RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 EYA2O00167 538 aa28.76■■■□□ 2.19
CLTA-209ENST00000538225 SMC1BQ8NDV3 1235 aa28.76■■■□□ 2.19
CLTA-209ENST00000538225 ZBTB7BO15156 539 aaPredicted RBP28.75■■■□□ 2.19
CLTA-209ENST00000538225 SRGAP3O43295 1099 aa28.75■■■□□ 2.19
CLTA-209ENST00000538225 PA2G4Q9UQ80 394 aaKnown RBP28.75■■■□□ 2.19
CLTA-209ENST00000538225 IRS2Q9Y4H2 1338 aa28.74■■■□□ 2.19
CLTA-209ENST00000538225 C15orf52Q6ZUT6 534 aaKnown RBP28.74■■■□□ 2.19
CLTA-209ENST00000538225 PNMA8AQ86V59 439 aaPredicted RBP28.74■■■□□ 2.19
CLTA-209ENST00000538225 SCN9AQ15858 1988 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 USP17L3A6NCW0 530 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 USP17L4A6NCW7 530 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 VIL1P09327 827 aaKnown RBP28.73■■■□□ 2.19
CLTA-209ENST00000538225 FSTL1Q12841 308 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 UBE4AQ14139 1066 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 USP17L1Q7RTZ2 530 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 FBXW7Q969H0 707 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 C1orf115Q9H7X2 142 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 CNOT7Q9UIV1 285 aaKnown RBP28.73■■■□□ 2.19
CLTA-209ENST00000538225 CLEC11AQ9Y240 323 aa28.73■■■□□ 2.19
CLTA-209ENST00000538225 SHTN1A0MZ66 631 aa28.72■■■□□ 2.19
CLTA-209ENST00000538225 PDE8BO95263 885 aa28.72■■■□□ 2.19
CLTA-209ENST00000538225 MTX1Q13505 466 aa28.72■■■□□ 2.19
CLTA-209ENST00000538225 ATG9AQ7Z3C6 839 aa28.72■■■□□ 2.19
CLTA-209ENST00000538225 VGLL2Q8N8G2 317 aa28.72■■■□□ 2.19
CLTA-209ENST00000538225 CD209Q9NNX6 404 aa28.72■■■□□ 2.19
CLTA-209ENST00000538225 LDHDQ86WU2 507 aa28.71■■■□□ 2.19
CLTA-209ENST00000538225 MICALL2Q8IY33 904 aa28.71■■■□□ 2.19
CLTA-209ENST00000538225 COPRSQ9NQ92 184 aa28.71■■■□□ 2.19
CLTA-209ENST00000538225 COG6Q9Y2V7 657 aa28.71■■■□□ 2.19
CLTA-209ENST00000538225 CIAO1O76071 339 aa28.7■■■□□ 2.18
CLTA-209ENST00000538225 RPS12P25398 132 aaKnown RBP28.7■■■□□ 2.18
CLTA-209ENST00000538225 CHADLQ6NUI6 762 aa28.7■■■□□ 2.18
CLTA-209ENST00000538225 RSBN1LQ6PCB5 846 aaPredicted RBP28.7■■■□□ 2.18
CLTA-209ENST00000538225 ZNF804AQ7Z570 1209 aa28.7■■■□□ 2.18
CLTA-209ENST00000538225 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.7■■■□□ 2.18
CLTA-209ENST00000538225 DPF2Q92785 391 aa28.7■■■□□ 2.18
CLTA-209ENST00000538225 ADARB2Q9NS39 739 aaKnown RBP28.7■■■□□ 2.18
CLTA-209ENST00000538225 PNMA6EA0A0J9YXQ4 647 aa28.69■■■□□ 2.18
CLTA-209ENST00000538225 H7C1D1 291 aa28.69■■■□□ 2.18
CLTA-209ENST00000538225 FBXO3Q9UK99 471 aa28.69■■■□□ 2.18
CLTA-209ENST00000538225 GYG1P46976 350 aa28.68■■■□□ 2.18
CLTA-209ENST00000538225 MVPQ14764 893 aaKnown RBP28.68■■■□□ 2.18
CLTA-209ENST00000538225 USP50Q70EL3 339 aaPredicted RBP28.68■■■□□ 2.18
CLTA-209ENST00000538225 MXD3Q9BW11 206 aa28.68■■■□□ 2.18
CLTA-209ENST00000538225 IL15P40933 162 aaPredicted RBP28.67■■■□□ 2.18
CLTA-209ENST00000538225 GTF2IP78347 998 aa28.67■■■□□ 2.18
CLTA-209ENST00000538225 C20orf194Q5TEA3 1177 aa28.67■■■□□ 2.18
CLTA-209ENST00000538225 TTLL5Q6EMB2 1281 aa28.67■■■□□ 2.18
CLTA-209ENST00000538225 HSPA6P17066 643 aa28.66■■■□□ 2.18
CLTA-209ENST00000538225 PUM3Q15397 648 aaKnown RBP28.66■■■□□ 2.18
CLTA-209ENST00000538225 DACT2Q5SW24 774 aa28.66■■■□□ 2.18
CLTA-209ENST00000538225 STRIP1Q5VSL9 837 aa28.66■■■□□ 2.18
CLTA-209ENST00000538225 AGBL3Q8NEM8 1001 aa28.66■■■□□ 2.18
CLTA-209ENST00000538225 FAM84BQ96KN1 310 aaPredicted RBP28.66■■■□□ 2.18
CLTA-209ENST00000538225 CEP126Q9P2H0 1117 aa28.66■■■□□ 2.18
CLTA-209ENST00000538225 IL1R1P14778 569 aa28.65■■■□□ 2.18
CLTA-209ENST00000538225 HIBADHP31937 336 aaKnown RBP28.65■■■□□ 2.18
CLTA-209ENST00000538225 ATP8B2P98198 1209 aa28.65■■■□□ 2.18
CLTA-209ENST00000538225 SAMD7Q7Z3H4 446 aa28.65■■■□□ 2.18
CLTA-209ENST00000538225 FGFR2P21802 821 aa28.64■■■□□ 2.18
CLTA-209ENST00000538225 RBM26Q5T8P6 1007 aaKnown RBP28.64■■■□□ 2.18
CLTA-209ENST00000538225 MAP1SQ66K74 1059 aaPredicted RBP28.64■■■□□ 2.18
CLTA-209ENST00000538225 TRPM4Q8TD43 1214 aa28.64■■■□□ 2.18
CLTA-209ENST00000538225 DDX19BQ9UMR2 479 aa28.64■■■□□ 2.18
CLTA-209ENST00000538225 IFIT1P09914 478 aaKnown RBP28.63■■■□□ 2.17
CLTA-209ENST00000538225 PDE3AQ14432 1141 aa28.63■■■□□ 2.17
CLTA-209ENST00000538225 TBC1D10BQ4KMP7 808 aaPredicted RBP28.63■■■□□ 2.17
CLTA-209ENST00000538225 VPS37DQ86XT2 251 aa28.63■■■□□ 2.17
CLTA-209ENST00000538225 GMLQ99445 158 aa28.63■■■□□ 2.17
CLTA-209ENST00000538225 PSME4Q14997 1843 aa28.62■■■□□ 2.17
CLTA-209ENST00000538225 SLC5A1P13866 664 aa28.62■■■□□ 2.17
CLTA-209ENST00000538225 HIRAP54198 1017 aaPredicted RBP28.62■■■□□ 2.17
CLTA-209ENST00000538225 CAVIN4Q5BKX8 364 aa28.62■■■□□ 2.17
CLTA-209ENST00000538225 LPIN2Q92539 896 aa28.62■■■□□ 2.17
CLTA-209ENST00000538225 JAG2Q9Y219 1238 aa28.62■■■□□ 2.17
CLTA-209ENST00000538225 ADAMTSL1Q8N6G6 1762 aa28.61■■■□□ 2.17
CLTA-209ENST00000538225 EGFRP00533 1210 aa28.61■■■□□ 2.17
CLTA-209ENST00000538225 USP17L8P0C7I0 530 aa28.61■■■□□ 2.17
CLTA-209ENST00000538225 POLA2Q14181 598 aa28.61■■■□□ 2.17
CLTA-209ENST00000538225 FBXO33Q7Z6M2 555 aa28.61■■■□□ 2.17
CLTA-209ENST00000538225 BCAMP50895 628 aa28.6■■■□□ 2.17
CLTA-209ENST00000538225 ATP2B3Q16720 1220 aa28.6■■■□□ 2.17
CLTA-209ENST00000538225 CNTROBQ8N137 903 aa28.6■■■□□ 2.17
CLTA-209ENST00000538225 TDRD7Q8NHU6 1098 aaKnown RBP28.6■■■□□ 2.17
CLTA-209ENST00000538225 SSH3Q8TE77 659 aa28.6■■■□□ 2.17
CLTA-209ENST00000538225 IQSEC3Q9UPP2 1182 aaPredicted RBP28.6■■■□□ 2.17
CLTA-209ENST00000538225 SASH1O94885 1247 aa28.59■■■□□ 2.17
CLTA-209ENST00000538225 TFCP2Q12800 502 aa28.59■■■□□ 2.17
CLTA-209ENST00000538225 G3BP1Q13283 466 aaKnown RBP eCLIP28.59■■■□□ 2.17
CLTA-209ENST00000538225 CEP85Q6P2H3 762 aa28.59■■■□□ 2.17
CLTA-209ENST00000538225 MYO3BQ8WXR4 1341 aa28.59■■■□□ 2.17
CLTA-209ENST00000538225 ZNF609O15014 1411 aa28.59■■■□□ 2.17
CLTA-209ENST00000538225 ZNF280AP59817 542 aaPredicted RBP28.58■■■□□ 2.17
CLTA-209ENST00000538225 ZBTB40Q9NUA8 1239 aa28.58■■■□□ 2.17
CLTA-209ENST00000538225 ITGBL1O95965 494 aaPredicted RBP28.57■■■□□ 2.16
CLTA-209ENST00000538225 KIF4BQ2VIQ3 1234 aa28.57■■■□□ 2.16
CLTA-209ENST00000538225 KIAA0825Q8IV33 1275 aa28.57■■■□□ 2.16
CLTA-209ENST00000538225 FRAT2O75474 233 aaPredicted RBP28.56■■■□□ 2.16
CLTA-209ENST00000538225 OGFOD1Q8N543 542 aa28.56■■■□□ 2.16
CLTA-209ENST00000538225 CERS5Q8N5B7 392 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms