RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 FRAT2O75474 233 aaPredicted RBP12.5□□□□□ -0.41
CLPB-210ENST00000539148 GPSM2P81274 684 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 WASHC4Q2M389 1173 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 HELBQ8NG08 1087 aaPredicted RBP12.5□□□□□ -0.41
CLPB-210ENST00000539148 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 RTFDC1Q9BY42 306 aaPredicted RBP12.5□□□□□ -0.41
CLPB-210ENST00000539148 LNPKQ9C0E8 428 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 TAOK3Q9H2K8 898 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 AOX1Q06278 1338 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 MED23Q9ULK4 1368 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 ZNF609O15014 1411 aa12.5□□□□□ -0.41
CLPB-210ENST00000539148 AK9Q5TCS8 1911 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 LTBP1Q14766 1721 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 LTBP3Q9NS15 1303 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 IGSF3O75054 1194 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 TAF5LO75529 589 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 MX1P20591 662 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 FKBP4Q02790 459 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLPB-210ENST00000539148 LRRFIP1Q32MZ4 808 aaKnown RBP12.49□□□□□ -0.41
CLPB-210ENST00000539148 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 NLGN2Q8NFZ4 835 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 TBC1D16Q8TBP0 767 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 BCL11AQ9H165 835 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 ECHDC1Q9NTX5 307 aa12.49□□□□□ -0.41
CLPB-210ENST00000539148 CCDC88AQ3V6T2 1871 aa12.48□□□□□ -0.41
CLPB-210ENST00000539148 GLRX3O76003 335 aaKnown RBP12.48□□□□□ -0.41
CLPB-210ENST00000539148 FGFR2P21802 821 aa12.48□□□□□ -0.41
CLPB-210ENST00000539148 HIBADHP31937 336 aaKnown RBP12.48□□□□□ -0.41
CLPB-210ENST00000539148 GPR162Q16538 588 aa12.48□□□□□ -0.41
CLPB-210ENST00000539148 JDP2Q8WYK2 163 aa12.48□□□□□ -0.41
CLPB-210ENST00000539148 XAGE2Q96GT9 111 aa12.48□□□□□ -0.41
CLPB-210ENST00000539148 ZNF512BQ96KM6 892 aaPredicted RBP12.48□□□□□ -0.41
CLPB-210ENST00000539148 COA1Q9GZY4 146 aa12.48□□□□□ -0.41
CLPB-210ENST00000539148 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
CLPB-210ENST00000539148 DICER1Q9UPY3 1922 aaKnown RBP12.48□□□□□ -0.41
CLPB-210ENST00000539148 ZBTB22O15209 634 aa12.47□□□□□ -0.41
CLPB-210ENST00000539148 TIMM10P62072 90 aa12.47□□□□□ -0.41
CLPB-210ENST00000539148 TICAM2Q86XR7 235 aa12.47□□□□□ -0.41
CLPB-210ENST00000539148 ZGPATQ8N5A5 531 aaKnown RBP12.47□□□□□ -0.41
CLPB-210ENST00000539148 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLPB-210ENST00000539148 EAF2Q96CJ1 260 aaPredicted RBP12.47□□□□□ -0.41
CLPB-210ENST00000539148 CCDC8Q9H0W5 538 aaPredicted RBP12.47□□□□□ -0.41
CLPB-210ENST00000539148 DUOX1Q9NRD9 1551 aa12.47□□□□□ -0.41
CLPB-210ENST00000539148 PPIP5K2O43314 1243 aa12.46□□□□□ -0.41
CLPB-210ENST00000539148 SMARCA5O60264 1052 aaPredicted RBP12.46□□□□□ -0.41
CLPB-210ENST00000539148 EIF5BO60841 1220 aaKnown RBP12.46□□□□□ -0.41
CLPB-210ENST00000539148 ANP32AP39687 249 aaKnown RBP12.46□□□□□ -0.41
CLPB-210ENST00000539148 KIAA2012Q0VF49 1180 aa12.46□□□□□ -0.41
CLPB-210ENST00000539148 TTF1Q15361 905 aaPredicted RBP12.46□□□□□ -0.41
CLPB-210ENST00000539148 TMED8Q6PL24 325 aaPredicted RBP12.46□□□□□ -0.41
CLPB-210ENST00000539148 ARHGAP27Q6ZUM4 889 aa12.46□□□□□ -0.41
CLPB-210ENST00000539148 PODNQ7Z5L7 613 aa12.46□□□□□ -0.41
CLPB-210ENST00000539148 LARGE2Q8N3Y3 721 aa12.46□□□□□ -0.41
CLPB-210ENST00000539148 OSBPL3Q9H4L5 887 aa12.46□□□□□ -0.41
CLPB-210ENST00000539148 STAP2Q9UGK3 403 aa12.46□□□□□ -0.41
CLPB-210ENST00000539148 DENND2AQ9ULE3 1009 aa12.46□□□□□ -0.41
CLPB-210ENST00000539148 COL4A1P02462 1669 aa12.45□□□□□ -0.42
CLPB-210ENST00000539148 PDS5AQ29RF7 1337 aaKnown RBP12.45□□□□□ -0.42
CLPB-210ENST00000539148 GOLGB1Q14789 3259 aaKnown RBP12.45□□□□□ -0.42
CLPB-210ENST00000539148 ATP5JP18859 108 aa12.45□□□□□ -0.42
CLPB-210ENST00000539148 NIM1KQ8IY84 436 aa12.45□□□□□ -0.42
CLPB-210ENST00000539148 TBC1D22AQ8WUA7 517 aa12.45□□□□□ -0.42
CLPB-210ENST00000539148 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
CLPB-210ENST00000539148 DBNLQ9UJU6 430 aaKnown RBP12.45□□□□□ -0.42
CLPB-210ENST00000539148 SBF1O95248 1867 aa12.44□□□□□ -0.42
CLPB-210ENST00000539148 LMNB1P20700 586 aa12.44□□□□□ -0.42
CLPB-210ENST00000539148 ARID4AP29374 1257 aaPredicted RBP12.44□□□□□ -0.42
CLPB-210ENST00000539148 IARSP41252 1262 aaKnown RBP12.44□□□□□ -0.42
CLPB-210ENST00000539148 PDE1AP54750 535 aa12.44□□□□□ -0.42
CLPB-210ENST00000539148 SPTY2D1Q68D10 685 aaPredicted RBP12.44□□□□□ -0.42
CLPB-210ENST00000539148 CCDC102BQ68D86 513 aa12.44□□□□□ -0.42
CLPB-210ENST00000539148 FBXO33Q7Z6M2 555 aa12.44□□□□□ -0.42
CLPB-210ENST00000539148 WDR66Q8TBY9 1149 aa12.44□□□□□ -0.42
CLPB-210ENST00000539148 DBNDD2Q9BQY9 259 aa12.44□□□□□ -0.42
CLPB-210ENST00000539148 PSME4Q14997 1843 aa12.44□□□□□ -0.42
CLPB-210ENST00000539148 MYH7P12883 1935 aa12.43□□□□□ -0.42
CLPB-210ENST00000539148 RIMBP2O15034 1052 aa12.43□□□□□ -0.42
CLPB-210ENST00000539148 GYG1P46976 350 aa12.43□□□□□ -0.42
CLPB-210ENST00000539148 MMP14P50281 582 aa12.43□□□□□ -0.42
CLPB-210ENST00000539148 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
CLPB-210ENST00000539148 CASC1Q6TDU7 716 aa12.43□□□□□ -0.42
CLPB-210ENST00000539148 PLEKHM2Q8IWE5 1019 aa12.43□□□□□ -0.42
CLPB-210ENST00000539148 CNTROBQ8N137 903 aa12.43□□□□□ -0.42
CLPB-210ENST00000539148 FAM84BQ96KN1 310 aaPredicted RBP12.43□□□□□ -0.42
CLPB-210ENST00000539148 MYO3BQ8WXR4 1341 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 HIP1O00291 1037 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 IL1R1P14778 569 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 RGS3P49796 1198 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 BCAMP50895 628 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 TNIP1Q15025 636 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 SPATA5Q8NB90 893 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 TDRD7Q8NHU6 1098 aaKnown RBP12.42□□□□□ -0.42
CLPB-210ENST00000539148 BACH2Q9BYV9 841 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.42□□□□□ -0.42
CLPB-210ENST00000539148 CD209Q9NNX6 404 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 WWC3Q9ULE0 1092 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 ZNRF3Q9ULT6 936 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 AKAP11Q9UKA4 1901 aa12.42□□□□□ -0.42
CLPB-210ENST00000539148 MAST3O60307 1309 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms