RNA–Protein interactions for RNA: ENST00000537358.1

CCDC170-202, Transcript of coiled-coil domain containing 170, humanhuman

TSL 3

Gene CCDC170, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-202ENST00000537358 DNAAF4Q8WXU2 420 aa12.53□□□□□ -0.4
CCDC170-202ENST00000537358 MPHOSPH8Q99549 860 aa12.53□□□□□ -0.4
CCDC170-202ENST00000537358 GREM2Q9H772 168 aa12.53□□□□□ -0.4
CCDC170-202ENST00000537358 KCNQ5Q9NR82 932 aa12.53□□□□□ -0.4
CCDC170-202ENST00000537358 USP17L3A6NCW0 530 aa12.52□□□□□ -0.41
CCDC170-202ENST00000537358 USP17L4A6NCW7 530 aa12.52□□□□□ -0.41
CCDC170-202ENST00000537358 HSPA8P11142 646 aaKnown RBP12.52□□□□□ -0.41
CCDC170-202ENST00000537358 HUNKP57058 714 aa12.52□□□□□ -0.41
CCDC170-202ENST00000537358 GCKRQ14397 625 aa12.52□□□□□ -0.41
CCDC170-202ENST00000537358 G2E3Q7L622 706 aa12.52□□□□□ -0.41
CCDC170-202ENST00000537358 USP17L1Q7RTZ2 530 aa12.52□□□□□ -0.41
CCDC170-202ENST00000537358 LINS1Q8NG48 757 aa12.52□□□□□ -0.41
CCDC170-202ENST00000537358 MED23Q9ULK4 1368 aa12.52□□□□□ -0.41
CCDC170-202ENST00000537358 H7C1W4 665 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 AOC2O75106 756 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 USP17L8P0C7I0 530 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 KCNJ4P48050 445 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 CCT4P50991 539 aaKnown RBP12.51□□□□□ -0.41
CCDC170-202ENST00000537358 NOGQ13253 232 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 OGFOD1Q8N543 542 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 ANKRD2Q9GZV1 360 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
CCDC170-202ENST00000537358 GGA3Q9NZ52 723 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 MINPP1Q9UNW1 487 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 LEMD3Q9Y2U8 911 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 ZNF609O15014 1411 aa12.51□□□□□ -0.41
CCDC170-202ENST00000537358 ITGA6P23229 1130 aa12.5□□□□□ -0.41
CCDC170-202ENST00000537358 BRPF1P55201 1214 aaPredicted RBP12.5□□□□□ -0.41
CCDC170-202ENST00000537358 ZNF280AP59817 542 aaPredicted RBP12.5□□□□□ -0.41
CCDC170-202ENST00000537358 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
CCDC170-202ENST00000537358 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
CCDC170-202ENST00000537358 PLA2G12BQ9BX93 195 aa12.5□□□□□ -0.41
CCDC170-202ENST00000537358 MYO3BQ8WXR4 1341 aa12.5□□□□□ -0.41
CCDC170-202ENST00000537358 ANKRD18BA2A2Z9 1011 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 VAMP4O75379 141 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 EGFRP00533 1210 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 MMP14P50281 582 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 FAM9BQ8IZU0 186 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 CCDC102AQ96A19 550 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 COA1Q9GZY4 146 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 MYOZ2Q9NPC6 264 aa12.49□□□□□ -0.41
CCDC170-202ENST00000537358 PITPNM2Q9BZ72 1349 aa12.48□□□□□ -0.41
CCDC170-202ENST00000537358 SCARF1Q14162 830 aa12.48□□□□□ -0.41
CCDC170-202ENST00000537358 FAM161AQ3B820 660 aa12.48□□□□□ -0.41
CCDC170-202ENST00000537358 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
CCDC170-202ENST00000537358 RGMBQ6NW40 437 aa12.48□□□□□ -0.41
CCDC170-202ENST00000537358 CHMP3Q9Y3E7 222 aa12.48□□□□□ -0.41
CCDC170-202ENST00000537358 ZNF804BA4D1E1 1349 aa12.47□□□□□ -0.41
CCDC170-202ENST00000537358 ZNF157P51786 506 aaPredicted RBP12.47□□□□□ -0.41
CCDC170-202ENST00000537358 IFIT5Q13325 482 aaKnown RBP12.47□□□□□ -0.41
CCDC170-202ENST00000537358 TAF7LQ5H9L4 462 aa12.47□□□□□ -0.41
CCDC170-202ENST00000537358 STRIP1Q5VSL9 837 aa12.47□□□□□ -0.41
CCDC170-202ENST00000537358 HDAC9Q9UKV0 1011 aa12.47□□□□□ -0.41
CCDC170-202ENST00000537358 AKAP11Q9UKA4 1901 aa12.47□□□□□ -0.41
CCDC170-202ENST00000537358 CSF1RP07333 972 aa12.46□□□□□ -0.41
CCDC170-202ENST00000537358 NF2P35240 595 aa12.46□□□□□ -0.41
CCDC170-202ENST00000537358 FKBP1BP68106 108 aa12.46□□□□□ -0.41
CCDC170-202ENST00000537358 TTLL5Q6EMB2 1281 aa12.46□□□□□ -0.41
CCDC170-202ENST00000537358 CDCA5Q96FF9 252 aa12.46□□□□□ -0.41
CCDC170-202ENST00000537358 GMLQ99445 158 aa12.46□□□□□ -0.41
CCDC170-202ENST00000537358 C9orf78Q9NZ63 289 aaPredicted RBP12.46□□□□□ -0.41
CCDC170-202ENST00000537358 F6X3S4 739 aa12.45□□□□□ -0.42
CCDC170-202ENST00000537358 CASP7P55210 303 aa12.45□□□□□ -0.42
CCDC170-202ENST00000537358 CHRNDQ07001 517 aa12.45□□□□□ -0.42
CCDC170-202ENST00000537358 CCDC57Q2TAC2 916 aa12.45□□□□□ -0.42
CCDC170-202ENST00000537358 DACT2Q5SW24 774 aa12.45□□□□□ -0.42
CCDC170-202ENST00000537358 TSKSQ9UJT2 592 aa12.45□□□□□ -0.42
CCDC170-202ENST00000537358 PAPPA2Q9BXP8 1791 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 CASP8AP2Q9UKL3 1982 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 GRM8O00222 908 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 BEND3Q5T5X7 828 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 SLC4A10Q6U841 1118 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 DLK2Q6UY11 383 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 REM2Q8IYK8 340 aaPredicted RBP12.44□□□□□ -0.42
CCDC170-202ENST00000537358 ABHD8Q96I13 439 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 SSUH2Q9Y2M2 353 aa12.44□□□□□ -0.42
CCDC170-202ENST00000537358 ASTN2O75129 1339 aaPredicted RBP12.43□□□□□ -0.42
CCDC170-202ENST00000537358 WTIPA6NIX2 430 aaPredicted RBP12.43□□□□□ -0.42
CCDC170-202ENST00000537358 ALDH1L1O75891 902 aa12.43□□□□□ -0.42
CCDC170-202ENST00000537358 GTF2IP78347 998 aa12.43□□□□□ -0.42
CCDC170-202ENST00000537358 TTLL12Q14166 644 aaPredicted RBP12.43□□□□□ -0.42
CCDC170-202ENST00000537358 SRCIN1Q9C0H9 1055 aa12.43□□□□□ -0.42
CCDC170-202ENST00000537358 CNNM1Q9NRU3 951 aa12.43□□□□□ -0.42
CCDC170-202ENST00000537358 SAGE1Q9NXZ1 904 aa12.43□□□□□ -0.42
CCDC170-202ENST00000537358 SLC10A3P09131 477 aa12.42□□□□□ -0.42
CCDC170-202ENST00000537358 FOXO4P98177 505 aa12.42□□□□□ -0.42
CCDC170-202ENST00000537358 KIF23Q02241 960 aaPredicted RBP12.42□□□□□ -0.42
CCDC170-202ENST00000537358 NBPF9Q3BBW0 867 aa12.42□□□□□ -0.42
CCDC170-202ENST00000537358 LMBR1LQ6UX01 489 aa12.42□□□□□ -0.42
CCDC170-202ENST00000537358 LDHAL6AQ6ZMR3 332 aa12.42□□□□□ -0.42
CCDC170-202ENST00000537358 TXNRD3Q86VQ6 643 aa12.42□□□□□ -0.42
CCDC170-202ENST00000537358 APOBEC3FQ8IUX4 373 aaKnown RBP12.42□□□□□ -0.42
CCDC170-202ENST00000537358 KIAA0825Q8IV33 1275 aa12.42□□□□□ -0.42
CCDC170-202ENST00000537358 CD209Q9NNX6 404 aa12.42□□□□□ -0.42
CCDC170-202ENST00000537358 ZNF646O15015 1829 aaPredicted RBP12.41□□□□□ -0.42
CCDC170-202ENST00000537358 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
CCDC170-202ENST00000537358 FAM155AB1AL88 458 aaPredicted RBP12.41□□□□□ -0.42
CCDC170-202ENST00000537358 WNT10BO00744 389 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms