RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 BATF3Q9NR55 127 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 HOMER3Q9NSC5 361 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 PPP6R1Q9UPN7 881 aa9.79□□□□□ -0.84
SRGAP1-202ENST00000537556 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 AARSP49588 968 aaKnown RBP eCLIP9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 RPS6KA3P51812 740 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 ISM2Q6H9L7 571 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 RCSD1Q6JBY9 416 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 CCDC83Q8IWF9 413 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 RPUSD2Q8IZ73 545 aaKnown RBP9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 SAAL1Q96ER3 474 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 XAGE2Q96GT9 111 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 STK31Q9BXU1 1019 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 KLC4Q9NSK0 619 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 A6NNZ2 444 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 VAMP4O75379 141 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 SETSIPP0DME0 302 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 FNTAP49354 379 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 TUBB8Q3ZCM7 444 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 MICALCLQ6ZW33 695 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 AOPEPQ8N6M6 819 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 BCAS4Q8TDM0 211 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 XPO4Q9C0E2 1151 aaKnown RBP9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 WDHD1O75717 1129 aaPredicted RBP9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 CEP85Q6P2H3 762 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 FAM177A1Q8N128 213 aaPredicted RBP9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 MICAL1Q8TDZ2 1067 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 TCP11Q8WWU5 503 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 ANKZF1Q9H8Y5 726 aa9.78□□□□□ -0.84
SRGAP1-202ENST00000537556 MYO1FO00160 1098 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 FANCGO15287 622 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 ARHGAP6O43182 974 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 SMTNP53814 917 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 NAA25Q14CX7 972 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 ZNF526Q8TF50 670 aaPredicted RBP9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 RILPL2Q969X0 211 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 SUDS3Q9H7L9 328 aaPredicted RBP9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 ERVK-7P63135 1459 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 VWA3AA6NCI4 1184 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 ECM2O94769 699 aaPredicted RBP9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 IRAK1P51617 712 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 PSMD2Q13200 908 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 PLCB4Q15147 1175 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 SLC5A9Q2M3M2 681 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 ANKRD23Q86SG2 305 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 FAM76AQ8TAV0 307 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 MAGEC3Q8TD91 643 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 IFNKQ9P0W0 207 aa9.77□□□□□ -0.85
SRGAP1-202ENST00000537556 CUTAO60888 179 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 FERMT3Q86UX7 667 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 DHX58Q96C10 678 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 THOC1Q96FV9 657 aaKnown RBP9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 RSRC1Q96IZ7 334 aaKnown RBP9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 KIF9Q9HAQ2 790 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 ADGRL3Q9HAR2 1447 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 ATP6V0A4Q9HBG4 840 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 PPP2R2CQ9Y2T4 447 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 KIAA0556O60303 1618 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 MADDQ8WXG6 1647 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 MEFVO15553 781 aaPredicted RBP9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 AP1G2O75843 785 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 PRPF6O94906 941 aaKnown RBP9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 GBP2P32456 591 aaPredicted RBP9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 CEP57Q86XR8 500 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 DRAXINQ8NBI3 349 aaPredicted RBP9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 TFIP11Q9UBB9 837 aaKnown RBP9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 SNX14Q9Y5W7 946 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 EVC2Q86UK5 1308 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 CDHR2Q9BYE9 1310 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 ATP10DQ9P241 1426 aa9.76□□□□□ -0.85
SRGAP1-202ENST00000537556 GIGYF1O75420 1035 aaPredicted RBP9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 SLC8A1P32418 973 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 PPFIA1Q13136 1202 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 SF3B2Q13435 895 aaKnown RBP9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 YTHDF3Q7Z739 585 aaKnown RBP9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 MAB21L3Q8N8X9 362 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 IGSF22Q8N9C0 903 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 CCDC12Q8WUD4 166 aaPredicted RBP9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 WDR24Q96S15 920 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 HYPKQ9NX55 129 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 CFAP45Q9UL16 551 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 ARHGEF5Q12774 1597 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 MCM3P25205 808 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 SNCBQ16143 134 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 SPDL1Q96EA4 605 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 BPIFA3Q9BQP9 254 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 CRACR2AQ9BSW2 395 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 CHCHD3Q9NX63 227 aaKnown RBP9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 EME2A4GXA9 379 aaPredicted RBP9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 CCDC40Q4G0X9 1142 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 FILIP1LQ4L180 1135 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 CCDC73Q6ZRK6 1079 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 CDC37L1Q7L3B6 337 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 PGBD1Q96JS3 809 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 PNKPQ96T60 521 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 CAPS2Q9BXY5 557 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 LRRCC1Q9C099 1032 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 SUGCTQ9HAC7 445 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 DIP2BQ9P265 1576 aa9.75□□□□□ -0.85
SRGAP1-202ENST00000537556 EIF3HO15372 352 aaKnown RBP eCLIP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms