RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 TMEM265A0A087WTH1 108 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 BTBD11A6QL63 1104 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 GNAT3A8MTJ3 354 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 WNT10BO00744 389 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 MMP14P50281 582 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 LACTBP83111 547 aaPredicted RBP10.19□□□□□ -0.78
CPSF7-214ENST00000535222 DOK7Q18PE1 504 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 EYA3Q99504 573 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 CDX2Q99626 313 aaPredicted RBP10.19□□□□□ -0.78
CPSF7-214ENST00000535222 RNF208Q9H0X6 261 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 ZFYVE28Q9HCC9 887 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 ALPK3Q96L96 1907 aa10.19□□□□□ -0.78
CPSF7-214ENST00000535222 DDX60Q8IY21 1712 aaKnown RBP10.19□□□□□ -0.78
CPSF7-214ENST00000535222 IRS2Q9Y4H2 1338 aa10.18□□□□□ -0.78
CPSF7-214ENST00000535222 GRK4P32298 578 aa10.18□□□□□ -0.78
CPSF7-214ENST00000535222 MAGEA10P43363 369 aaPredicted RBP10.18□□□□□ -0.78
CPSF7-214ENST00000535222 NEUROD1Q13562 356 aa10.18□□□□□ -0.78
CPSF7-214ENST00000535222 CLMNQ96JQ2 1002 aa10.18□□□□□ -0.78
CPSF7-214ENST00000535222 ARHGAP39Q9C0H5 1083 aa10.18□□□□□ -0.78
CPSF7-214ENST00000535222 FAM205AQ6ZU69 1335 aa10.17□□□□□ -0.78
CPSF7-214ENST00000535222 RIMBP2O15034 1052 aa10.17□□□□□ -0.78
CPSF7-214ENST00000535222 TLR2O60603 784 aa10.17□□□□□ -0.78
CPSF7-214ENST00000535222 GPTP24298 496 aa10.17□□□□□ -0.78
CPSF7-214ENST00000535222 GIGYF2Q6Y7W6 1299 aaKnown RBP10.17□□□□□ -0.78
CPSF7-214ENST00000535222 DDX46Q7L014 1031 aaKnown RBP10.17□□□□□ -0.78
CPSF7-214ENST00000535222 TBC1D16Q8TBP0 767 aa10.17□□□□□ -0.78
CPSF7-214ENST00000535222 CNKSR2Q8WXI2 1034 aa10.17□□□□□ -0.78
CPSF7-214ENST00000535222 SRRDQ9UH36 339 aa10.17□□□□□ -0.78
CPSF7-214ENST00000535222 NSFL1CQ9UNZ2 370 aaKnown RBP10.17□□□□□ -0.78
CPSF7-214ENST00000535222 HELBQ8NG08 1087 aaPredicted RBP10.16□□□□□ -0.78
CPSF7-214ENST00000535222 ZBED3Q96IU2 234 aaPredicted RBP10.16□□□□□ -0.78
CPSF7-214ENST00000535222 UTP14AQ9BVJ6 771 aaKnown RBP10.16□□□□□ -0.78
CPSF7-214ENST00000535222 CRISPLD2Q9H0B8 497 aa10.16□□□□□ -0.78
CPSF7-214ENST00000535222 PODXL2Q9NZ53 605 aa10.16□□□□□ -0.78
CPSF7-214ENST00000535222 RIPOR2Q9Y4F9 1068 aa10.16□□□□□ -0.78
CPSF7-214ENST00000535222 PSME4Q14997 1843 aa10.16□□□□□ -0.78
CPSF7-214ENST00000535222 COL1A1P02452 1464 aaPredicted RBP10.16□□□□□ -0.78
CPSF7-214ENST00000535222 HMOX1P09601 288 aa10.15□□□□□ -0.78
CPSF7-214ENST00000535222 GPSM2P81274 684 aa10.15□□□□□ -0.78
CPSF7-214ENST00000535222 PRKG1Q13976 671 aa10.15□□□□□ -0.78
CPSF7-214ENST00000535222 KIF22Q14807 665 aa10.15□□□□□ -0.78
CPSF7-214ENST00000535222 TAF1CQ15572 869 aaPredicted RBP10.15□□□□□ -0.78
CPSF7-214ENST00000535222 TTLL7Q6ZT98 887 aa10.15□□□□□ -0.78
CPSF7-214ENST00000535222 APOBEC3FQ8IUX4 373 aaKnown RBP10.15□□□□□ -0.78
CPSF7-214ENST00000535222 BRI3BPQ8WY22 251 aa10.15□□□□□ -0.78
CPSF7-214ENST00000535222 TRIM47Q96LD4 638 aa10.15□□□□□ -0.78
CPSF7-214ENST00000535222 ZC3H12CQ9C0D7 883 aaKnown RBP10.15□□□□□ -0.78
CPSF7-214ENST00000535222 SEMA6BQ9H3T3 888 aa10.15□□□□□ -0.78
CPSF7-214ENST00000535222 ZCCHC17Q9NP64 241 aaKnown RBP10.15□□□□□ -0.78
CPSF7-214ENST00000535222 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
CPSF7-214ENST00000535222 PPP1R12BO60237 982 aaPredicted RBP10.14□□□□□ -0.79
CPSF7-214ENST00000535222 CTGFP29279 349 aa10.14□□□□□ -0.79
CPSF7-214ENST00000535222 UBXN2AP68543 259 aa10.14□□□□□ -0.79
CPSF7-214ENST00000535222 GAS2L2Q8NHY3 880 aa10.14□□□□□ -0.79
CPSF7-214ENST00000535222 PAWRQ96IZ0 340 aaKnown RBP10.14□□□□□ -0.79
CPSF7-214ENST00000535222 C1QTNF1Q9BXJ1 281 aa10.14□□□□□ -0.79
CPSF7-214ENST00000535222 UBE2OQ9C0C9 1292 aaKnown RBP10.14□□□□□ -0.79
CPSF7-214ENST00000535222 FZD1Q9UP38 647 aa10.14□□□□□ -0.79
CPSF7-214ENST00000535222 USP17L3A6NCW0 530 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 USP17L4A6NCW7 530 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 HOXD10P28358 340 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 KIF6Q6ZMV9 814 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 USP17L1Q7RTZ2 530 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 PODNQ7Z5L7 613 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 FAM43AQ8N2R8 423 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 FAM161BQ96MY7 647 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 UNC93B1Q9H1C4 597 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 PAK6Q9NQU5 681 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-214ENST00000535222 ZMYND8Q9ULU4 1186 aaPredicted RBP10.13□□□□□ -0.79
CPSF7-214ENST00000535222 PPP2R3BQ9Y5P8 575 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
CPSF7-214ENST00000535222 COL3A1P02461 1466 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-214ENST00000535222 LAMB2P55268 1798 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 USP2O75604 605 aaPredicted RBP10.12□□□□□ -0.79
CPSF7-214ENST00000535222 OSBPP22059 807 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 C17orf99Q6UX52 265 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 NECAB2Q7Z6G3 386 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 ANKRD13AQ8IZ07 590 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 ANKLE1Q8NAG6 615 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 CELF1Q92879 486 aaKnown RBP10.12□□□□□ -0.79
CPSF7-214ENST00000535222 DEFB129Q9H1M3 183 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 XIRP2A4UGR9 3374 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 ZSWIM8A7E2V4 1837 aa10.12□□□□□ -0.79
CPSF7-214ENST00000535222 HCLS1P14317 486 aaPredicted RBP10.11□□□□□ -0.79
CPSF7-214ENST00000535222 GTF2A2P52657 109 aa10.11□□□□□ -0.79
CPSF7-214ENST00000535222 SF3B3Q15393 1217 aaKnown RBP10.11□□□□□ -0.79
CPSF7-214ENST00000535222 C7orf61Q8IZ16 206 aa10.11□□□□□ -0.79
CPSF7-214ENST00000535222 OGFOD1Q8N543 542 aa10.11□□□□□ -0.79
CPSF7-214ENST00000535222 SLAIN1Q8ND83 568 aa10.11□□□□□ -0.79
CPSF7-214ENST00000535222 RAET1EQ8TD07 263 aa10.11□□□□□ -0.79
CPSF7-214ENST00000535222 ZBTB3Q9H5J0 574 aa10.11□□□□□ -0.79
CPSF7-214ENST00000535222 ADGRA2Q96PE1 1338 aa10.1□□□□□ -0.79
CPSF7-214ENST00000535222 TFRCP02786 760 aaKnown RBP10.1□□□□□ -0.79
CPSF7-214ENST00000535222 IREB2P48200 963 aaKnown RBP10.1□□□□□ -0.79
CPSF7-214ENST00000535222 DACT2Q5SW24 774 aa10.1□□□□□ -0.79
CPSF7-214ENST00000535222 ALYREFQ86V81 257 aaKnown RBP10.1□□□□□ -0.79
CPSF7-214ENST00000535222 ATXN2LQ8WWM7 1075 aaKnown RBP10.1□□□□□ -0.79
CPSF7-214ENST00000535222 OPTNQ96CV9 577 aa10.1□□□□□ -0.79
CPSF7-214ENST00000535222 P2RX7Q99572 595 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms