RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
CHFR-210ENST00000535527 RTKN2Q8IZC4 609 aa16.4■□□□□ 0.22
CHFR-210ENST00000535527 HACL1Q9UJ83 578 aa16.4■□□□□ 0.22
CHFR-210ENST00000535527 NSFL1CQ9UNZ2 370 aaKnown RBP16.4■□□□□ 0.22
CHFR-210ENST00000535527 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
CHFR-210ENST00000535527 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
CHFR-210ENST00000535527 YDJCA8MPS7 323 aa16.39■□□□□ 0.21
CHFR-210ENST00000535527 IGHMBP2P38935 993 aaKnown RBP16.39■□□□□ 0.21
CHFR-210ENST00000535527 POLA2Q14181 598 aa16.39■□□□□ 0.21
CHFR-210ENST00000535527 EAPPQ56P03 285 aaPredicted RBP16.39■□□□□ 0.21
CHFR-210ENST00000535527 CLEC11AQ9Y240 323 aa16.39■□□□□ 0.21
CHFR-210ENST00000535527 XDHP47989 1333 aa16.39■□□□□ 0.21
CHFR-210ENST00000535527 SRGAP3O43295 1099 aa16.38■□□□□ 0.21
CHFR-210ENST00000535527 UFL1O94874 794 aa16.38■□□□□ 0.21
CHFR-210ENST00000535527 CNTROBQ8N137 903 aa16.38■□□□□ 0.21
CHFR-210ENST00000535527 SIL1Q9H173 461 aa16.38■□□□□ 0.21
CHFR-210ENST00000535527 DDX19BQ9UMR2 479 aa16.38■□□□□ 0.21
CHFR-210ENST00000535527 EPHX2P34913 555 aa16.37■□□□□ 0.21
CHFR-210ENST00000535527 KIAA2012Q0VF49 1180 aa16.37■□□□□ 0.21
CHFR-210ENST00000535527 LDHAL6AQ6ZMR3 332 aa16.37■□□□□ 0.21
CHFR-210ENST00000535527 SSH3Q8TE77 659 aa16.37■□□□□ 0.21
CHFR-210ENST00000535527 COPRSQ9NQ92 184 aa16.37■□□□□ 0.21
CHFR-210ENST00000535527 KCNQ5Q9NR82 932 aa16.37■□□□□ 0.21
CHFR-210ENST00000535527 MYO5AQ9Y4I1 1855 aaKnown RBP16.36■□□□□ 0.21
CHFR-210ENST00000535527 EYA2O00167 538 aa16.36■□□□□ 0.21
CHFR-210ENST00000535527 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
CHFR-210ENST00000535527 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
CHFR-210ENST00000535527 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
CHFR-210ENST00000535527 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
CHFR-210ENST00000535527 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
CHFR-210ENST00000535527 MED23Q9ULK4 1368 aa16.36■□□□□ 0.21
CHFR-210ENST00000535527 COL1A1P02452 1464 aaPredicted RBP16.35■□□□□ 0.21
CHFR-210ENST00000535527 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 TAF7LQ5H9L4 462 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 BEGAINQ9BUH8 593 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 DBNDD1Q9H9R9 158 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 CNNM1Q9NRU3 951 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 GGA1Q9UJY5 639 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 ZNF609O15014 1411 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 AKAP11Q9UKA4 1901 aa16.35■□□□□ 0.21
CHFR-210ENST00000535527 CCDC85CA6NKD9 419 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 C6orf229H3BNL8 230 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 FZD9O00144 591 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 MS4A1P11836 297 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 ECE1P42892 770 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 DOK7Q18PE1 504 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 LARGE2Q8N3Y3 721 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 ABT1Q9ULW3 272 aaKnown RBP16.34■□□□□ 0.21
CHFR-210ENST00000535527 PCDHB15Q9Y5E8 787 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 ZNF804BA4D1E1 1349 aa16.34■□□□□ 0.21
CHFR-210ENST00000535527 SASH1O94885 1247 aa16.33■□□□□ 0.2
CHFR-210ENST00000535527 FGFR2P21802 821 aa16.33■□□□□ 0.2
CHFR-210ENST00000535527 MAP1SQ66K74 1059 aaPredicted RBP16.33■□□□□ 0.2
CHFR-210ENST00000535527 GPC2Q8N158 579 aa16.33■□□□□ 0.2
CHFR-210ENST00000535527 EXOC6Q8TAG9 804 aa16.33■□□□□ 0.2
CHFR-210ENST00000535527 CIAO1O76071 339 aa16.32■□□□□ 0.2
CHFR-210ENST00000535527 ATP2B4P23634 1241 aa16.32■□□□□ 0.2
CHFR-210ENST00000535527 WASHC4Q2M389 1173 aa16.32■□□□□ 0.2
CHFR-210ENST00000535527 GRIPAP1Q4V328 841 aa16.32■□□□□ 0.2
CHFR-210ENST00000535527 SHTN1A0MZ66 631 aa16.31■□□□□ 0.2
CHFR-210ENST00000535527 ECE2O60344 883 aa16.31■□□□□ 0.2
CHFR-210ENST00000535527 METTL24Q5JXM2 366 aa16.31■□□□□ 0.2
CHFR-210ENST00000535527 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
CHFR-210ENST00000535527 ANKRD2Q9GZV1 360 aa16.31■□□□□ 0.2
CHFR-210ENST00000535527 LEMD3Q9Y2U8 911 aa16.31■□□□□ 0.2
CHFR-210ENST00000535527 MROH5Q6ZUA9 1318 aa16.3■□□□□ 0.2
CHFR-210ENST00000535527 PDE8BO95263 885 aa16.3■□□□□ 0.2
CHFR-210ENST00000535527 ADORA1P30542 326 aa16.3■□□□□ 0.2
CHFR-210ENST00000535527 CXCL9Q07325 125 aa16.3■□□□□ 0.2
CHFR-210ENST00000535527 TFCP2Q12800 502 aa16.3■□□□□ 0.2
CHFR-210ENST00000535527 C15orf52Q6ZUT6 534 aaKnown RBP16.3■□□□□ 0.2
CHFR-210ENST00000535527 CAPNS2Q96L46 248 aa16.3■□□□□ 0.2
CHFR-210ENST00000535527 EXOC6BQ9Y2D4 811 aa16.3■□□□□ 0.2
CHFR-210ENST00000535527 RAD17O75943 681 aa16.29■□□□□ 0.2
CHFR-210ENST00000535527 MAP2K2P36507 400 aa16.29■□□□□ 0.2
CHFR-210ENST00000535527 GYG1P46976 350 aa16.29■□□□□ 0.2
CHFR-210ENST00000535527 NIM1KQ8IY84 436 aa16.29■□□□□ 0.2
CHFR-210ENST00000535527 JDP2Q8WYK2 163 aa16.29■□□□□ 0.2
CHFR-210ENST00000535527 MXD3Q9BW11 206 aa16.29■□□□□ 0.2
CHFR-210ENST00000535527 NOP58Q9Y2X3 529 aaKnown RBP16.29■□□□□ 0.2
CHFR-210ENST00000535527 THSD7BQ9C0I4 1608 aa16.29■□□□□ 0.2
CHFR-210ENST00000535527 CA12O43570 354 aa16.28■□□□□ 0.2
CHFR-210ENST00000535527 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
CHFR-210ENST00000535527 ECM29Q5VYK3 1845 aa16.27■□□□□ 0.2
CHFR-210ENST00000535527 LMOD1P29536 600 aaPredicted RBP16.27■□□□□ 0.2
CHFR-210ENST00000535527 IL15P40933 162 aaPredicted RBP16.27■□□□□ 0.2
CHFR-210ENST00000535527 SCNN1DP51172 638 aa16.27■□□□□ 0.2
CHFR-210ENST00000535527 EIF6P56537 245 aaKnown RBP16.27■□□□□ 0.2
CHFR-210ENST00000535527 UBE4AQ14139 1066 aa16.27■□□□□ 0.2
CHFR-210ENST00000535527 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
CHFR-210ENST00000535527 EYA3Q99504 573 aa16.27■□□□□ 0.2
CHFR-210ENST00000535527 TMX4Q9H1E5 349 aaPredicted RBP16.27■□□□□ 0.2
CHFR-210ENST00000535527 VPS33BQ9H267 617 aa16.27■□□□□ 0.2
CHFR-210ENST00000535527 FBXO3Q9UK99 471 aa16.27■□□□□ 0.2
CHFR-210ENST00000535527 HDAC5Q9UQL6 1122 aa16.27■□□□□ 0.2
CHFR-210ENST00000535527 DOCK2Q92608 1830 aa16.26■□□□□ 0.19
CHFR-210ENST00000535527 PSMD14O00487 310 aa16.26■□□□□ 0.19
CHFR-210ENST00000535527 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
CHFR-210ENST00000535527 ZC3H12CQ9C0D7 883 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms