RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 TSPYL6Q8N831 410 aa22.67■■□□□ 1.22
LTBR-206ENST00000536876 GREM2Q9H772 168 aa22.67■■□□□ 1.22
LTBR-206ENST00000536876 UBE2Q2LH0YL09 131 aa22.66■■□□□ 1.22
LTBR-206ENST00000536876 GNAI1P63096 354 aa22.66■■□□□ 1.22
LTBR-206ENST00000536876 TXNRD3Q86VQ6 643 aa22.66■■□□□ 1.22
LTBR-206ENST00000536876 TTLL11Q8NHH1 800 aa22.66■■□□□ 1.22
LTBR-206ENST00000536876 MINPP1Q9UNW1 487 aa22.66■■□□□ 1.22
LTBR-206ENST00000536876 HPS5Q9UPZ3 1129 aa22.66■■□□□ 1.22
LTBR-206ENST00000536876 MAP3K2Q9Y2U5 619 aa22.66■■□□□ 1.22
LTBR-206ENST00000536876 KLRK1P26718 216 aa22.65■■□□□ 1.22
LTBR-206ENST00000536876 REM2Q8IYK8 340 aaPredicted RBP22.65■■□□□ 1.22
LTBR-206ENST00000536876 WNT10BO00744 389 aa22.64■■□□□ 1.21
LTBR-206ENST00000536876 ZNF296Q8WUU4 475 aaPredicted RBP22.64■■□□□ 1.21
LTBR-206ENST00000536876 CDC5LQ99459 802 aaKnown RBP22.64■■□□□ 1.21
LTBR-206ENST00000536876 BSDC1Q9NW68 430 aaPredicted RBP22.64■■□□□ 1.21
LTBR-206ENST00000536876 SSC5DA1L4H1 1573 aa22.63■■□□□ 1.21
LTBR-206ENST00000536876 SASH1O94885 1247 aa22.63■■□□□ 1.21
LTBR-206ENST00000536876 TBC1D8O95759 1140 aa22.63■■□□□ 1.21
LTBR-206ENST00000536876 OTOFQ9HC10 1997 aa22.62■■□□□ 1.21
LTBR-206ENST00000536876 CCT4P50991 539 aaKnown RBP22.62■■□□□ 1.21
LTBR-206ENST00000536876 CWF19L2Q2TBE0 894 aaKnown RBP22.62■■□□□ 1.21
LTBR-206ENST00000536876 PI4KAP2A4QPH2 592 aa22.61■■□□□ 1.21
LTBR-206ENST00000536876 DDX58O95786 925 aaKnown RBP22.61■■□□□ 1.21
LTBR-206ENST00000536876 KSR2Q6VAB6 950 aa22.61■■□□□ 1.21
LTBR-206ENST00000536876 PI4KAP1Q8N8J0 262 aa22.61■■□□□ 1.21
LTBR-206ENST00000536876 ZBED3Q96IU2 234 aaPredicted RBP22.61■■□□□ 1.21
LTBR-206ENST00000536876 PRKRIP1Q9H875 184 aaPredicted RBP22.61■■□□□ 1.21
LTBR-206ENST00000536876 MKI67P46013 3256 aaKnown RBP22.6■■□□□ 1.21
LTBR-206ENST00000536876 NEURL1BA8MQ27 555 aa22.6■■□□□ 1.21
LTBR-206ENST00000536876 TM4SF4P48230 202 aa22.6■■□□□ 1.21
LTBR-206ENST00000536876 MKRN3Q13064 507 aaKnown RBP22.6■■□□□ 1.21
LTBR-206ENST00000536876 CCDC30Q5VVM6 783 aa22.6■■□□□ 1.21
LTBR-206ENST00000536876 R3HDMLQ9H3Y0 253 aa22.6■■□□□ 1.21
LTBR-206ENST00000536876 CENPFP49454 3210 aa22.6■■□□□ 1.21
LTBR-206ENST00000536876 CACNA1FO60840 1977 aa22.59■■□□□ 1.21
LTBR-206ENST00000536876 RBBP6Q7Z6E9 1792 aaKnown RBP22.59■■□□□ 1.21
LTBR-206ENST00000536876 STRIP1Q5VSL9 837 aa22.59■■□□□ 1.21
LTBR-206ENST00000536876 G2E3Q7L622 706 aa22.59■■□□□ 1.21
LTBR-206ENST00000536876 MYO3BQ8WXR4 1341 aa22.58■■□□□ 1.21
LTBR-206ENST00000536876 IRS2Q9Y4H2 1338 aa22.58■■□□□ 1.21
LTBR-206ENST00000536876 GPR25O00155 361 aa22.58■■□□□ 1.21
LTBR-206ENST00000536876 CASP7P55210 303 aa22.58■■□□□ 1.21
LTBR-206ENST00000536876 PTPN12Q05209 780 aaKnown RBP22.58■■□□□ 1.21
LTBR-206ENST00000536876 CALD1Q05682 793 aaKnown RBP22.58■■□□□ 1.21
LTBR-206ENST00000536876 NOM1Q5C9Z4 860 aaKnown RBP22.58■■□□□ 1.21
LTBR-206ENST00000536876 TSR2Q969E8 191 aaKnown RBP22.58■■□□□ 1.21
LTBR-206ENST00000536876 COA1Q9GZY4 146 aa22.58■■□□□ 1.21
LTBR-206ENST00000536876 ARAP2Q8WZ64 1704 aa22.57■■□□□ 1.2
LTBR-206ENST00000536876 H7C1W4 665 aa22.57■■□□□ 1.2
LTBR-206ENST00000536876 PRPF38BQ5VTL8 546 aaKnown RBP22.57■■□□□ 1.2
LTBR-206ENST00000536876 UBE3BQ7Z3V4 1068 aa22.57■■□□□ 1.2
LTBR-206ENST00000536876 FBXW7Q969H0 707 aa22.57■■□□□ 1.2
LTBR-206ENST00000536876 CFHR5Q9BXR6 569 aa22.57■■□□□ 1.2
LTBR-206ENST00000536876 PCDH10Q9P2E7 1040 aa22.57■■□□□ 1.2
LTBR-206ENST00000536876 FZD1Q9UP38 647 aa22.57■■□□□ 1.2
LTBR-206ENST00000536876 COL1A1P02452 1464 aaPredicted RBP22.57■■□□□ 1.2
LTBR-206ENST00000536876 BRCA2P51587 3418 aa22.57■■□□□ 1.2
LTBR-206ENST00000536876 TTLL12Q14166 644 aaPredicted RBP22.56■■□□□ 1.2
LTBR-206ENST00000536876 PKN2Q16513 984 aaKnown RBP22.55■■□□□ 1.2
LTBR-206ENST00000536876 LDLRAD1Q5T700 205 aa22.55■■□□□ 1.2
LTBR-206ENST00000536876 KIAA0825Q8IV33 1275 aa22.55■■□□□ 1.2
LTBR-206ENST00000536876 PLA2G12BQ9BX93 195 aa22.55■■□□□ 1.2
LTBR-206ENST00000536876 LEMD3Q9Y2U8 911 aa22.55■■□□□ 1.2
LTBR-206ENST00000536876 ZNF804BA4D1E1 1349 aa22.55■■□□□ 1.2
LTBR-206ENST00000536876 PRKG1Q13976 671 aa22.54■■□□□ 1.2
LTBR-206ENST00000536876 OGFOD1Q8N543 542 aa22.54■■□□□ 1.2
LTBR-206ENST00000536876 CERS5Q8N5B7 392 aa22.54■■□□□ 1.2
LTBR-206ENST00000536876 HDAC9Q9UKV0 1011 aa22.54■■□□□ 1.2
LTBR-206ENST00000536876 PCDHAC2Q9Y5I4 1007 aa22.54■■□□□ 1.2
LTBR-206ENST00000536876 AOX1Q06278 1338 aa22.54■■□□□ 1.2
LTBR-206ENST00000536876 ITGA6P23229 1130 aa22.53■■□□□ 1.2
LTBR-206ENST00000536876 APOBEC3FQ8IUX4 373 aaKnown RBP22.53■■□□□ 1.2
LTBR-206ENST00000536876 SNAP23O00161 211 aa22.52■■□□□ 1.2
LTBR-206ENST00000536876 GCKRQ14397 625 aa22.52■■□□□ 1.2
LTBR-206ENST00000536876 SPRYD7Q5W111 196 aa22.52■■□□□ 1.2
LTBR-206ENST00000536876 TTLL5Q6EMB2 1281 aa22.52■■□□□ 1.2
LTBR-206ENST00000536876 FBXO46Q6PJ61 603 aaPredicted RBP22.52■■□□□ 1.2
LTBR-206ENST00000536876 CSF1RP07333 972 aa22.51■■□□□ 1.19
LTBR-206ENST00000536876 NF2P35240 595 aa22.51■■□□□ 1.19
LTBR-206ENST00000536876 IGHMBP2P38935 993 aaKnown RBP22.51■■□□□ 1.19
LTBR-206ENST00000536876 GTF2IP78347 998 aa22.51■■□□□ 1.19
LTBR-206ENST00000536876 NEXNQ0ZGT2 675 aa22.51■■□□□ 1.19
LTBR-206ENST00000536876 SREBF2Q12772 1141 aa22.51■■□□□ 1.19
LTBR-206ENST00000536876 CHRNDQ07001 517 aa22.5■■□□□ 1.19
LTBR-206ENST00000536876 CD209Q9NNX6 404 aa22.5■■□□□ 1.19
LTBR-206ENST00000536876 ANGEL1Q9UNK9 670 aaKnown RBP22.5■■□□□ 1.19
LTBR-206ENST00000536876 FKTNO75072 461 aa22.49■■□□□ 1.19
LTBR-206ENST00000536876 MMP14P50281 582 aa22.49■■□□□ 1.19
LTBR-206ENST00000536876 ARMC9Q7Z3E5 817 aa22.49■■□□□ 1.19
LTBR-206ENST00000536876 CLMNQ96JQ2 1002 aa22.49■■□□□ 1.19
LTBR-206ENST00000536876 MAP3K11Q16584 847 aa22.48■■□□□ 1.19
LTBR-206ENST00000536876 TWISTNBQ3B726 338 aaPredicted RBP22.48■■□□□ 1.19
LTBR-206ENST00000536876 CCDC184Q52MB2 194 aa22.48■■□□□ 1.19
LTBR-206ENST00000536876 STK31Q9BXU1 1019 aa22.48■■□□□ 1.19
LTBR-206ENST00000536876 ANKRD2Q9GZV1 360 aa22.48■■□□□ 1.19
LTBR-206ENST00000536876 IGF2BP3O00425 579 aaKnown RBP eCLIP22.47■■□□□ 1.19
LTBR-206ENST00000536876 FLIIQ13045 1269 aa22.47■■□□□ 1.19
LTBR-206ENST00000536876 MTMR14Q8NCE2 650 aa22.47■■□□□ 1.19
LTBR-206ENST00000536876 CHMP4AQ9BY43 222 aa22.47■■□□□ 1.19
LTBR-206ENST00000536876 DEFB129Q9H1M3 183 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms