RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 EPS15P42566 896 aa14.03□□□□□ -0.16
CHRNB1-202ENST00000536404 MAP1SQ66K74 1059 aaPredicted RBP14.03□□□□□ -0.16
CHRNB1-202ENST00000536404 INTS3Q68E01 1043 aaKnown RBP14.03□□□□□ -0.16
CHRNB1-202ENST00000536404 RIC3Q7Z5B4 369 aa14.03□□□□□ -0.16
CHRNB1-202ENST00000536404 LTBP1Q14766 1721 aa14.02□□□□□ -0.16
CHRNB1-202ENST00000536404 SCNN1DP51172 638 aa14.02□□□□□ -0.16
CHRNB1-202ENST00000536404 PNMA8AQ86V59 439 aaPredicted RBP14.02□□□□□ -0.16
CHRNB1-202ENST00000536404 CNTROBQ8N137 903 aa14.02□□□□□ -0.16
CHRNB1-202ENST00000536404 SUPT20HQ8NEM7 779 aa14.02□□□□□ -0.16
CHRNB1-202ENST00000536404 VPS33BQ9H267 617 aa14.02□□□□□ -0.16
CHRNB1-202ENST00000536404 ADAMTSL1Q8N6G6 1762 aa14.02□□□□□ -0.17
CHRNB1-202ENST00000536404 KIF20AO95235 890 aa14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 LMOD1P29536 600 aaPredicted RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 NASPP49321 788 aaPredicted RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 CXCL9Q07325 125 aa14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 TRIM28Q13263 835 aaKnown RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 SF3B3Q15393 1217 aaKnown RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 COL13A1Q5TAT6 717 aaPredicted RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 TSPYL6Q8N831 410 aa14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 CELF1Q92879 486 aaKnown RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 ZNRF3Q9ULT6 936 aa14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 DDX49Q9Y6V7 483 aaKnown RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 DDX60Q8IY21 1712 aaKnown RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 IRS4O14654 1257 aaPredicted RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 ST18O60284 1047 aa14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 HSPA1AP0DMV8 641 aaKnown RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 HSPA1BP0DMV9 641 aaKnown RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 ZNF445P59923 1031 aa14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 TWISTNBQ3B726 338 aaPredicted RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 KIAA1211Q6ZU35 1233 aa14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 RPAP2Q8IXW5 612 aaPredicted RBP14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 MYD88Q99836 296 aa14.01□□□□□ -0.17
CHRNB1-202ENST00000536404 TMEM88BA6NKF7 163 aa14□□□□□ -0.17
CHRNB1-202ENST00000536404 BAG4O95429 457 aaKnown RBP14□□□□□ -0.17
CHRNB1-202ENST00000536404 DMTNQ08495 405 aa14□□□□□ -0.17
CHRNB1-202ENST00000536404 ZSCAN30Q86W11 494 aa14□□□□□ -0.17
CHRNB1-202ENST00000536404 JARID2Q92833 1246 aaPredicted RBP14□□□□□ -0.17
CHRNB1-202ENST00000536404 DCTPP1Q9H773 170 aa14□□□□□ -0.17
CHRNB1-202ENST00000536404 COL4A1P02462 1669 aa13.99□□□□□ -0.17
CHRNB1-202ENST00000536404 RAD17O75943 681 aa13.99□□□□□ -0.17
CHRNB1-202ENST00000536404 REC8O95072 547 aa13.99□□□□□ -0.17
CHRNB1-202ENST00000536404 MSNP26038 577 aaKnown RBP13.99□□□□□ -0.17
CHRNB1-202ENST00000536404 FMR1Q06787 632 aaKnown RBP eCLIP13.99□□□□□ -0.17
CHRNB1-202ENST00000536404 KIAA2012Q0VF49 1180 aa13.99□□□□□ -0.17
CHRNB1-202ENST00000536404 TTC22Q5TAA0 569 aa13.99□□□□□ -0.17
CHRNB1-202ENST00000536404 GTPBP4Q9BZE4 634 aaKnown RBP13.99□□□□□ -0.17
CHRNB1-202ENST00000536404 CNTNAP1P78357 1384 aa13.98□□□□□ -0.17
CHRNB1-202ENST00000536404 OFD1O75665 1012 aa13.98□□□□□ -0.17
CHRNB1-202ENST00000536404 GMPSP49915 693 aaPredicted RBP13.98□□□□□ -0.17
CHRNB1-202ENST00000536404 ZBTB38Q8NAP3 1195 aaPredicted RBP13.98□□□□□ -0.17
CHRNB1-202ENST00000536404 YDJCA8MPS7 323 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 GPSM2P81274 684 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 CCDC30Q5VVM6 783 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 CIAPIN1Q6FI81 312 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 TMC4Q7Z404 712 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 GPRC5DQ9NZD1 345 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 NSFL1CQ9UNZ2 370 aaKnown RBP13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 DUOX1Q9NRD9 1551 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 MCM2P49736 904 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 VEGFBP49765 207 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 USP50Q70EL3 339 aaPredicted RBP13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 PLEKHM2Q8IWE5 1019 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 METTL22Q9BUU2 404 aaPredicted RBP13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 SEC31BQ9NQW1 1179 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 POLLQ9UGP5 575 aa13.97□□□□□ -0.17
CHRNB1-202ENST00000536404 PTPRCP08575 1304 aa13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 RIMBP2O15034 1052 aa13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 HMMRO75330 724 aa13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 PCCAP05165 728 aaPredicted RBP13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 RPS8P62241 208 aaKnown RBP13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 GAS2L3Q86XJ1 694 aa13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 ANKRD44Q8N8A2 993 aa13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 CCDC191Q8NCU4 936 aa13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 GPR101Q96P66 508 aaPredicted RBP13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 ADARB2Q9NS39 739 aaKnown RBP13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 MAP3K2Q9Y2U5 619 aa13.96□□□□□ -0.17
CHRNB1-202ENST00000536404 SHTN1A0MZ66 631 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 C6orf229H3BNL8 230 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 TRAF5O00463 557 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 LETM1O95202 739 aaPredicted RBP13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 DDX58O95786 925 aaKnown RBP13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 MCM5P33992 734 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 TNIP1Q15025 636 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 WASHC4Q2M389 1173 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 SIRT2Q8IXJ6 389 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 USP26Q9BXU7 913 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 CWC25Q9NXE8 425 aaPredicted RBP13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 LRRC37AA6NMS7 1700 aa13.95□□□□□ -0.18
CHRNB1-202ENST00000536404 PI4KAP2A4QPH2 592 aa13.94□□□□□ -0.18
CHRNB1-202ENST00000536404 DYNC1I1O14576 645 aa13.94□□□□□ -0.18
CHRNB1-202ENST00000536404 CYP2E1P05181 493 aaPredicted RBP13.94□□□□□ -0.18
CHRNB1-202ENST00000536404 DEFB115Q30KQ5 88 aa13.94□□□□□ -0.18
CHRNB1-202ENST00000536404 KSR2Q6VAB6 950 aa13.94□□□□□ -0.18
CHRNB1-202ENST00000536404 G2E3Q7L622 706 aa13.94□□□□□ -0.18
CHRNB1-202ENST00000536404 PI4KAP1Q8N8J0 262 aa13.94□□□□□ -0.18
CHRNB1-202ENST00000536404 DBNDD1Q9H9R9 158 aa13.94□□□□□ -0.18
CHRNB1-202ENST00000536404 PDE8AO60658 829 aa13.93□□□□□ -0.18
CHRNB1-202ENST00000536404 MBD3O95983 291 aa13.93□□□□□ -0.18
CHRNB1-202ENST00000536404 IGKV5-2P06315 115 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms