RNA–Protein interactions for RNA: ENST00000539019.1

SSPN-206, Transcript of sarcospan, humanhuman

TSL 1 (best)

Gene SSPN, Length 1,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-206ENST00000539019 MTMR7Q9Y216 660 aa8.93□□□□□ -0.98
SSPN-206ENST00000539019 DYRK3O43781 588 aa8.92□□□□□ -0.98
SSPN-206ENST00000539019 SMNDC1O75940 238 aaKnown RBP eCLIP8.92□□□□□ -0.98
SSPN-206ENST00000539019 FAM13AO94988 1023 aa8.92□□□□□ -0.98
SSPN-206ENST00000539019 ABL1P00519 1130 aa8.92□□□□□ -0.98
SSPN-206ENST00000539019 IREB2P48200 963 aaKnown RBP8.92□□□□□ -0.98
SSPN-206ENST00000539019 FKBP4Q02790 459 aaKnown RBP eCLIP8.92□□□□□ -0.98
SSPN-206ENST00000539019 PBX4Q9BYU1 374 aa8.92□□□□□ -0.98
SSPN-206ENST00000539019 SALL4Q9UJQ4 1053 aa8.92□□□□□ -0.98
SSPN-206ENST00000539019 USTQ9Y2C2 406 aa8.92□□□□□ -0.98
SSPN-206ENST00000539019 PPME1Q9Y570 386 aa8.92□□□□□ -0.98
SSPN-206ENST00000539019 LINC01387J3KSC0 135 aa8.91□□□□□ -0.98
SSPN-206ENST00000539019 NOS3P29474 1203 aa8.91□□□□□ -0.98
SSPN-206ENST00000539019 ERICH6Q7L0X2 663 aa8.91□□□□□ -0.98
SSPN-206ENST00000539019 TP53INP1Q96A56 240 aa8.91□□□□□ -0.98
SSPN-206ENST00000539019 SSBP4Q9BWG4 385 aaPredicted RBP8.91□□□□□ -0.98
SSPN-206ENST00000539019 CES1P23141 567 aa8.9□□□□□ -0.98
SSPN-206ENST00000539019 CDC27P30260 824 aa8.9□□□□□ -0.98
SSPN-206ENST00000539019 ZNF211Q13398 564 aaPredicted RBP8.9□□□□□ -0.98
SSPN-206ENST00000539019 SF3B2Q13435 895 aaKnown RBP8.9□□□□□ -0.98
SSPN-206ENST00000539019 POP1Q99575 1024 aaKnown RBP8.9□□□□□ -0.98
SSPN-206ENST00000539019 MUC3BQ9H195 1237 aa8.9□□□□□ -0.98
SSPN-206ENST00000539019 SRA1Q9HD15 236 aaKnown RBP8.9□□□□□ -0.98
SSPN-206ENST00000539019 PDS5BQ9NTI5 1447 aa8.89□□□□□ -0.99
SSPN-206ENST00000539019 FZD6O60353 706 aa8.89□□□□□ -0.99
SSPN-206ENST00000539019 MAP4K3Q8IVH8 894 aa8.89□□□□□ -0.99
SSPN-206ENST00000539019 CHRDQ9H2X0 955 aa8.89□□□□□ -0.99
SSPN-206ENST00000539019 ALX3O95076 343 aa8.88□□□□□ -0.99
SSPN-206ENST00000539019 ACPPP15309 386 aa8.88□□□□□ -0.99
SSPN-206ENST00000539019 CDC25BP30305 580 aa8.88□□□□□ -0.99
SSPN-206ENST00000539019 TXNDC11Q6PKC3 985 aa8.88□□□□□ -0.99
SSPN-206ENST00000539019 GALNT11Q8NCW6 608 aa8.88□□□□□ -0.99
SSPN-206ENST00000539019 MRPL18Q9H0U6 180 aaKnown RBP8.88□□□□□ -0.99
SSPN-206ENST00000539019 SH2B1Q9NRF2 756 aaPredicted RBP8.88□□□□□ -0.99
SSPN-206ENST00000539019 CCDC87Q9NVE4 849 aa8.88□□□□□ -0.99
SSPN-206ENST00000539019 FANCD2Q9BXW9 1451 aa8.88□□□□□ -0.99
SSPN-206ENST00000539019 H2AFB1P0C5Y9 115 aa8.87□□□□□ -0.99
SSPN-206ENST00000539019 H2AFB2P0C5Z0 115 aa8.87□□□□□ -0.99
SSPN-206ENST00000539019 TMEM130Q8N3G9 435 aa8.87□□□□□ -0.99
SSPN-206ENST00000539019 PMEPA1Q969W9 287 aa8.87□□□□□ -0.99
SSPN-206ENST00000539019 NFKBIEO00221 500 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 TRPA1O75762 1119 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 MEGF10Q96KG7 1140 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 AKTIPQ9H8T0 292 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 DZANK1Q9NVP4 752 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 F8W735 103 aaPredicted RBP8.86□□□□□ -0.99
SSPN-206ENST00000539019 TNFRSF21O75509 655 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 PTPRAP18433 802 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 EPHA1P21709 976 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 PRSS36Q5K4E3 855 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 ADAM19Q9H013 955 aa8.86□□□□□ -0.99
SSPN-206ENST00000539019 TM4SF5O14894 197 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 EREGO14944 169 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 ICMTO60725 284 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 USP5P45974 858 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 EHHADHQ08426 723 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 B4GALNT3Q6L9W6 998 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 DCAF11Q8TEB1 546 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 HHIPQ96QV1 700 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 CARD10Q9BWT7 1032 aa8.85□□□□□ -0.99
SSPN-206ENST00000539019 FOXD3Q9UJU5 478 aaPredicted RBP8.85□□□□□ -0.99
SSPN-206ENST00000539019 URB2Q14146 1524 aaKnown RBP8.85□□□□□ -0.99
SSPN-206ENST00000539019 THOC2Q8NI27 1593 aaKnown RBP8.84□□□□□ -0.99
SSPN-206ENST00000539019 FSCN2O14926 492 aa8.84□□□□□ -0.99
SSPN-206ENST00000539019 PHACTR2O75167 634 aa8.84□□□□□ -0.99
SSPN-206ENST00000539019 CD68P34810 354 aaPredicted RBP8.84□□□□□ -0.99
SSPN-206ENST00000539019 SERPINB4P48594 390 aa8.84□□□□□ -0.99
SSPN-206ENST00000539019 AGGF1Q8N302 714 aaeCLIP8.84□□□□□ -0.99
SSPN-206ENST00000539019 KCNK4Q9NYG8 393 aa8.84□□□□□ -0.99
SSPN-206ENST00000539019 EGFL7Q9UHF1 273 aa8.84□□□□□ -0.99
SSPN-206ENST00000539019 TIMELESSQ9UNS1 1208 aa8.84□□□□□ -0.99
SSPN-206ENST00000539019 PDE2AO00408 941 aaPredicted RBP8.83□□□□□ -1
SSPN-206ENST00000539019 ECM1Q16610 540 aa8.83□□□□□ -1
SSPN-206ENST00000539019 FOXD4L6Q3SYB3 417 aaPredicted RBP8.83□□□□□ -1
SSPN-206ENST00000539019 ZMYM1Q5SVZ6 1142 aa8.83□□□□□ -1
SSPN-206ENST00000539019 FAM117BQ6P1L5 589 aa8.83□□□□□ -1
SSPN-206ENST00000539019 FOXD4L3Q6VB84 417 aaPredicted RBP8.83□□□□□ -1
SSPN-206ENST00000539019 DZIP1LQ8IYY4 767 aaKnown RBP8.83□□□□□ -1
SSPN-206ENST00000539019 GJD3Q8N144 294 aa8.83□□□□□ -1
SSPN-206ENST00000539019 Q8N3U1 123 aa8.83□□□□□ -1
SSPN-206ENST00000539019 RETREG2Q8NC44 543 aa8.83□□□□□ -1
SSPN-206ENST00000539019 FAM177BA6PVY3 158 aa8.82□□□□□ -1
SSPN-206ENST00000539019 WISP1O95388 367 aa8.82□□□□□ -1
SSPN-206ENST00000539019 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.82□□□□□ -1
SSPN-206ENST00000539019 KLHL23Q8NBE8 558 aa8.82□□□□□ -1
SSPN-206ENST00000539019 SNX29Q8TEQ0 813 aa8.82□□□□□ -1
SSPN-206ENST00000539019 OSMRQ99650 979 aa8.82□□□□□ -1
SSPN-206ENST00000539019 MRC2Q9UBG0 1479 aa8.82□□□□□ -1
SSPN-206ENST00000539019 WDR62O43379 1518 aa8.81□□□□□ -1
SSPN-206ENST00000539019 XP32Q5T750 250 aa8.81□□□□□ -1
SSPN-206ENST00000539019 TMEM102Q8N9M5 508 aaPredicted RBP8.81□□□□□ -1
SSPN-206ENST00000539019 NXPE3Q969Y0 559 aa8.81□□□□□ -1
SSPN-206ENST00000539019 KLHDC7BQ96G42 594 aa8.81□□□□□ -1
SSPN-206ENST00000539019 CEP164Q9UPV0 1460 aa8.81□□□□□ -1
SSPN-206ENST00000539019 KIF21AQ7Z4S6 1674 aa8.81□□□□□ -1
SSPN-206ENST00000539019 ERCC6Q03468 1493 aa8.8□□□□□ -1
SSPN-206ENST00000539019 H3BRB1 525 aa8.8□□□□□ -1
SSPN-206ENST00000539019 DDX3YO15523 660 aaKnown RBP8.8□□□□□ -1
SSPN-206ENST00000539019 GLYCTKQ8IVS8 523 aa8.8□□□□□ -1
SSPN-206ENST00000539019 ZKSCAN3Q9BRR0 538 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms