RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 SP8Q8IXZ3 490 aa27.82■■■□□ 2.04
RBFOX1-206ENST00000535565 TMX4Q9H1E5 349 aaPredicted RBP27.82■■■□□ 2.04
RBFOX1-206ENST00000535565 PAG1Q9NWQ8 432 aa27.82■■■□□ 2.04
RBFOX1-206ENST00000535565 PSDA5PKW4 1024 aaPredicted RBP27.82■■■□□ 2.04
RBFOX1-206ENST00000535565 CHMLP26374 656 aa27.82■■■□□ 2.04
RBFOX1-206ENST00000535565 FSD1Q9BTV5 496 aa27.82■■■□□ 2.04
RBFOX1-206ENST00000535565 ATP6V0A2Q9Y487 856 aa27.82■■■□□ 2.04
RBFOX1-206ENST00000535565 HIP1O00291 1037 aa27.81■■■□□ 2.04
RBFOX1-206ENST00000535565 SEC24BO95487 1268 aa27.81■■■□□ 2.04
RBFOX1-206ENST00000535565 CNKSR1Q969H4 720 aa27.81■■■□□ 2.04
RBFOX1-206ENST00000535565 MYH13Q9UKX3 1938 aa27.8■■■□□ 2.04
RBFOX1-206ENST00000535565 GNL3LQ9NVN8 582 aaKnown RBP27.8■■■□□ 2.04
RBFOX1-206ENST00000535565 NSFL1CQ9UNZ2 370 aaKnown RBP27.8■■■□□ 2.04
RBFOX1-206ENST00000535565 GOLIM4O00461 696 aa27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 CHRNA5P30532 468 aa27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 MFAP1P55081 439 aaKnown RBP27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 GPSM2P81274 684 aa27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 FKBP4Q02790 459 aaKnown RBP eCLIP27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 VPS37DQ86XT2 251 aa27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 DIAPH3Q9NSV4 1193 aa27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 NDUFB9Q9Y6M9 179 aa27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 RFX7Q2KHR2 1363 aa27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 LTBP1Q14766 1721 aa27.79■■■□□ 2.04
RBFOX1-206ENST00000535565 ATP2B4P23634 1241 aa27.78■■■□□ 2.04
RBFOX1-206ENST00000535565 MCAMP43121 646 aa27.78■■■□□ 2.04
RBFOX1-206ENST00000535565 BCAMP50895 628 aa27.78■■■□□ 2.04
RBFOX1-206ENST00000535565 EDC3Q96F86 508 aaKnown RBP27.78■■■□□ 2.04
RBFOX1-206ENST00000535565 PODXL2Q9NZ53 605 aa27.78■■■□□ 2.04
RBFOX1-206ENST00000535565 GGA1Q9UJY5 639 aa27.78■■■□□ 2.04
RBFOX1-206ENST00000535565 SCARF1Q14162 830 aa27.77■■■□□ 2.04
RBFOX1-206ENST00000535565 TICAM2Q86XR7 235 aa27.77■■■□□ 2.04
RBFOX1-206ENST00000535565 SLX4Q8IY92 1834 aa27.77■■■□□ 2.04
RBFOX1-206ENST00000535565 GYG1P46976 350 aa27.77■■■□□ 2.04
RBFOX1-206ENST00000535565 KBTBD3Q8NAB2 608 aa27.77■■■□□ 2.04
RBFOX1-206ENST00000535565 SNRKQ9NRH2 765 aa27.77■■■□□ 2.04
RBFOX1-206ENST00000535565 MYH7P12883 1935 aa27.76■■■□□ 2.03
RBFOX1-206ENST00000535565 WTIPA6NIX2 430 aaPredicted RBP27.76■■■□□ 2.03
RBFOX1-206ENST00000535565 RUFY2Q8WXA3 655 aa27.76■■■□□ 2.03
RBFOX1-206ENST00000535565 RBM19Q9Y4C8 960 aaKnown RBP27.76■■■□□ 2.03
RBFOX1-206ENST00000535565 UFL1O94874 794 aa27.75■■■□□ 2.03
RBFOX1-206ENST00000535565 ZAP70P43403 619 aa27.75■■■□□ 2.03
RBFOX1-206ENST00000535565 TTF1Q15361 905 aaPredicted RBP27.75■■■□□ 2.03
RBFOX1-206ENST00000535565 PRPF40BQ6NWY9 871 aaKnown RBP27.75■■■□□ 2.03
RBFOX1-206ENST00000535565 FAM84BQ96KN1 310 aaPredicted RBP27.75■■■□□ 2.03
RBFOX1-206ENST00000535565 ESYT1Q9BSJ8 1104 aa27.75■■■□□ 2.03
RBFOX1-206ENST00000535565 LRRFIP1Q32MZ4 808 aaKnown RBP27.74■■■□□ 2.03
RBFOX1-206ENST00000535565 SLC51AQ86UW1 340 aa27.74■■■□□ 2.03
RBFOX1-206ENST00000535565 SPATA5Q8NB90 893 aa27.74■■■□□ 2.03
RBFOX1-206ENST00000535565 REC8O95072 547 aa27.73■■■□□ 2.03
RBFOX1-206ENST00000535565 HIBADHP31937 336 aaKnown RBP27.73■■■□□ 2.03
RBFOX1-206ENST00000535565 RASGRF1Q13972 1273 aa27.73■■■□□ 2.03
RBFOX1-206ENST00000535565 C15orf52Q6ZUT6 534 aaKnown RBP27.73■■■□□ 2.03
RBFOX1-206ENST00000535565 FBXO33Q7Z6M2 555 aa27.73■■■□□ 2.03
RBFOX1-206ENST00000535565 HMG20BQ9P0W2 317 aa27.73■■■□□ 2.03
RBFOX1-206ENST00000535565 KLRK1P26718 216 aa27.73■■■□□ 2.03
RBFOX1-206ENST00000535565 PI16Q6UXB8 463 aa27.73■■■□□ 2.03
RBFOX1-206ENST00000535565 TGFB2P61812 414 aa27.72■■■□□ 2.03
RBFOX1-206ENST00000535565 MPNDQ8N594 471 aa27.72■■■□□ 2.03
RBFOX1-206ENST00000535565 IRS2Q9Y4H2 1338 aa27.72■■■□□ 2.03
RBFOX1-206ENST00000535565 KIAA1551Q9HCM1 1747 aa27.72■■■□□ 2.03
RBFOX1-206ENST00000535565 DOCK2Q92608 1830 aa27.71■■■□□ 2.03
RBFOX1-206ENST00000535565 SEMA3EO15041 775 aa27.71■■■□□ 2.03
RBFOX1-206ENST00000535565 CWC27Q6UX04 472 aaKnown RBP27.71■■■□□ 2.03
RBFOX1-206ENST00000535565 TBC1D16Q8TBP0 767 aa27.71■■■□□ 2.03
RBFOX1-206ENST00000535565 SGIP1Q9BQI5 828 aa27.71■■■□□ 2.03
RBFOX1-206ENST00000535565 ANTXR1Q9H6X2 564 aa27.71■■■□□ 2.03
RBFOX1-206ENST00000535565 C6orf229H3BNL8 230 aa27.7■■■□□ 2.03
RBFOX1-206ENST00000535565 DPP8Q6V1X1 898 aaPredicted RBP27.7■■■□□ 2.03
RBFOX1-206ENST00000535565 ZNF804AQ7Z570 1209 aa27.7■■■□□ 2.03
RBFOX1-206ENST00000535565 DENND2AQ9ULE3 1009 aa27.7■■■□□ 2.03
RBFOX1-206ENST00000535565 MYO5AQ9Y4I1 1855 aaKnown RBP27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 FRAT2O75474 233 aaPredicted RBP27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 CYP2E1P05181 493 aaPredicted RBP27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 DPEP1P16444 411 aa27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 TTLL6Q8N841 843 aa27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 POLLQ9UGP5 575 aa27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 MED23Q9ULK4 1368 aa27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 SGSM2O43147 1006 aa27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 CC2D2BQ6DHV5 1058 aa27.69■■■□□ 2.02
RBFOX1-206ENST00000535565 RAD50Q92878 1312 aa27.68■■■□□ 2.02
RBFOX1-206ENST00000535565 DUOX1Q9NRD9 1551 aa27.68■■■□□ 2.02
RBFOX1-206ENST00000535565 A0A0G2JLW4 131 aa27.68■■■□□ 2.02
RBFOX1-206ENST00000535565 ZBTB22O15209 634 aa27.68■■■□□ 2.02
RBFOX1-206ENST00000535565 NMIQ13287 307 aaPredicted RBP27.68■■■□□ 2.02
RBFOX1-206ENST00000535565 TXNRD3Q86VQ6 643 aa27.68■■■□□ 2.02
RBFOX1-206ENST00000535565 IQSEC3Q9UPP2 1182 aaPredicted RBP27.68■■■□□ 2.02
RBFOX1-206ENST00000535565 ZFYP08048 801 aaPredicted RBP27.67■■■□□ 2.02
RBFOX1-206ENST00000535565 PTGER2P43116 358 aa27.67■■■□□ 2.02
RBFOX1-206ENST00000535565 ZSCAN25Q6NSZ9 544 aa27.67■■■□□ 2.02
RBFOX1-206ENST00000535565 C22orf23Q9BZE7 217 aa27.67■■■□□ 2.02
RBFOX1-206ENST00000535565 PDS5AQ29RF7 1337 aaKnown RBP27.67■■■□□ 2.02
RBFOX1-206ENST00000535565 OLFM4Q6UX06 510 aa27.66■■■□□ 2.02
RBFOX1-206ENST00000535565 CD2APQ9Y5K6 639 aa27.66■■■□□ 2.02
RBFOX1-206ENST00000535565 RNF113AO15541 343 aaKnown RBP27.65■■■□□ 2.02
RBFOX1-206ENST00000535565 WASHC4Q2M389 1173 aa27.65■■■□□ 2.02
RBFOX1-206ENST00000535565 FAM227BQ96M60 508 aa27.65■■■□□ 2.02
RBFOX1-206ENST00000535565 TBC1D32Q96NH3 1257 aa27.65■■■□□ 2.02
RBFOX1-206ENST00000535565 GPR101Q96P66 508 aaPredicted RBP27.65■■■□□ 2.02
RBFOX1-206ENST00000535565 ANO2Q9NQ90 1003 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms