RNA–Protein interactions for RNA: ENST00000534839.1

TNC-209, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-209ENST00000534839 KRT26Q7Z3Y9 468 aa13.9□□□□□ -0.18
TNC-209ENST00000534839 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
TNC-209ENST00000534839 NLRP7Q8WX94 980 aa13.9□□□□□ -0.18
TNC-209ENST00000534839 GOLGA8CPA6NN73 597 aa13.89□□□□□ -0.19
TNC-209ENST00000534839 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
TNC-209ENST00000534839 METTL3Q86U44 580 aaKnown RBP13.89□□□□□ -0.19
TNC-209ENST00000534839 SLC51AQ86UW1 340 aa13.89□□□□□ -0.19
TNC-209ENST00000534839 WNT2BQ93097 391 aa13.89□□□□□ -0.19
TNC-209ENST00000534839 PTPN22Q9Y2R2 807 aa13.89□□□□□ -0.19
TNC-209ENST00000534839 CEP290O15078 2479 aa13.89□□□□□ -0.19
TNC-209ENST00000534839 SLC39A6Q13433 755 aa13.88□□□□□ -0.19
TNC-209ENST00000534839 PLEKHO1Q53GL0 409 aaPredicted RBP13.88□□□□□ -0.19
TNC-209ENST00000534839 Q7L0L9 218 aa13.88□□□□□ -0.19
TNC-209ENST00000534839 DEFB123Q8N688 67 aa13.88□□□□□ -0.19
TNC-209ENST00000534839 BCL2L13Q9BXK5 485 aa13.88□□□□□ -0.19
TNC-209ENST00000534839 LAMA3Q16787 3333 aa13.88□□□□□ -0.19
TNC-209ENST00000534839 WASHC2AQ641Q2 1341 aa13.88□□□□□ -0.19
TNC-209ENST00000534839 MRC1P22897 1456 aa13.87□□□□□ -0.19
TNC-209ENST00000534839 KIAA0100Q14667 2235 aaKnown RBP13.87□□□□□ -0.19
TNC-209ENST00000534839 LAMB4A4D0S4 1761 aa13.87□□□□□ -0.19
TNC-209ENST00000534839 RCCD1A6NED2 376 aa13.87□□□□□ -0.19
TNC-209ENST00000534839 TM4SF4P48230 202 aa13.87□□□□□ -0.19
TNC-209ENST00000534839 DPF3Q92784 378 aa13.87□□□□□ -0.19
TNC-209ENST00000534839 FAM122AQ96E09 287 aa13.87□□□□□ -0.19
TNC-209ENST00000534839 CNOT7Q9UIV1 285 aaKnown RBP13.87□□□□□ -0.19
TNC-209ENST00000534839 CDHR2Q9BYE9 1310 aa13.87□□□□□ -0.19
TNC-209ENST00000534839 A0A1W2PPC1 479 aa13.86□□□□□ -0.19
TNC-209ENST00000534839 PPIP5K2O43314 1243 aa13.86□□□□□ -0.19
TNC-209ENST00000534839 OATP04181 439 aa13.86□□□□□ -0.19
TNC-209ENST00000534839 BCAMP50895 628 aa13.86□□□□□ -0.19
TNC-209ENST00000534839 AOC3Q16853 763 aa13.86□□□□□ -0.19
TNC-209ENST00000534839 CC2D2BQ6DHV5 1058 aa13.86□□□□□ -0.19
TNC-209ENST00000534839 SAMD7Q7Z3H4 446 aa13.86□□□□□ -0.19
TNC-209ENST00000534839 NBPF5PQ86XG9 351 aaPredicted RBP13.86□□□□□ -0.19
TNC-209ENST00000534839 PUS7Q96PZ0 661 aaKnown RBP13.86□□□□□ -0.19
TNC-209ENST00000534839 CFHR5Q9BXR6 569 aa13.86□□□□□ -0.19
TNC-209ENST00000534839 ZNF330Q9Y3S2 320 aaPredicted RBP13.86□□□□□ -0.19
TNC-209ENST00000534839 CAMTA2O94983 1202 aa13.85□□□□□ -0.19
TNC-209ENST00000534839 KRI1Q8N9T8 703 aaKnown RBP13.85□□□□□ -0.19
TNC-209ENST00000534839 ZNRF3Q9ULT6 936 aa13.85□□□□□ -0.19
TNC-209ENST00000534839 WTIPA6NIX2 430 aaPredicted RBP13.84□□□□□ -0.19
TNC-209ENST00000534839 THSD4Q6ZMP0 1018 aa13.84□□□□□ -0.19
TNC-209ENST00000534839 ZNF333Q96JL9 665 aa13.84□□□□□ -0.19
TNC-209ENST00000534839 PCGF6Q9BYE7 350 aa13.84□□□□□ -0.19
TNC-209ENST00000534839 MTMR10Q9NXD2 777 aa13.84□□□□□ -0.19
TNC-209ENST00000534839 H7C1D1 291 aa13.83□□□□□ -0.2
TNC-209ENST00000534839 EGFRP00533 1210 aa13.83□□□□□ -0.2
TNC-209ENST00000534839 C1orf141Q5JVX7 400 aa13.83□□□□□ -0.2
TNC-209ENST00000534839 SWT1Q5T5J6 900 aaKnown RBP13.83□□□□□ -0.2
TNC-209ENST00000534839 ANKK1Q8NFD2 765 aa13.83□□□□□ -0.2
TNC-209ENST00000534839 RAD17O75943 681 aa13.82□□□□□ -0.2
TNC-209ENST00000534839 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
TNC-209ENST00000534839 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
TNC-209ENST00000534839 DCPSQ96C86 337 aaKnown RBP13.82□□□□□ -0.2
TNC-209ENST00000534839 CDCA5Q96FF9 252 aa13.82□□□□□ -0.2
TNC-209ENST00000534839 SOWAHBA6NEL2 793 aa13.81□□□□□ -0.2
TNC-209ENST00000534839 SLC4A8Q2Y0W8 1093 aa13.81□□□□□ -0.2
TNC-209ENST00000534839 TBC1D10BQ4KMP7 808 aaPredicted RBP13.81□□□□□ -0.2
TNC-209ENST00000534839 L3MBTL2Q969R5 705 aa13.81□□□□□ -0.2
TNC-209ENST00000534839 TMEM134Q9H6X4 195 aa13.81□□□□□ -0.2
TNC-209ENST00000534839 SLC52A2Q9HAB3 445 aa13.81□□□□□ -0.2
TNC-209ENST00000534839 SLC24A3Q9HC58 644 aa13.81□□□□□ -0.2
TNC-209ENST00000534839 POLR2AP24928 1970 aaKnown RBP13.8□□□□□ -0.2
TNC-209ENST00000534839 TCERG1O14776 1098 aaKnown RBP13.8□□□□□ -0.2
TNC-209ENST00000534839 STARD3NLO95772 234 aa13.8□□□□□ -0.2
TNC-209ENST00000534839 DNAJB2P25686 324 aa13.8□□□□□ -0.2
TNC-209ENST00000534839 GRIPAP1Q4V328 841 aa13.8□□□□□ -0.2
TNC-209ENST00000534839 MOB2Q70IA6 237 aa13.8□□□□□ -0.2
TNC-209ENST00000534839 KIF20BQ96Q89 1820 aa13.8□□□□□ -0.2
TNC-209ENST00000534839 IL6STP40189 918 aaPredicted RBP13.79□□□□□ -0.2
TNC-209ENST00000534839 TNIP1Q15025 636 aa13.79□□□□□ -0.2
TNC-209ENST00000534839 TPTE2Q6XPS3 522 aa13.79□□□□□ -0.2
TNC-209ENST00000534839 CD99L2Q8TCZ2 262 aa13.79□□□□□ -0.2
TNC-209ENST00000534839 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.79□□□□□ -0.2
TNC-209ENST00000534839 FAM177BA6PVY3 158 aa13.78□□□□□ -0.2
TNC-209ENST00000534839 MYCP01106 439 aaPredicted RBP13.78□□□□□ -0.2
TNC-209ENST00000534839 PTPN5P54829 565 aa13.78□□□□□ -0.2
TNC-209ENST00000534839 TPRNQ4KMQ1 711 aa13.78□□□□□ -0.2
TNC-209ENST00000534839 LGR6Q9HBX8 967 aa13.78□□□□□ -0.2
TNC-209ENST00000534839 ZNF609O15014 1411 aa13.78□□□□□ -0.2
TNC-209ENST00000534839 UBE2Q2LH0YL09 131 aa13.77□□□□□ -0.21
TNC-209ENST00000534839 ZBTB7BO15156 539 aaPredicted RBP13.77□□□□□ -0.21
TNC-209ENST00000534839 CAP1Q01518 475 aa13.77□□□□□ -0.21
TNC-209ENST00000534839 SREBF2Q12772 1141 aa13.77□□□□□ -0.21
TNC-209ENST00000534839 VPS33BQ9H267 617 aa13.77□□□□□ -0.21
TNC-209ENST00000534839 EFCC1Q9HA90 598 aa13.77□□□□□ -0.21
TNC-209ENST00000534839 ASTN2O75129 1339 aaPredicted RBP13.76□□□□□ -0.21
TNC-209ENST00000534839 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
TNC-209ENST00000534839 FKBP1BP68106 108 aa13.76□□□□□ -0.21
TNC-209ENST00000534839 CRY2Q49AN0 593 aa13.76□□□□□ -0.21
TNC-209ENST00000534839 DZIP3Q86Y13 1208 aaKnown RBP13.76□□□□□ -0.21
TNC-209ENST00000534839 SULF1Q8IWU6 871 aa13.76□□□□□ -0.21
TNC-209ENST00000534839 ERO1AQ96HE7 468 aa13.76□□□□□ -0.21
TNC-209ENST00000534839 SNX27Q96L92 541 aa13.76□□□□□ -0.21
TNC-209ENST00000534839 STAP2Q9UGK3 403 aa13.76□□□□□ -0.21
TNC-209ENST00000534839 YDJCA8MPS7 323 aa13.75□□□□□ -0.21
TNC-209ENST00000534839 GGA3Q9NZ52 723 aa13.75□□□□□ -0.21
TNC-209ENST00000534839 PPEF1O14829 653 aaPredicted RBP13.74□□□□□ -0.21
TNC-209ENST00000534839 A1BGP04217 495 aa13.74□□□□□ -0.21
TNC-209ENST00000534839 PRKCSHP14314 528 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms