ9H267 617 aa16.1■□□□□ 0.17
CCDC42-202ENST00000539522 DBNDD1Q9H9R9 158 aa16.1■□□□□ 0.17
CCDC42-202ENST00000539522 PUM3Q15397 648 aaKnown RBP16.09■□□□□ 0.17
CCDC42-202ENST00000539522 FBXO33Q7Z6M2 555 aa16.09■□□□□ 0.17
CCDC42-202ENST00000539522 LARGE2Q8N3Y3 721 aa16.09■□□□□ 0.17
CCDC42-202ENST00000539522 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
CCDC42-202ENST00000539522 EAF2Q96CJ1 260 aaPredicted RBP16.09■□□□□ 0.17
CCDC42-202ENST00000539522 TLR7Q9NYK1 1049 aaKnown RBP16.09■□□□□ 0.17
CCDC42-202ENST00000539522 CEP126Q9P2H0 1117 aa16.09■□□□□ 0.17
CCDC42-202ENST00000539522 AKAP11Q9UKA4 1901 aa16.09■□□□□ 0.17
CCDC42-202ENST00000539522 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.16
CCDC42-202ENST00000539522 A0A1B0GUL7 405 aa16.08■□□□□ 0.16
CCDC42-202ENST00000539522 SMARCA5O60264 1052 aaPredicted RBP16.08■□□□□ 0.16
CCDC42-202ENST00000539522 HMMRO75330 724 aa16.08■□□□□ 0.16
CCDC42-202ENST00000539522 ATP2B3Q16720 1220 aa16.08■□□□□ 0.16
CCDC42-202ENST00000539522 TNNI3KQ59H18 835 aa16.08■□□□□ 0.16
CCDC42-202ENST00000539522 TMX4Q9H1E5 349 aaPredicted RBP16.08■□□□□ 0.16
CCDC42-202ENST00000539522 FPGT-TNNI3KV9GXZ4 949 aa16.08■□□□□ 0.16
CCDC42-202ENST00000539522 APBB1O00213 710 aa16.07■□□□□ 0.16
CCDC42-202ENST00000539522 ECE2O60344 883 aa16.07■□□□□ 0.16
CCDC42-202ENST00000539522 BCAMP50895 628 aa16.07■□□□□ 0.16
CCDC42-202ENST00000539522 LPIN2Q92539 896 aa16.07■□□□□ 0.16
CCDC42-202ENST00000539522 EYA3Q99504 573 aa16.07■□□□□ 0.16
CCDC42-202ENST00000539522 ZC3H12CQ9C0D7 883 aaKnown RBP16.07■□□□□ 0.16
CCDC42-202ENST00000539522 IL1RAPL2Q9NP60 686 aa16.07■□□□□ 0.16
CCDC42-202ENST00000539522 GPR108Q9NPR9 543 aa16.07■□□□□ 0.16
CCDC42-202ENST00000539522 IL1R1P14778 569 aa16.06■□□□□ 0.16
CCDC42-202ENST00000539522 CXCL9Q07325 125 aa16.06■□□□□ 0.16
CCDC42-202ENST00000539522 SMC5Q8IY18 1101 aa16.06■□□□□ 0.16
CCDC42-202ENST00000539522 XAGE2Q96GT9 111 aa16.06■□□□□ 0.16
CCDC42-202ENST00000539522 CD209Q9NNX6 404 aa16.06■□□□□ 0.16
CCDC42-202ENST00000539522 DBNLQ9UJU6 430 aaKnown RBP16.06■□□□□ 0.16
CCDC42-202ENST00000539522 ZNRF3Q9ULT6 936 aa16.06■□□□□ 0.16
CCDC42-202ENST00000539522 WDR90Q96KV7 1748 aa16.05■□□□□ 0.16
CCDC42-202ENST00000539522 PHKA1P46020 1223 aa16.05■□□□□ 0.16
CCDC42-202ENST00000539522 KCNJ4P48050 445 aa16.05■□□□□ 0.16
CCDC42-202ENST00000539522 TDRD7Q8NHU6 1098 aaKnown RBP16.05■□□□□ 0.16
CCDC42-202ENST00000539522 DBNDD2Q9BQY9 259 aa16.05■□□□□ 0.16
CCDC42-202ENST00000539522 MXD3Q9BW11 206 aa16.05■□□□□ 0.16
CCDC42-202ENST00000539522 MYO5AQ9Y4I1 1855 aaKnown RBP16.04■□□□□ 0.16
CCDC42-202ENST00000539522 DCAF8L1A6NGE4 600 aa16.04■□□□□ 0.16
CCDC42-202ENST00000539522 POTECB2RU33 542 aa16.04■□□□□ 0.16
CCDC42-202ENST00000539522 RAB11FIP3O75154 756 aa16.04■□□□□ 0.16
CCDC42-202ENST00000539522 OS9Q13438 667 aaPredicted RBP16.04■□□□□ 0.16
CCDC42-202ENST00000539522 SCARF1Q14162 830 aa16.04■□□□□ 0.16
CCDC42-202ENST00000539522 NIM1KQ8IY84 436 aa16.04■□□□□ 0.16
CCDC42-202ENST00000539522 KIF1BPQ96EK5 621 aa16.04■□□□□ 0.16
CCDC42-202ENST00000539522 COA1Q9GZY4 146 aa16.04■□□□□ 0.16
CCDC42-202ENST00000539522 CCDC8Q9H0W5 538 aaPredicted RBP16.04■□□□□ 0.16
CCDC42-202ENST00000539522 ADAMTSL1Q8N6G6 1762 aa16.04■□□□□ 0.16
CCDC42-202ENST00000539522 KDM2BQ8NHM5 1336 aa16.03■□□□□ 0.16
CCDC42-202ENST00000539522 SALL3Q9BXA9 1300 aa16.03■□□□□ 0.16
CCDC42-202ENST00000539522 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
CCDC42-202ENST00000539522 RAD17O75943 681 aa16.03■□□□□ 0.16
CCDC42-202ENST00000539522 SLC5A1P13866 664 aa16.03■□□□□ 0.16
CCDC42-202ENST00000539522 CCDC102BQ68D86 513 aa16.03■□□□□ 0.16
CCDC42-202ENST00000539522 C16orf71Q8IYS4 520 aaPredicted RBP16.03■□□□□ 0.16
CCDC42-202ENST00000539522 OTUD7AQ8TE49 926 aaPredicted RBP16.03■□□□□ 0.16
CCDC42-202ENST00000539522 IQSEC3Q9UPP2 1182 aaPredicted RBP16.03■□□□□ 0.16
CCDC42-202ENST00000539522 SHTN1A0MZ66 631 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 PSMD14O00487 310 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 DDNO94850 711 aaPredicted RBP16.02■□□□□ 0.16
CCDC42-202ENST00000539522 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
CCDC42-202ENST00000539522 HIBADHP31937 336 aaKnown RBP16.02■□□□□ 0.16
CCDC42-202ENST00000539522 GRIK5Q16478 980 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 HSP90AB4PQ58FF6 505 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 DACT2Q5SW24 774 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 PODNQ7Z5L7 613 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 ERC1Q8IUD2 1116 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 CERS5Q8N5B7 392 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 JAG2Q9Y219 1238 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 AKAP2Q9Y2D5 859 aa16.02■□□□□ 0.16
CCDC42-202ENST00000539522 ZBTB22O15209 634 aa16.01■□□□□ 0.15
CCDC42-202ENST00000539522 PI16Q6UXB8 463 aa16.01■□□□□ 0.15
CCDC42-202ENST00000539522 AACSQ86V21 672 aa16.01■□□□□ 0.15
CCDC42-202ENST00000539522 JDP2Q8WYK2 163 aa16.01■□□□□ 0.15
CCDC42-202ENST00000539522 NEUROD6Q96NK8 337 aa16.01■□□□□ 0.15
CCDC42-202ENST00000539522 GMLQ99445 158 aa16.01■□□□□ 0.15
CCDC42-202ENST00000539522 LRRCC1Q9C099 1032 aa16.01■□□□□ 0.15
CCDC42-202ENST00000539522 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
CCDC42-202ENST00000539522 FAM205AQ6ZU69 1335 aa16■□□□□ 0.15
CCDC42-202ENST00000539522 GLTPD2A6NH11 291 aa16■□□□□ 0.15
CCDC42-202ENST00000539522 VIL1P09327 827 aaKnown RBP16■□□□□ 0.15
CCDC42-202ENST00000539522 SCNN1DP51172 638 aa16■□□□□ 0.15
CCDC42-202ENST00000539522 RASGRF1Q13972 1273 aa16■□□□□ 0.15
CCDC42-202ENST00000539522 ZNF804AQ7Z570 1209 aa16■□□□□ 0.15
CCDC42-202ENST00000539522 GCC1Q96CN9 775 aa16■□□□□ 0.15
CCDC42-202ENST00000539522 RWDD1Q9H446 243 aaPredicted RBP16■□□□□ 0.15
CCDC42-202ENST00000539522 DOCK2Q92608 1830 aa15.99■□□□□ 0.15
CCDC42-202ENST00000539522 ARID4AP29374 1257 aaPredicted RBP15.99■□□□□ 0.15
CCDC42-202ENST00000539522 MCAMP43121 646 aa15.99■□□□□ 0.15
CCDC42-202ENST00000539522 GTF2IP78347 998 aa15.99■□□□□ 0.15
CCDC42-202ENST00000539522 B4GALNT3Q6L9W6 998 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms