RNA–Protein interactions for RNA: ENST00000536172.5

LMO3-213, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-213ENST00000536172 C8orf58Q8NAV2 365 aa14.26□□□□□ -0.13
LMO3-213ENST00000536172 STK31Q9BXU1 1019 aa14.26□□□□□ -0.13
LMO3-213ENST00000536172 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
LMO3-213ENST00000536172 TRPA1O75762 1119 aa14.25□□□□□ -0.13
LMO3-213ENST00000536172 SLC34A2O95436 690 aa14.25□□□□□ -0.13
LMO3-213ENST00000536172 TTLL11Q8NHH1 800 aa14.25□□□□□ -0.13
LMO3-213ENST00000536172 CSRNP1Q96S65 589 aa14.25□□□□□ -0.13
LMO3-213ENST00000536172 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
LMO3-213ENST00000536172 ANP32CO43423 234 aa14.24□□□□□ -0.13
LMO3-213ENST00000536172 STRIP1Q5VSL9 837 aa14.24□□□□□ -0.13
LMO3-213ENST00000536172 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
LMO3-213ENST00000536172 CCDC85AQ96PX6 553 aaPredicted RBP14.24□□□□□ -0.13
LMO3-213ENST00000536172 COA1Q9GZY4 146 aa14.24□□□□□ -0.13
LMO3-213ENST00000536172 MINPP1Q9UNW1 487 aa14.24□□□□□ -0.13
LMO3-213ENST00000536172 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
LMO3-213ENST00000536172 ASTN2O75129 1339 aaPredicted RBP14.23□□□□□ -0.13
LMO3-213ENST00000536172 ZNF646O15015 1829 aaPredicted RBP14.23□□□□□ -0.13
LMO3-213ENST00000536172 NF2P35240 595 aa14.23□□□□□ -0.13
LMO3-213ENST00000536172 CCT4P50991 539 aaKnown RBP14.23□□□□□ -0.13
LMO3-213ENST00000536172 RASAL3Q86YV0 1011 aa14.23□□□□□ -0.13
LMO3-213ENST00000536172 IGKV5-2P06315 115 aa14.22□□□□□ -0.13
LMO3-213ENST00000536172 IGHMBP2P38935 993 aaKnown RBP14.22□□□□□ -0.13
LMO3-213ENST00000536172 PKN2Q16513 984 aaKnown RBP14.22□□□□□ -0.13
LMO3-213ENST00000536172 CCDC27Q2M243 656 aa14.22□□□□□ -0.13
LMO3-213ENST00000536172 DACT2Q5SW24 774 aa14.22□□□□□ -0.13
LMO3-213ENST00000536172 CTU1Q7Z7A3 348 aaKnown RBP14.22□□□□□ -0.13
LMO3-213ENST00000536172 JARID2Q92833 1246 aaPredicted RBP14.22□□□□□ -0.13
LMO3-213ENST00000536172 ANKRD2Q9GZV1 360 aa14.22□□□□□ -0.13
LMO3-213ENST00000536172 GREM2Q9H772 168 aa14.22□□□□□ -0.13
LMO3-213ENST00000536172 NEURL1BA8MQ27 555 aa14.21□□□□□ -0.13
LMO3-213ENST00000536172 PLA2G12BQ9BX93 195 aa14.21□□□□□ -0.13
LMO3-213ENST00000536172 H7C1W4 665 aa14.2□□□□□ -0.14
LMO3-213ENST00000536172 NOM1Q5C9Z4 860 aaKnown RBP14.2□□□□□ -0.14
LMO3-213ENST00000536172 TSPYL6Q8N831 410 aa14.2□□□□□ -0.14
LMO3-213ENST00000536172 MYH16Q9H6N6 1097 aa14.2□□□□□ -0.14
LMO3-213ENST00000536172 HDAC9Q9UKV0 1011 aa14.2□□□□□ -0.14
LMO3-213ENST00000536172 IL16Q14005 1332 aa14.19□□□□□ -0.14
LMO3-213ENST00000536172 WNT10BO00744 389 aa14.19□□□□□ -0.14
LMO3-213ENST00000536172 TM4SF4P48230 202 aa14.19□□□□□ -0.14
LMO3-213ENST00000536172 CWF19L2Q2TBE0 894 aaKnown RBP14.19□□□□□ -0.14
LMO3-213ENST00000536172 TWISTNBQ3B726 338 aaPredicted RBP14.19□□□□□ -0.14
LMO3-213ENST00000536172 NBPF9Q3BBW0 867 aa14.19□□□□□ -0.14
LMO3-213ENST00000536172 TTLL5Q6EMB2 1281 aa14.19□□□□□ -0.14
LMO3-213ENST00000536172 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
LMO3-213ENST00000536172 APOBEC3FQ8IUX4 373 aaKnown RBP14.19□□□□□ -0.14
LMO3-213ENST00000536172 MPHOSPH8Q99549 860 aa14.19□□□□□ -0.14
LMO3-213ENST00000536172 ECM29Q5VYK3 1845 aa14.19□□□□□ -0.14
LMO3-213ENST00000536172 COL1A1P02452 1464 aaPredicted RBP14.18□□□□□ -0.14
LMO3-213ENST00000536172 ZNF804BA4D1E1 1349 aa14.18□□□□□ -0.14
LMO3-213ENST00000536172 SLC4A2P04920 1241 aa14.18□□□□□ -0.14
LMO3-213ENST00000536172 SREBF2Q12772 1141 aa14.18□□□□□ -0.14
LMO3-213ENST00000536172 TTLL12Q14166 644 aaPredicted RBP14.18□□□□□ -0.14
LMO3-213ENST00000536172 GCKRQ14397 625 aa14.18□□□□□ -0.14
LMO3-213ENST00000536172 ARMC9Q7Z3E5 817 aa14.18□□□□□ -0.14
LMO3-213ENST00000536172 FBXW7Q969H0 707 aa14.18□□□□□ -0.14
LMO3-213ENST00000536172 UBE2Q2LH0YL09 131 aa14.17□□□□□ -0.14
LMO3-213ENST00000536172 CSF1RP07333 972 aa14.17□□□□□ -0.14
LMO3-213ENST00000536172 ITGA6P23229 1130 aa14.17□□□□□ -0.14
LMO3-213ENST00000536172 WWC1Q8IX03 1113 aa14.17□□□□□ -0.14
LMO3-213ENST00000536172 LINS1Q8NG48 757 aa14.17□□□□□ -0.14
LMO3-213ENST00000536172 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
LMO3-213ENST00000536172 WTIPA6NIX2 430 aaPredicted RBP14.16□□□□□ -0.14
LMO3-213ENST00000536172 KCNJ4P48050 445 aa14.16□□□□□ -0.14
LMO3-213ENST00000536172 CFHR5Q9BXR6 569 aa14.16□□□□□ -0.14
LMO3-213ENST00000536172 PDE4DIPQ5VU43 2346 aa14.16□□□□□ -0.14
LMO3-213ENST00000536172 TNRC18O15417 2968 aaPredicted RBP14.15□□□□□ -0.14
LMO3-213ENST00000536172 LAMB1P07942 1786 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 UNCXA6NJT0 531 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 ALDH1A1P00352 501 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 HOXD11P31277 338 aaPredicted RBP14.15□□□□□ -0.14
LMO3-213ENST00000536172 INHBEP58166 350 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 FLIIQ13045 1269 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 FKBP5Q13451 457 aaPredicted RBP14.15□□□□□ -0.14
LMO3-213ENST00000536172 C15orf52Q6ZUT6 534 aaKnown RBP14.15□□□□□ -0.14
LMO3-213ENST00000536172 MOB2Q70IA6 237 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 TXNRD3Q86VQ6 643 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 DNAAF4Q8WXU2 420 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 PCDH10Q9P2E7 1040 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 PPP2R3BQ9Y5P8 575 aa14.15□□□□□ -0.14
LMO3-213ENST00000536172 ANKRD18BA2A2Z9 1011 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 CASP7P55210 303 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 GTF2IP78347 998 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 CHRNDQ07001 517 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 PRAMEF18Q5VWM3 479 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 G2E3Q7L622 706 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 KIAA0825Q8IV33 1275 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 MTMR14Q8NCE2 650 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 ZNF296Q8WUU4 475 aaPredicted RBP14.14□□□□□ -0.15
LMO3-213ENST00000536172 ZBED3Q96IU2 234 aaPredicted RBP14.14□□□□□ -0.15
LMO3-213ENST00000536172 MXD3Q9BW11 206 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 CD209Q9NNX6 404 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 HPS5Q9UPZ3 1129 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 A0A1B0GUL6 1792 aa14.14□□□□□ -0.15
LMO3-213ENST00000536172 GPR25O00155 361 aa14.13□□□□□ -0.15
LMO3-213ENST00000536172 MYO1BO43795 1136 aa14.13□□□□□ -0.15
LMO3-213ENST00000536172 SASH1O94885 1247 aa14.13□□□□□ -0.15
LMO3-213ENST00000536172 TBC1D8O95759 1140 aa14.13□□□□□ -0.15
LMO3-213ENST00000536172 SOX10P56693 466 aa14.13□□□□□ -0.15
LMO3-213ENST00000536172 FKBP1AP62942 108 aaKnown RBP14.13□□□□□ -0.15
LMO3-213ENST00000536172 IFIT5Q13325 482 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms