RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 KLHDC4Q8TBB5 520 aa27.19■■□□□ 1.94
SSPN-204ENST00000535504 GPRC5DQ9NZD1 345 aa27.19■■□□□ 1.94
SSPN-204ENST00000535504 SCNN1DP51172 638 aa27.18■■□□□ 1.94
SSPN-204ENST00000535504 LRRC24Q50LG9 513 aa27.18■■□□□ 1.94
SSPN-204ENST00000535504 C15orf52Q6ZUT6 534 aaKnown RBP27.18■■□□□ 1.94
SSPN-204ENST00000535504 PANK1Q8TE04 598 aa27.18■■□□□ 1.94
SSPN-204ENST00000535504 DPF2Q92785 391 aa27.18■■□□□ 1.94
SSPN-204ENST00000535504 SIL1Q9H173 461 aa27.18■■□□□ 1.94
SSPN-204ENST00000535504 ADARB2Q9NS39 739 aaKnown RBP27.18■■□□□ 1.94
SSPN-204ENST00000535504 CIAO1O76071 339 aa27.17■■□□□ 1.94
SSPN-204ENST00000535504 PTPN12Q05209 780 aaKnown RBP27.17■■□□□ 1.94
SSPN-204ENST00000535504 CAVIN4Q5BKX8 364 aa27.17■■□□□ 1.94
SSPN-204ENST00000535504 DDX19BQ9UMR2 479 aa27.17■■□□□ 1.94
SSPN-204ENST00000535504 IFIT1P09914 478 aaKnown RBP27.16■■□□□ 1.94
SSPN-204ENST00000535504 RLBP1P12271 317 aa27.16■■□□□ 1.94
SSPN-204ENST00000535504 IL15P40933 162 aaPredicted RBP27.16■■□□□ 1.94
SSPN-204ENST00000535504 RFX5P48382 616 aaPredicted RBP27.16■■□□□ 1.94
SSPN-204ENST00000535504 MTX1Q13505 466 aa27.16■■□□□ 1.94
SSPN-204ENST00000535504 CHADLQ6NUI6 762 aa27.16■■□□□ 1.94
SSPN-204ENST00000535504 USP50Q70EL3 339 aaPredicted RBP27.16■■□□□ 1.94
SSPN-204ENST00000535504 CEP126Q9P2H0 1117 aa27.16■■□□□ 1.94
SSPN-204ENST00000535504 MYO3BQ8WXR4 1341 aa27.16■■□□□ 1.94
SSPN-204ENST00000535504 PDE8BO95263 885 aa27.15■■□□□ 1.94
SSPN-204ENST00000535504 VIL1P09327 827 aaKnown RBP27.15■■□□□ 1.94
SSPN-204ENST00000535504 EPS15P42566 896 aa27.15■■□□□ 1.94
SSPN-204ENST00000535504 PUM3Q15397 648 aaKnown RBP27.15■■□□□ 1.94
SSPN-204ENST00000535504 AGBL3Q8NEM8 1001 aa27.15■■□□□ 1.94
SSPN-204ENST00000535504 CNOT7Q9UIV1 285 aaKnown RBP27.15■■□□□ 1.94
SSPN-204ENST00000535504 A0A1B0GUL6 1792 aa27.14■■□□□ 1.94
SSPN-204ENST00000535504 SLC5A1P13866 664 aa27.14■■□□□ 1.94
SSPN-204ENST00000535504 MVPQ14764 893 aaKnown RBP27.14■■□□□ 1.94
SSPN-204ENST00000535504 RSBN1LQ6PCB5 846 aaPredicted RBP27.14■■□□□ 1.94
SSPN-204ENST00000535504 CD209Q9NNX6 404 aa27.14■■□□□ 1.94
SSPN-204ENST00000535504 COPRSQ9NQ92 184 aa27.14■■□□□ 1.94
SSPN-204ENST00000535504 ZBTB12Q9Y330 459 aaPredicted RBP27.14■■□□□ 1.94
SSPN-204ENST00000535504 WTIPA6NIX2 430 aaPredicted RBP27.13■■□□□ 1.93
SSPN-204ENST00000535504 PDE3AQ14432 1141 aa27.13■■□□□ 1.93
SSPN-204ENST00000535504 STRIP1Q5VSL9 837 aa27.13■■□□□ 1.93
SSPN-204ENST00000535504 TTLL5Q6EMB2 1281 aa27.13■■□□□ 1.93
SSPN-204ENST00000535504 TXNRD3Q86VQ6 643 aa27.13■■□□□ 1.93
SSPN-204ENST00000535504 MICALL2Q8IY33 904 aa27.13■■□□□ 1.93
SSPN-204ENST00000535504 ZBTB7BO15156 539 aaPredicted RBP27.12■■□□□ 1.93
SSPN-204ENST00000535504 FRAT2O75474 233 aaPredicted RBP27.12■■□□□ 1.93
SSPN-204ENST00000535504 KLRK1P26718 216 aa27.12■■□□□ 1.93
SSPN-204ENST00000535504 HIBADHP31937 336 aaKnown RBP27.12■■□□□ 1.93
SSPN-204ENST00000535504 KCNQ5Q9NR82 932 aa27.12■■□□□ 1.93
SSPN-204ENST00000535504 SNAP23O00161 211 aa27.11■■□□□ 1.93
SSPN-204ENST00000535504 G3BP1Q13283 466 aaKnown RBP eCLIP27.11■■□□□ 1.93
SSPN-204ENST00000535504 OGFOD1Q8N543 542 aa27.11■■□□□ 1.93
SSPN-204ENST00000535504 HSPA6P17066 643 aa27.1■■□□□ 1.93
SSPN-204ENST00000535504 OS9Q13438 667 aaPredicted RBP27.1■■□□□ 1.93
SSPN-204ENST00000535504 LPIN2Q92539 896 aa27.1■■□□□ 1.93
SSPN-204ENST00000535504 HDAC9Q9UKV0 1011 aa27.1■■□□□ 1.93
SSPN-204ENST00000535504 PA2G4Q9UQ80 394 aaKnown RBP27.1■■□□□ 1.93
SSPN-204ENST00000535504 COG6Q9Y2V7 657 aa27.1■■□□□ 1.93
SSPN-204ENST00000535504 MMP14P50281 582 aa27.09■■□□□ 1.93
SSPN-204ENST00000535504 GTF2IP78347 998 aa27.09■■□□□ 1.93
SSPN-204ENST00000535504 C1orf115Q9H7X2 142 aa27.09■■□□□ 1.93
SSPN-204ENST00000535504 AKAP2Q9Y2D5 859 aa27.09■■□□□ 1.93
SSPN-204ENST00000535504 SCN9AQ15858 1988 aa27.09■■□□□ 1.93
SSPN-204ENST00000535504 IL1R1P14778 569 aa27.08■■□□□ 1.93
SSPN-204ENST00000535504 PSME4Q14997 1843 aa27.08■■□□□ 1.93
SSPN-204ENST00000535504 USP17L8P0C7I0 530 aa27.07■■□□□ 1.92
SSPN-204ENST00000535504 GYG1P46976 350 aa27.07■■□□□ 1.92
SSPN-204ENST00000535504 ATP8B2P98198 1209 aa27.07■■□□□ 1.92
SSPN-204ENST00000535504 ATP2B3Q16720 1220 aa27.07■■□□□ 1.92
SSPN-204ENST00000535504 ATG9AQ7Z3C6 839 aa27.07■■□□□ 1.92
SSPN-204ENST00000535504 VGLL2Q8N8G2 317 aa27.07■■□□□ 1.92
SSPN-204ENST00000535504 ZNF609O15014 1411 aa27.07■■□□□ 1.92
SSPN-204ENST00000535504 APLP1P51693 650 aa27.06■■□□□ 1.92
SSPN-204ENST00000535504 GNL3LQ9NVN8 582 aaKnown RBP27.06■■□□□ 1.92
SSPN-204ENST00000535504 HMMRO75330 724 aa27.05■■□□□ 1.92
SSPN-204ENST00000535504 POTEIP0CG38 1075 aa27.05■■□□□ 1.92
SSPN-204ENST00000535504 POTEJP0CG39 1038 aa27.05■■□□□ 1.92
SSPN-204ENST00000535504 DACT2Q5SW24 774 aa27.05■■□□□ 1.92
SSPN-204ENST00000535504 RBM26Q5T8P6 1007 aaKnown RBP27.05■■□□□ 1.92
SSPN-204ENST00000535504 ZC3H15Q8WU90 426 aaKnown RBP27.05■■□□□ 1.92
SSPN-204ENST00000535504 PNMA6EA0A0J9YXQ4 647 aa27.04■■□□□ 1.92
SSPN-204ENST00000535504 SASH1O94885 1247 aa27.04■■□□□ 1.92
SSPN-204ENST00000535504 KIF4BQ2VIQ3 1234 aa27.04■■□□□ 1.92
SSPN-204ENST00000535504 FAM84BQ96KN1 310 aaPredicted RBP27.04■■□□□ 1.92
SSPN-204ENST00000535504 IRS2Q9Y4H2 1338 aa27.04■■□□□ 1.92
SSPN-204ENST00000535504 TBC1D10BQ4KMP7 808 aaPredicted RBP27.03■■□□□ 1.92
SSPN-204ENST00000535504 CNTROBQ8N137 903 aa27.03■■□□□ 1.92
SSPN-204ENST00000535504 SURF6O75683 361 aaKnown RBP27.02■■□□□ 1.92
SSPN-204ENST00000535504 FKBP1AP62942 108 aaKnown RBP27.02■■□□□ 1.92
SSPN-204ENST00000535504 MAP1SQ66K74 1059 aaPredicted RBP27.02■■□□□ 1.92
SSPN-204ENST00000535504 SAMD7Q7Z3H4 446 aa27.02■■□□□ 1.92
SSPN-204ENST00000535504 TDRD7Q8NHU6 1098 aaKnown RBP27.02■■□□□ 1.92
SSPN-204ENST00000535504 SSH3Q8TE77 659 aa27.02■■□□□ 1.92
SSPN-204ENST00000535504 FGFR2P21802 821 aa27.01■■□□□ 1.91
SSPN-204ENST00000535504 POLA2Q14181 598 aa27.01■■□□□ 1.91
SSPN-204ENST00000535504 FBXO33Q7Z6M2 555 aa27.01■■□□□ 1.91
SSPN-204ENST00000535504 TBC1D22AQ8WUA7 517 aa27.01■■□□□ 1.91
SSPN-204ENST00000535504 ZNF280AP59817 542 aaPredicted RBP27■■□□□ 1.91
SSPN-204ENST00000535504 HSP90AB4PQ58FF6 505 aa27■■□□□ 1.91
SSPN-204ENST00000535504 CEP85Q6P2H3 762 aa27■■□□□ 1.91
SSPN-204ENST00000535504 RPAP2Q8IXW5 612 aaPredicted RBP27■■□□□ 1.91
SSPN-204ENST00000535504 TRPM4Q8TD43 1214 aa27■■□□□ 1.91
SSPN-204ENST00000535504 DCPSQ96C86 337 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms