RNA–Protein interactions for RNA: ENST00000534391.1

CHRNB3-203, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

TSL 3

Gene CHRNB3, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-203ENST00000534391 HSPA1AP0DMV8 641 aaKnown RBP8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 HSPA1BP0DMV9 641 aaKnown RBP8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 SSFA2P28290 1259 aa8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 C9orf131Q5VYM1 1079 aa8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 C16orf71Q8IYS4 520 aaPredicted RBP8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 LINC00116Q8NCU8 138 aa8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 ITPKCQ96DU7 683 aa8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 RRAGCQ9HB90 399 aa8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 TERF2IPQ9NYB0 399 aa8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 GTF3C3Q9Y5Q9 886 aa8.54□□□□□ -1.04
CHRNB3-203ENST00000534391 UBR3Q6ZT12 1888 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 RGPD2P0DJD1 1756 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 DPEP1P16444 411 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 KCNA3P22001 575 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 RNF20Q5VTR2 975 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 USHBP1Q8N6Y0 703 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 SMARCC1Q92922 1105 aaPredicted RBP8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 ZFAND3Q9H8U3 227 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 KCPQ6ZWJ8 1503 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 EDC4Q6P2E9 1401 aaKnown RBP8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 CGNL1Q0VF96 1302 aa8.53□□□□□ -1.04
CHRNB3-203ENST00000534391 CYP27B1O15528 508 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 SOX11P35716 441 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 AMPHP49418 695 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 SEMA3FQ13275 785 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 HDGFL2Q7Z4V5 671 aaPredicted RBP8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 PIGBQ92521 554 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 KLF16Q9BXK1 252 aaPredicted RBP8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 N4BP2Q86UW6 1770 aaPredicted RBP8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 C10orf71Q711Q0 1435 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 NSD3Q9BZ95 1437 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 KIF13BQ9NQT8 1826 aa8.52□□□□□ -1.05
CHRNB3-203ENST00000534391 A0A1W2PP64 1363 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 LOC102724428A0A0B4J2F2 783 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 BMP1P13497 986 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 SIK1P57059 783 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 ITPK1Q13572 414 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 SMC1BQ8NDV3 1235 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 RAPGEF4Q8WZA2 1011 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 ATP13A2Q9NQ11 1180 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 KIF7Q2M1P5 1343 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 KDM2BQ8NHM5 1336 aa8.51□□□□□ -1.05
CHRNB3-203ENST00000534391 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 MAP2P11137 1827 aaKnown RBP8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 ERVH48-1M5A8F1 160 aa8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 TATP17735 454 aaPredicted RBP8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 TMPRSS4Q9NRS4 437 aa8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 DACH1Q9UI36 760 aa8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 WASHC2AQ641Q2 1341 aa8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 PCDH11XQ9BZA7 1347 aa8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 PCDH11YQ9BZA8 1340 aa8.5□□□□□ -1.05
CHRNB3-203ENST00000534391 RRS1Q15050 365 aaKnown RBP8.49□□□□□ -1.05
CHRNB3-203ENST00000534391 SLFNL1Q499Z3 407 aa8.49□□□□□ -1.05
CHRNB3-203ENST00000534391 NLGN1Q8N2Q7 840 aa8.49□□□□□ -1.05
CHRNB3-203ENST00000534391 COG3Q96JB2 828 aa8.49□□□□□ -1.05
CHRNB3-203ENST00000534391 DCAF5Q96JK2 942 aa8.49□□□□□ -1.05
CHRNB3-203ENST00000534391 RNF181Q9P0P0 153 aa8.49□□□□□ -1.05
CHRNB3-203ENST00000534391 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
CHRNB3-203ENST00000534391 UPP2O95045 317 aa8.48□□□□□ -1.05
CHRNB3-203ENST00000534391 MEIOBQ8N635 442 aa8.48□□□□□ -1.05
CHRNB3-203ENST00000534391 CYLDQ9NQC7 956 aa8.48□□□□□ -1.05
CHRNB3-203ENST00000534391 CCDC87Q9NVE4 849 aa8.48□□□□□ -1.05
CHRNB3-203ENST00000534391 PIM2Q9P1W9 311 aa8.48□□□□□ -1.05
CHRNB3-203ENST00000534391 ASAP1Q9ULH1 1129 aa8.48□□□□□ -1.05
CHRNB3-203ENST00000534391 PCDHB11Q9Y5F2 797 aa8.48□□□□□ -1.05
CHRNB3-203ENST00000534391 BRCA1P38398 1863 aaKnown RBP8.48□□□□□ -1.05
CHRNB3-203ENST00000534391 ITGB4P16144 1822 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 PKD1L3Q7Z443 1732 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 A6NJR5 290 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 GYS1P13807 737 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 CBLBQ13191 982 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 SCARF1Q14162 830 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 HSP90AB2PQ58FF8 381 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 TRAPPC3LQ5T215 181 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 MRPL14Q6P1L8 145 aaKnown RBP8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 TRIM46Q7Z4K8 759 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 RNF135Q8IUD6 432 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 GMPR2Q9P2T1 348 aaKnown RBP8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 RTL1A6NKG5 1358 aa8.47□□□□□ -1.05
CHRNB3-203ENST00000534391 ARFGEF1Q9Y6D6 1849 aa8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 POM121CA8CG34 1229 aa8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 DALRD3Q5D0E6 543 aaKnown RBP8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 LINC00528Q8N1L1 170 aa8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 SLC4A9Q96Q91 983 aa8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 PANK3Q9H999 370 aa8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 SENP2Q9HC62 589 aa8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 ATG3Q9NT62 314 aa8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 RTCBQ9Y3I0 505 aaKnown RBP8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 TNRC6CQ9HCJ0 1690 aaKnown RBP8.46□□□□□ -1.06
CHRNB3-203ENST00000534391 FYB1O15117 783 aa8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 FOXN1O15353 648 aa8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 VEGFAP15692 232 aaPredicted RBP8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 C6orf118Q5T5N4 469 aa8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 ZNF787Q6DD87 383 aa8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 KIFC2Q96AC6 838 aa8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 PURBQ96QR8 312 aaKnown RBP8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 POLR3GLQ9BT43 218 aa8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 PARP3Q9Y6F1 533 aa8.45□□□□□ -1.06
CHRNB3-203ENST00000534391 C4AP0C0L4 1744 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms