RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 XAGE2Q96GT9 111 aa13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 DBNDD2Q9BQY9 259 aa13□□□□□ -0.33
TNFRSF1A-211ENST00000538363 C10orf71Q711Q0 1435 aa12.99□□□□□ -0.33
TNFRSF1A-211ENST00000538363 TTC22Q5TAA0 569 aa12.99□□□□□ -0.33
TNFRSF1A-211ENST00000538363 COL4A1P02462 1669 aa12.99□□□□□ -0.33
TNFRSF1A-211ENST00000538363 AOX1Q06278 1338 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 KLRG2A4D1S0 409 aaPredicted RBP12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 UQCRFS1P1P0C7P4 283 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 ATP2B4P23634 1241 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 PTGER2P43116 358 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 TSHZ3Q63HK5 1081 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 SP8Q8IXZ3 490 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 CNTROBQ8N137 903 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 TTLL6Q8N841 843 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 DNAJC2Q99543 621 aaKnown RBP12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 BOLA2Q9H3K6 86 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 STAP2Q9UGK3 403 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 GGA1Q9UJY5 639 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 LEMD3Q9Y2U8 911 aa12.98□□□□□ -0.33
TNFRSF1A-211ENST00000538363 BRCA1P38398 1863 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 ZNF804BA4D1E1 1349 aa12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 XDHP47989 1333 aa12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 EIF5BO60841 1220 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 UFL1O94874 794 aa12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 MAP4K4O95819 1239 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 DPEP1P16444 411 aa12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 TGFB2P61812 414 aa12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 DPP8Q6V1X1 898 aaPredicted RBP12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 MPNDQ8N594 471 aa12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 TLR7Q9NYK1 1049 aaKnown RBP12.97□□□□□ -0.33
TNFRSF1A-211ENST00000538363 ADORA1P30542 326 aa12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 FKBP4Q02790 459 aaKnown RBP eCLIP12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 BMP2KLQ5H9B9 411 aa12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 EYA3Q99504 573 aa12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 SGIP1Q9BQI5 828 aa12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 OSBPL3Q9H4L5 887 aa12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 PIM2Q9P1W9 311 aa12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 DBNLQ9UJU6 430 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 ATP6V0A2Q9Y487 856 aa12.96□□□□□ -0.33
TNFRSF1A-211ENST00000538363 ATP5JP18859 108 aa12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 GPSM2P81274 684 aa12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 LRRFIP1Q32MZ4 808 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 CC2D2BQ6DHV5 1058 aa12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 PRPF40BQ6NWY9 871 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 ZNF804AQ7Z570 1209 aa12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 FSD1Q9BTV5 496 aa12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 ZC3H12CQ9C0D7 883 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 UPF2Q9HAU5 1272 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 WWC3Q9ULE0 1092 aa12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 CD2APQ9Y5K6 639 aa12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 ZNF609O15014 1411 aa12.95□□□□□ -0.34
TNFRSF1A-211ENST00000538363 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 CDC45O75419 566 aa12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 HIBADHP31937 336 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 DALRD3Q5D0E6 543 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 POTEHQ6S545 545 aa12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 VGLL2Q8N8G2 317 aa12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 SUPT20HQ8NEM7 779 aa12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 EVI5LQ96CN4 794 aa12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-211ENST00000538363 SNAP23O00161 211 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 RIMBP2O15034 1052 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 C21orf2O43822 256 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 SDSP20132 328 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 GYG1P46976 350 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 BCAMP50895 628 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 TTF1Q15361 905 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 WASHC4Q2M389 1173 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 GRIPAP1Q4V328 841 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 SOGA3Q5TF21 947 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 FBXW7Q969H0 707 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 SNRKQ9NRH2 765 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 DIAPH3Q9NSV4 1193 aa12.93□□□□□ -0.34
TNFRSF1A-211ENST00000538363 HIP1O00291 1037 aa12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 GOLIM4O00461 696 aa12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 FGFR2P21802 821 aa12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 PHKA1P46020 1223 aa12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 CCDC93Q567U6 631 aa12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 RUFY2Q8WXA3 655 aa12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 PAG1Q9NWQ8 432 aa12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 IQSEC3Q9UPP2 1182 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
TNFRSF1A-211ENST00000538363 CHAF1AQ13111 956 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 RTKN2Q8IZC4 609 aa12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 TBC1D16Q8TBP0 767 aa12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 PI4K2BQ8TCG2 481 aa12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 HAUS7Q99871 368 aa12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 DENND2AQ9ULE3 1009 aa12.91□□□□□ -0.34
TNFRSF1A-211ENST00000538363 SALL3Q9BXA9 1300 aa12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 GSPT1P15170 499 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 SPATA5Q8NB90 893 aa12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 NLGN2Q8NFZ4 835 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms