RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 BCS1LQ9Y276 419 aa17.3■□□□□ 0.36
CD4-208ENST00000538827 SLX4Q8IY92 1834 aa17.3■□□□□ 0.36
CD4-208ENST00000538827 MYH13Q9UKX3 1938 aa17.29■□□□□ 0.36
CD4-208ENST00000538827 TTC41PQ6P2S7 1318 aa17.29■□□□□ 0.36
CD4-208ENST00000538827 ADORA1P30542 326 aa17.29■□□□□ 0.36
CD4-208ENST00000538827 TIMM10P62072 90 aa17.29■□□□□ 0.36
CD4-208ENST00000538827 STYK1Q6J9G0 422 aa17.29■□□□□ 0.36
CD4-208ENST00000538827 SMC1BQ8NDV3 1235 aa17.29■□□□□ 0.36
CD4-208ENST00000538827 ANKRD2Q9GZV1 360 aa17.29■□□□□ 0.36
CD4-208ENST00000538827 ERC2O15083 957 aa17.28■□□□□ 0.36
CD4-208ENST00000538827 ALDH1B1P30837 517 aa17.28■□□□□ 0.36
CD4-208ENST00000538827 STAP2Q9UGK3 403 aa17.28■□□□□ 0.36
CD4-208ENST00000538827 SNAP23O00161 211 aa17.27■□□□□ 0.36
CD4-208ENST00000538827 BBOX1O75936 387 aa17.27■□□□□ 0.36
CD4-208ENST00000538827 IFIT1P09914 478 aaKnown RBP17.27■□□□□ 0.36
CD4-208ENST00000538827 GSPT1P15170 499 aaKnown RBP17.27■□□□□ 0.36
CD4-208ENST00000538827 TTC39AQ5SRH9 613 aa17.27■□□□□ 0.36
CD4-208ENST00000538827 C9orf131Q5VYM1 1079 aa17.27■□□□□ 0.36
CD4-208ENST00000538827 TMC4Q7Z404 712 aa17.27■□□□□ 0.36
CD4-208ENST00000538827 LPIN2Q92539 896 aa17.27■□□□□ 0.36
CD4-208ENST00000538827 XAGE2Q96GT9 111 aa17.27■□□□□ 0.36
CD4-208ENST00000538827 TMX4Q9H1E5 349 aaPredicted RBP17.27■□□□□ 0.36
CD4-208ENST00000538827 ANKIB1Q9P2G1 1089 aa17.27■□□□□ 0.36
CD4-208ENST00000538827 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
CD4-208ENST00000538827 LTBP1Q14766 1721 aa17.27■□□□□ 0.35
CD4-208ENST00000538827 TRIM6-TRIM34B2RNG4 842 aa17.26■□□□□ 0.35
CD4-208ENST00000538827 GLRX3O76003 335 aaKnown RBP17.26■□□□□ 0.35
CD4-208ENST00000538827 MAP4K4O95819 1239 aaPredicted RBP17.26■□□□□ 0.35
CD4-208ENST00000538827 DPEP1P16444 411 aa17.26■□□□□ 0.35
CD4-208ENST00000538827 FGFR2P21802 821 aa17.26■□□□□ 0.35
CD4-208ENST00000538827 BMP2KLQ5H9B9 411 aa17.26■□□□□ 0.35
CD4-208ENST00000538827 PRPF40BQ6NWY9 871 aaKnown RBP17.26■□□□□ 0.35
CD4-208ENST00000538827 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
CD4-208ENST00000538827 CNKSR1Q969H4 720 aa17.26■□□□□ 0.35
CD4-208ENST00000538827 OSBPL3Q9H4L5 887 aa17.26■□□□□ 0.35
CD4-208ENST00000538827 BRCA1P38398 1863 aaKnown RBP17.26■□□□□ 0.35
CD4-208ENST00000538827 XDHP47989 1333 aa17.25■□□□□ 0.35
CD4-208ENST00000538827 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
CD4-208ENST00000538827 GPSM2P81274 684 aa17.25■□□□□ 0.35
CD4-208ENST00000538827 CCDC158Q5M9N0 1113 aa17.25■□□□□ 0.35
CD4-208ENST00000538827 UFL1O94874 794 aa17.24■□□□□ 0.35
CD4-208ENST00000538827 UBE4AQ14139 1066 aa17.24■□□□□ 0.35
CD4-208ENST00000538827 RILPL2Q969X0 211 aa17.24■□□□□ 0.35
CD4-208ENST00000538827 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
CD4-208ENST00000538827 BOLA2Q9H3K6 86 aa17.24■□□□□ 0.35
CD4-208ENST00000538827 RRAGCQ9HB90 399 aa17.24■□□□□ 0.35
CD4-208ENST00000538827 NSFL1CQ9UNZ2 370 aaKnown RBP17.24■□□□□ 0.35
CD4-208ENST00000538827 ATP6V0A2Q9Y487 856 aa17.24■□□□□ 0.35
CD4-208ENST00000538827 ZNF804BA4D1E1 1349 aa17.23■□□□□ 0.35
CD4-208ENST00000538827 SP8Q8IXZ3 490 aa17.23■□□□□ 0.35
CD4-208ENST00000538827 GGA1Q9UJY5 639 aa17.23■□□□□ 0.35
CD4-208ENST00000538827 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
CD4-208ENST00000538827 ATP5JP18859 108 aa17.22■□□□□ 0.35
CD4-208ENST00000538827 ATP2B4P23634 1241 aa17.22■□□□□ 0.35
CD4-208ENST00000538827 PHKA1P46020 1223 aa17.22■□□□□ 0.35
CD4-208ENST00000538827 OLFM4Q6UX06 510 aa17.22■□□□□ 0.35
CD4-208ENST00000538827 GPR101Q96P66 508 aaPredicted RBP17.22■□□□□ 0.35
CD4-208ENST00000538827 AKAP11Q9UKA4 1901 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 WTIPA6NIX2 430 aaPredicted RBP17.21■□□□□ 0.35
CD4-208ENST00000538827 SDSP20132 328 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 KLRK1P26718 216 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 GYG1P46976 350 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 VPS37DQ86XT2 251 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 MPNDQ8N594 471 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 LEMD3Q9Y2U8 911 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 NDUFB9Q9Y6M9 179 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 MYH7P12883 1935 aa17.21■□□□□ 0.35
CD4-208ENST00000538827 C6orf229H3BNL8 230 aa17.2■□□□□ 0.34
CD4-208ENST00000538827 CDC45O75419 566 aa17.2■□□□□ 0.34
CD4-208ENST00000538827 UQCRFS1P1P0C7P4 283 aa17.2■□□□□ 0.34
CD4-208ENST00000538827 CAVIN4Q5BKX8 364 aa17.2■□□□□ 0.34
CD4-208ENST00000538827 DPP8Q6V1X1 898 aaPredicted RBP17.2■□□□□ 0.34
CD4-208ENST00000538827 BCAMP50895 628 aa17.19■□□□□ 0.34
CD4-208ENST00000538827 SNRKQ9NRH2 765 aa17.19■□□□□ 0.34
CD4-208ENST00000538827 C21orf2O43822 256 aa17.18■□□□□ 0.34
CD4-208ENST00000538827 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
CD4-208ENST00000538827 SCARF1Q14162 830 aa17.18■□□□□ 0.34
CD4-208ENST00000538827 TBC1D16Q8TBP0 767 aa17.18■□□□□ 0.34
CD4-208ENST00000538827 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.18■□□□□ 0.34
CD4-208ENST00000538827 EDC3Q96F86 508 aaKnown RBP17.18■□□□□ 0.34
CD4-208ENST00000538827 HAUS7Q99871 368 aa17.18■□□□□ 0.34
CD4-208ENST00000538827 FSD1Q9BTV5 496 aa17.18■□□□□ 0.34
CD4-208ENST00000538827 GNL3LQ9NVN8 582 aaKnown RBP17.18■□□□□ 0.34
CD4-208ENST00000538827 PODXL2Q9NZ53 605 aa17.18■□□□□ 0.34
CD4-208ENST00000538827 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
CD4-208ENST00000538827 PIM2Q9P1W9 311 aa17.18■□□□□ 0.34
CD4-208ENST00000538827 IQSEC3Q9UPP2 1182 aaPredicted RBP17.18■□□□□ 0.34
CD4-208ENST00000538827 MYO5AQ9Y4I1 1855 aaKnown RBP17.18■□□□□ 0.34
CD4-208ENST00000538827 MED23Q9ULK4 1368 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 GOLIM4O00461 696 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 KCNA3P22001 575 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 MCAMP43121 646 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 FKBP4Q02790 459 aaKnown RBP eCLIP17.17■□□□□ 0.34
CD4-208ENST00000538827 C8orf34Q49A92 452 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 CCDC93Q567U6 631 aa17.17■□□□□ 0.34
CD4-208ENST00000538827 PI16Q6UXB8 463 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms