RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 LRP10Q7Z4F1 713 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 RTFDC1Q9BY42 306 aaPredicted RBP4.36□□□□□ -1.71
PTPN22-211ENST00000538253 UBR3Q6ZT12 1888 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 TAF1LQ8IZX4 1826 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 CASZ1Q86V15 1759 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 IFIT2P09913 472 aaKnown RBP4.36□□□□□ -1.71
PTPN22-211ENST00000538253 TRIM27P14373 513 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 PROSER3Q2NL68 480 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 CIAPIN1Q6FI81 312 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 AGBL3Q8NEM8 1001 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 TTLL11Q8NHH1 800 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 CDCA7LQ96GN5 454 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 BCL2L13Q9BXK5 485 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPN22-211ENST00000538253 ZNRF3Q9ULT6 936 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 DUOX1Q9NRD9 1551 aa4.36□□□□□ -1.71
PTPN22-211ENST00000538253 SRGAP3O43295 1099 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 UFL1O94874 794 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 KCNQ4P56696 695 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 KIAA2012Q0VF49 1180 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 WASHC4Q2M389 1173 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 RTL5Q5HYW3 569 aaPredicted RBP4.35□□□□□ -1.71
PTPN22-211ENST00000538253 SYNE4Q8N205 404 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 FAM89AQ96GI7 184 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 UNCXA6NJT0 531 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 ANKRD44Q8N8A2 993 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 RGS22Q8NE09 1264 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTPN22-211ENST00000538253 DPF2Q92785 391 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 NSFL1CQ9UNZ2 370 aaKnown RBP4.35□□□□□ -1.71
PTPN22-211ENST00000538253 PPP2R3BQ9Y5P8 575 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 ZNF804BA4D1E1 1349 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 ANXA1P04083 346 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 IGKV5-2P06315 115 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 HCLS1P14317 486 aaPredicted RBP4.35□□□□□ -1.71
PTPN22-211ENST00000538253 ATP2B3Q16720 1220 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 REM2Q8IYK8 340 aaPredicted RBP4.35□□□□□ -1.71
PTPN22-211ENST00000538253 ZC3H15Q8WU90 426 aaKnown RBP4.35□□□□□ -1.71
PTPN22-211ENST00000538253 CLUAP1Q96AJ1 413 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 MRIQ9BWK5 157 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 RNF181Q9P0P0 153 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 NOP58Q9Y2X3 529 aaKnown RBP4.35□□□□□ -1.71
PTPN22-211ENST00000538253 BCORQ6W2J9 1755 aa4.35□□□□□ -1.71
PTPN22-211ENST00000538253 AOX1Q06278 1338 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 UBN2Q6ZU65 1347 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 PRAMEF22A3QJZ6 481 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 SURF6O75683 361 aaKnown RBP4.34□□□□□ -1.71
PTPN22-211ENST00000538253 BAG3O95817 575 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 ZFYP08048 801 aaPredicted RBP4.34□□□□□ -1.71
PTPN22-211ENST00000538253 VEGFAP15692 232 aaPredicted RBP4.34□□□□□ -1.71
PTPN22-211ENST00000538253 HIBADHP31937 336 aaKnown RBP4.34□□□□□ -1.71
PTPN22-211ENST00000538253 NBR1Q14596 966 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 KRT24Q2M2I5 525 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 G2E3Q7L622 706 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 GPC2Q8N158 579 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 FSTL1Q12841 308 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 TTC39AQ5SRH9 613 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 STRIP1Q5VSL9 837 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 USP50Q70EL3 339 aaPredicted RBP4.34□□□□□ -1.71
PTPN22-211ENST00000538253 NUTM1Q86Y26 1132 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 TMEM57Q8N5G2 664 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 SSH3Q8TE77 659 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 CHMP4CQ96CF2 233 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 ZNF512BQ96KM6 892 aaPredicted RBP4.34□□□□□ -1.71
PTPN22-211ENST00000538253 LRRCC1Q9C099 1032 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 USP44Q9H0E7 712 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 ZNF287Q9HBT7 754 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 FOXD4L1Q9NU39 408 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 GINM1Q9NU53 330 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 HACL1Q9UJ83 578 aa4.34□□□□□ -1.71
PTPN22-211ENST00000538253 A0A0G2JLW4 131 aa4.34□□□□□ -1.72
PTPN22-211ENST00000538253 USP17L3A6NCW0 530 aa4.34□□□□□ -1.72
PTPN22-211ENST00000538253 USP17L4A6NCW7 530 aa4.34□□□□□ -1.72
PTPN22-211ENST00000538253 F6X3S4 739 aa4.34□□□□□ -1.72
PTPN22-211ENST00000538253 CWF19L2Q2TBE0 894 aaKnown RBP4.34□□□□□ -1.72
PTPN22-211ENST00000538253 USP17L1Q7RTZ2 530 aa4.34□□□□□ -1.72
PTPN22-211ENST00000538253 APOBEC3FQ8IUX4 373 aaKnown RBP4.34□□□□□ -1.72
PTPN22-211ENST00000538253 RUFY2Q8WXA3 655 aa4.34□□□□□ -1.72
PTPN22-211ENST00000538253 LRRFIP2Q9Y608 721 aaKnown RBP4.34□□□□□ -1.72
PTPN22-211ENST00000538253 COL24A1Q17RW2 1714 aa4.34□□□□□ -1.72
PTPN22-211ENST00000538253 TTC41PQ6P2S7 1318 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 ZNF609O15014 1411 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 C21orf2O43822 256 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 PDE8BO95263 885 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 PTMAP06454 111 aaKnown RBP4.33□□□□□ -1.72
PTPN22-211ENST00000538253 MAP3K12Q12852 859 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 HDAC1Q13547 482 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-211ENST00000538253 C9orf131Q5VYM1 1079 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 SUCLG2Q96I99 432 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 ARID3AQ99856 593 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 TBC1D2Q9BYX2 928 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 BICC1Q9H694 974 aaKnown RBP4.33□□□□□ -1.72
PTPN22-211ENST00000538253 GPBP1L1Q9HC44 474 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-211ENST00000538253 TCERG1O14776 1098 aaKnown RBP4.33□□□□□ -1.72
PTPN22-211ENST00000538253 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
PTPN22-211ENST00000538253 MCCP23508 829 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 YY1P25490 414 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 POTEGQ6S5H5 508 aa4.33□□□□□ -1.72
PTPN22-211ENST00000538253 RPAP1Q9BWH6 1393 aaPredicted RBP4.33□□□□□ -1.72
PTPN22-211ENST00000538253 GLTPD2A6NH11 291 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms