RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-209	ENST00000538654	ETF1	P62495	437 aa	Known RBP	10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	TSGA10IP	Q3SY00	556 aa		10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	CCAR1	Q8IX12	1150 aa	Known RBP	10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	BPIFA3	Q9BQP9	254 aa		10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	RCOR1	Q9UKL0	485 aa		10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	HDAC5	Q9UQL6	1122 aa		10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	FMN2	Q9NZ56	1722 aa		10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	FAM160A1	Q05DH4	1040 aa		10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	ZRSR1	Q15695	479 aa	Known RBP	10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	HOMER1	Q86YM7	354 aa		10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	TMX4	Q9H1E5	349 aa	Predicted RBP	10.48	□□□□□ -0.73
SNHG1-209	ENST00000538654	IFIT2	P09913	472 aa	Known RBP	10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	ZNF396	Q96N95	335 aa	Predicted RBP	10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	UBXN6	Q9BZV1	441 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	PEAK1	Q9H792	1746 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	ADCY9	O60503	1353 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	KDR	P35968	1356 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	OVOS2	A0A0J9YW53	1432 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	IRX3	P78415	501 aa	Predicted RBP	10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	TOB2	Q14106	344 aa	Predicted RBP	10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	OVOS2	Q6IE36	1432 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	KRBA2	Q6ZNG9	492 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	AOPEP	Q8N6M6	819 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	BRF1	Q92994	677 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	PSD3	Q9NYI0	1048 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	DNAI1	Q9UI46	699 aa		10.47	□□□□□ -0.73
SNHG1-209	ENST00000538654	NAA16	Q6N069	864 aa	Predicted RBP	10.46	□□□□□ -0.73
SNHG1-209	ENST00000538654	NBPF11	Q86T75	865 aa		10.46	□□□□□ -0.73
SNHG1-209	ENST00000538654	GOLGA5	Q8TBA6	731 aa		10.46	□□□□□ -0.73
SNHG1-209	ENST00000538654	LLPH	Q9BRT6	129 aa	Known RBP	10.46	□□□□□ -0.73
SNHG1-209	ENST00000538654	MAP3K19	Q56UN5	1328 aa		10.46	□□□□□ -0.73
SNHG1-209	ENST00000538654	POLR3G	O15318	223 aa	Predicted RBP	10.46	□□□□□ -0.74
SNHG1-209	ENST00000538654	DTNB	O60941	627 aa		10.46	□□□□□ -0.74
SNHG1-209	ENST00000538654	HSP90AB2P	Q58FF8	381 aa		10.46	□□□□□ -0.74
SNHG1-209	ENST00000538654	NOM1	Q5C9Z4	860 aa	Known RBP	10.46	□□□□□ -0.74
SNHG1-209	ENST00000538654	FOXO3	O43524	673 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	TADA3	O75528	432 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	TAGLN	Q01995	201 aa	Known RBP	10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	MTX1	Q13505	466 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	ZSCAN26	Q16670	478 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	GOLGA6L1	Q8N7Z2	621 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	NEK11	Q8NG66	645 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	TRERF1	Q96PN7	1200 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	USP31	Q70CQ4	1352 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	NEO1	Q92859	1461 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	JAKMIP3	Q5VZ66	844 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	DPH6	Q7L8W6	267 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	TMC6	Q7Z403	805 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	FCHSD1	Q86WN1	690 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	GPR161	Q8N6U8	529 aa	Known RBP	10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	DDX54	Q8TDD1	881 aa	Known RBP	10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	EXOC4	Q96A65	974 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	YY1AP1	Q9H869	796 aa		10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	NPHP4	O75161	1426 aa	Predicted RBP	10.45	□□□□□ -0.74
SNHG1-209	ENST00000538654	GNAT3	A8MTJ3	354 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	SMC2	O95347	1197 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	OAS2	P29728	719 aa	Known RBP	10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	PSME1	Q06323	249 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	STK3	Q13188	491 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	NMI	Q13287	307 aa	Predicted RBP	10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	ZFYVE27	Q5T4F4	411 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	HDGFL1	Q5TGJ6	251 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	ARMCX5	Q6P1M9	558 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	ENGASE	Q8NFI3	743 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	RBM46	Q8TBY0	533 aa	Known RBP	10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	CHMP4C	Q96CF2	233 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	SPOCK3	Q9BQ16	436 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	RIMS1	Q86UR5	1692 aa	Known RBP	10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	GOLGA6L9	A6NEM1	432 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	ZSCAN12	O43309	604 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	SMC1A	Q14683	1233 aa	Known RBP	10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	CCDC191	Q8NCU4	936 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	XPO4	Q9C0E2	1151 aa	Known RBP	10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	ARFGAP3	Q9NP61	516 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	JCAD	Q9P266	1359 aa		10.44	□□□□□ -0.74
SNHG1-209	ENST00000538654	TAF7	Q15545	349 aa	Predicted RBP	10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	FSIP1	Q8NA03	581 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	FBXO18	Q8NFZ0	1043 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	SMARCE1	Q969G3	411 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	MPHOSPH8	Q99549	860 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	RSPH14	Q9UHP6	348 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	URI1	O94763	535 aa	Predicted RBP	10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	CASQ1	P31415	396 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	IQUB	Q8NA54	791 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	LRRN4CL	Q8ND94	238 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	FAM227B	Q96M60	508 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	SDF4	Q9BRK5	362 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	GOLPH3L	Q9H4A5	285 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	IFNK	Q9P0W0	207 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	FLT4	P35916	1363 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	MED23	Q9ULK4	1368 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	SBNO1	A3KN83	1393 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	MYO1C	O00159	1063 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	CBFA2T2	O43439	604 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	CREB3	O43889	395 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	JAK2	O60674	1132 aa		10.43	□□□□□ -0.74
SNHG1-209	ENST00000538654	TBC1D8	O95759	1140 aa		10.43	□□□□□ -0.74

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