RNA–Protein interactions for RNA: ENST00000537880.1

TCHP-205, Transcript of trichoplein keratin filament binding, humanhuman

TSL 1 (best)

Gene TCHP, Length 2,817 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-205ENST00000537880 KCNF1Q9H3M0 494 aa13.11□□□□□ -0.31
TCHP-205ENST00000537880 RTL9Q8NET4 1388 aa13.1□□□□□ -0.31
TCHP-205ENST00000537880 CSF1RP07333 972 aa13.1□□□□□ -0.31
TCHP-205ENST00000537880 BMP2KLQ5H9B9 411 aa13.1□□□□□ -0.31
TCHP-205ENST00000537880 MBD3O95983 291 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 HNRNPH2P55795 449 aaKnown RBP13.09□□□□□ -0.31
TCHP-205ENST00000537880 SUSD4Q5VX71 490 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 USPL1Q5W0Q7 1092 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 SMIM5Q71RC9 77 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 TSPYL1Q9H0U9 437 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 PSEN1P49768 467 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 MMP14P50281 582 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 TRAPPC3LQ5T215 181 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 CCDC125Q86Z20 511 aa13.09□□□□□ -0.31
TCHP-205ENST00000537880 SRP68Q9UHB9 627 aaKnown RBP13.09□□□□□ -0.31
TCHP-205ENST00000537880 MYCNP04198 464 aaPredicted RBP13.08□□□□□ -0.31
TCHP-205ENST00000537880 KIAA1551Q9HCM1 1747 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.08□□□□□ -0.32
TCHP-205ENST00000537880 LOC102724159A0A0B4J2E5 919 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 TNNT3P45378 269 aaPredicted RBP13.08□□□□□ -0.32
TCHP-205ENST00000537880 PLCB2Q00722 1185 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 RAD51AP2Q09MP3 1159 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 PWP2Q15269 919 aaKnown RBP13.08□□□□□ -0.32
TCHP-205ENST00000537880 ANKRD45Q5TZF3 282 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 TBC1D9BQ66K14 1250 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 SALL3Q9BXA9 1300 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 GPTP24298 496 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 CHD1LQ86WJ1 897 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 TMX1Q9H3N1 280 aa13.08□□□□□ -0.32
TCHP-205ENST00000537880 PNPLA7Q6ZV29 1317 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 SRGAP3O43295 1099 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 GYS1P13807 737 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 EZH2Q15910 746 aaKnown RBP13.07□□□□□ -0.32
TCHP-205ENST00000537880 COPRSQ9NQ92 184 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 GEMIN8Q9NWZ8 242 aaKnown RBP13.07□□□□□ -0.32
TCHP-205ENST00000537880 LTBP1Q14766 1721 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 CARMIL3Q8ND23 1372 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 RABEP1Q15276 862 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 YY1AP1Q9H869 796 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 RSPH14Q9UHP6 348 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 KCNG1Q9UIX4 513 aa13.07□□□□□ -0.32
TCHP-205ENST00000537880 NIP7Q9Y221 180 aaKnown RBP eCLIP13.07□□□□□ -0.32
TCHP-205ENST00000537880 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 SLC10A5Q5PT55 438 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 UTP14AQ9BVJ6 771 aaKnown RBP13.06□□□□□ -0.32
TCHP-205ENST00000537880 CWC22Q9HCG8 908 aaKnown RBP13.06□□□□□ -0.32
TCHP-205ENST00000537880 ABCC12Q96J65 1359 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 RAB11FIP3O75154 756 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 ZPR1O75312 459 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 TM4SF1P30408 202 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 SYCP1Q15431 976 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 UVSSAQ2YD98 709 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
TCHP-205ENST00000537880 SH3TC1Q8TE82 1336 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
TCHP-205ENST00000537880 RFC4P35249 363 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 PTPN12Q05209 780 aaKnown RBP13.05□□□□□ -0.32
TCHP-205ENST00000537880 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
TCHP-205ENST00000537880 SYNE4Q8N205 404 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 SPC24Q8NBT2 197 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 EFCC1Q9HA90 598 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 CACNA1SQ13698 1873 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 PDE8AO60658 829 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 CTSWP56202 376 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 FOXD4L6Q3SYB3 417 aaPredicted RBP13.05□□□□□ -0.32
TCHP-205ENST00000537880 KMT5BQ4FZB7 885 aa13.05□□□□□ -0.32
TCHP-205ENST00000537880 FOXD4L3Q6VB84 417 aaPredicted RBP13.05□□□□□ -0.32
TCHP-205ENST00000537880 BAG6P46379 1132 aa13.04□□□□□ -0.32
TCHP-205ENST00000537880 LMBR1LQ6UX01 489 aa13.04□□□□□ -0.32
TCHP-205ENST00000537880 COL23A1Q86Y22 540 aaPredicted RBP13.04□□□□□ -0.32
TCHP-205ENST00000537880 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
TCHP-205ENST00000537880 C16orf45Q96MC5 204 aaPredicted RBP13.04□□□□□ -0.32
TCHP-205ENST00000537880 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
TCHP-205ENST00000537880 IRS4O14654 1257 aaPredicted RBP13.04□□□□□ -0.32
TCHP-205ENST00000537880 GADD45BO75293 160 aaPredicted RBP13.04□□□□□ -0.32
TCHP-205ENST00000537880 TTLL11Q8NHH1 800 aa13.04□□□□□ -0.32
TCHP-205ENST00000537880 GDPD2Q9HCC8 539 aa13.04□□□□□ -0.32
TCHP-205ENST00000537880 AP5Z1O43299 807 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 PHF14O94880 888 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 APPP05067 770 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 CYP2C19P33261 490 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 C16orf71Q8IYS4 520 aaPredicted RBP13.03□□□□□ -0.32
TCHP-205ENST00000537880 SYAP1Q96A49 352 aaPredicted RBP13.03□□□□□ -0.32
TCHP-205ENST00000537880 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 NOP2P46087 812 aaKnown RBP13.03□□□□□ -0.32
TCHP-205ENST00000537880 NFIXQ14938 502 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 HSP90AB4PQ58FF6 505 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 FBXO3Q9UK99 471 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 EXOC6BQ9Y2D4 811 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
TCHP-205ENST00000537880 SMTNL1A8MU46 457 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 KDM4AO75164 1064 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
TCHP-205ENST00000537880 AKAP11Q9UKA4 1901 aa13.02□□□□□ -0.32
TCHP-205ENST00000537880 MYH7P12883 1935 aa13.02□□□□□ -0.32
TCHP-205ENST00000537880 MYH13Q9UKX3 1938 aa13.02□□□□□ -0.32
TCHP-205ENST00000537880 SMARCA5O60264 1052 aaPredicted RBP13.02□□□□□ -0.33
TCHP-205ENST00000537880 CIAO1O76071 339 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms