RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 LBX1P52954 281 aa11.32□□□□□ -0.6
COPB1-211ENST00000534234 FOXO4P98177 505 aa11.32□□□□□ -0.6
COPB1-211ENST00000534234 TXNRD3Q86VQ6 643 aa11.32□□□□□ -0.6
COPB1-211ENST00000534234 BEGAINQ9BUH8 593 aa11.32□□□□□ -0.6
COPB1-211ENST00000534234 COA1Q9GZY4 146 aa11.32□□□□□ -0.6
COPB1-211ENST00000534234 MED23Q9ULK4 1368 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 ZNF804BA4D1E1 1349 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 ADM5C9JUS6 153 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 AOC2O75106 756 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 KCNA4P22459 653 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 HUNKP57058 714 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 CHRNDQ07001 517 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 IFIT5Q13325 482 aaKnown RBP11.31□□□□□ -0.6
COPB1-211ENST00000534234 SCARF1Q14162 830 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 SLC4A10Q6U841 1118 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 SULF1Q8IWU6 871 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 C9orf78Q9NZ63 289 aaPredicted RBP11.31□□□□□ -0.6
COPB1-211ENST00000534234 CHMP3Q9Y3E7 222 aa11.31□□□□□ -0.6
COPB1-211ENST00000534234 ASTN2O75129 1339 aaPredicted RBP11.3□□□□□ -0.6
COPB1-211ENST00000534234 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
COPB1-211ENST00000534234 GRM8O00222 908 aa11.3□□□□□ -0.6
COPB1-211ENST00000534234 KCNJ4P48050 445 aa11.3□□□□□ -0.6
COPB1-211ENST00000534234 LMBR1LQ6UX01 489 aa11.3□□□□□ -0.6
COPB1-211ENST00000534234 C2orf69Q8N8R5 385 aa11.3□□□□□ -0.6
COPB1-211ENST00000534234 FBXW7Q969H0 707 aa11.3□□□□□ -0.6
COPB1-211ENST00000534234 MYOZ2Q9NPC6 264 aa11.3□□□□□ -0.6
COPB1-211ENST00000534234 TAF5LO75529 589 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
COPB1-211ENST00000534234 ALDH1L1O75891 902 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 HSPA8P11142 646 aaKnown RBP11.29□□□□□ -0.6
COPB1-211ENST00000534234 KLRK1P26718 216 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 EPHA10Q5JZY3 1008 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 DACT2Q5SW24 774 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 STRIP1Q5VSL9 837 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 ANGEL2Q5VTE6 544 aaKnown RBP11.29□□□□□ -0.6
COPB1-211ENST00000534234 TTLL5Q6EMB2 1281 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 OGFOD1Q8N543 542 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 HELBQ8NG08 1087 aaPredicted RBP11.29□□□□□ -0.6
COPB1-211ENST00000534234 MXD3Q9BW11 206 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 SRCIN1Q9C0H9 1055 aa11.29□□□□□ -0.6
COPB1-211ENST00000534234 GBA2Q9HCG7 927 aaPredicted RBP11.29□□□□□ -0.6
COPB1-211ENST00000534234 SNAP23O00161 211 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 CCDC57Q2TAC2 916 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 MYO3BQ8WXR4 1341 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 ZNF609O15014 1411 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 E9PSI1 815 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 GTF2IP78347 998 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 NOGQ13253 232 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 NBPF9Q3BBW0 867 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 TAF7LQ5H9L4 462 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 RGMBQ6NW40 437 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 LDHAL6AQ6ZMR3 332 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 ZNF594Q96JF6 807 aaPredicted RBP11.28□□□□□ -0.6
COPB1-211ENST00000534234 CD209Q9NNX6 404 aa11.28□□□□□ -0.6
COPB1-211ENST00000534234 MRPL50Q8N5N7 158 aaKnown RBP11.27□□□□□ -0.61
COPB1-211ENST00000534234 CDCA5Q96FF9 252 aa11.27□□□□□ -0.61
COPB1-211ENST00000534234 ZIC5Q96T25 663 aa11.27□□□□□ -0.61
COPB1-211ENST00000534234 CNNM1Q9NRU3 951 aa11.27□□□□□ -0.61
COPB1-211ENST00000534234 WNT10BO00744 389 aa11.26□□□□□ -0.61
COPB1-211ENST00000534234 PLIN1O60240 522 aa11.26□□□□□ -0.61
COPB1-211ENST00000534234 NBPF7P0C2Y1 421 aaPredicted RBP11.26□□□□□ -0.61
COPB1-211ENST00000534234 MMP14P50281 582 aa11.26□□□□□ -0.61
COPB1-211ENST00000534234 ZNF157P51786 506 aaPredicted RBP11.26□□□□□ -0.61
COPB1-211ENST00000534234 BRPF1P55201 1214 aaPredicted RBP11.26□□□□□ -0.61
COPB1-211ENST00000534234 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
COPB1-211ENST00000534234 C15orf52Q6ZUT6 534 aaKnown RBP11.26□□□□□ -0.61
COPB1-211ENST00000534234 KIAA0825Q8IV33 1275 aa11.26□□□□□ -0.61
COPB1-211ENST00000534234 CCDC102AQ96A19 550 aa11.26□□□□□ -0.61
COPB1-211ENST00000534234 TSKSQ9UJT2 592 aa11.26□□□□□ -0.61
COPB1-211ENST00000534234 SCAF8Q9UPN6 1271 aaKnown RBP11.26□□□□□ -0.61
COPB1-211ENST00000534234 PITPNM2Q9BZ72 1349 aa11.26□□□□□ -0.61
COPB1-211ENST00000534234 CA12O43570 354 aa11.25□□□□□ -0.61
COPB1-211ENST00000534234 SSH1Q8WYL5 1049 aa11.25□□□□□ -0.61
COPB1-211ENST00000534234 SUCLG2Q96I99 432 aa11.25□□□□□ -0.61
COPB1-211ENST00000534234 HDAC9Q9UKV0 1011 aa11.25□□□□□ -0.61
COPB1-211ENST00000534234 FAM155AB1AL88 458 aaPredicted RBP11.24□□□□□ -0.61
COPB1-211ENST00000534234 PRAMEF18Q5VWM3 479 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 ZNF804AQ7Z570 1209 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 CDCA7LQ96GN5 454 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 KAZALD1Q96I82 304 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 PTPRCP08575 1304 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 IRS2Q9Y4H2 1338 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 SASH1O94885 1247 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 IL1R1P14778 569 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 FKBP1BP68106 108 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
COPB1-211ENST00000534234 PUS3Q9BZE2 481 aaKnown RBP11.24□□□□□ -0.61
COPB1-211ENST00000534234 SCN9AQ15858 1988 aa11.24□□□□□ -0.61
COPB1-211ENST00000534234 UTYO14607 1347 aa11.23□□□□□ -0.61
COPB1-211ENST00000534234 UBE4AQ14139 1066 aa11.23□□□□□ -0.61
COPB1-211ENST00000534234 CERS5Q8N5B7 392 aa11.23□□□□□ -0.61
COPB1-211ENST00000534234 BICC1Q9H694 974 aaKnown RBP11.23□□□□□ -0.61
COPB1-211ENST00000534234 UBE2Q2LH0YL09 131 aa11.22□□□□□ -0.61
COPB1-211ENST00000534234 DLGAP5Q15398 846 aa11.22□□□□□ -0.61
COPB1-211ENST00000534234 ALDH1L2Q3SY69 923 aa11.22□□□□□ -0.61
COPB1-211ENST00000534234 RABL6Q3YEC7 729 aaPredicted RBP11.22□□□□□ -0.61
COPB1-211ENST00000534234 MOB2Q70IA6 237 aa11.22□□□□□ -0.61
COPB1-211ENST00000534234 ZBED3Q96IU2 234 aaPredicted RBP11.22□□□□□ -0.61
COPB1-211ENST00000534234 USP44Q9H0E7 712 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms