RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 HSPA6P17066 643 aa12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 RTL5Q5HYW3 569 aaPredicted RBP12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 GPR108Q9NPR9 543 aa12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 BSDC1Q9NW68 430 aaPredicted RBP12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 ZNRF3Q9ULT6 936 aa12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 LTBP1Q14766 1721 aa12.33□□□□□ -0.44
LDLRAD3-206ENST00000534091 ARAP2Q8WZ64 1704 aa12.32□□□□□ -0.44
LDLRAD3-206ENST00000534091 POTECB2RU33 542 aa12.32□□□□□ -0.44
LDLRAD3-206ENST00000534091 EYA2O00167 538 aa12.32□□□□□ -0.44
LDLRAD3-206ENST00000534091 EIF5BO60841 1220 aaKnown RBP12.32□□□□□ -0.44
LDLRAD3-206ENST00000534091 DDNO94850 711 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-206ENST00000534091 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-206ENST00000534091 CCDC57Q2TAC2 916 aa12.32□□□□□ -0.44
LDLRAD3-206ENST00000534091 PNMA8AQ86V59 439 aaPredicted RBP12.32□□□□□ -0.44
LDLRAD3-206ENST00000534091 APLP1P51693 650 aa12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 IFIT5Q13325 482 aaKnown RBP12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 TNIP1Q15025 636 aa12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 WASHC4Q2M389 1173 aa12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 KLHDC4Q8TBB5 520 aa12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 HACL1Q9UJ83 578 aa12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 NSFL1CQ9UNZ2 370 aaKnown RBP12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 XDHP47989 1333 aa12.31□□□□□ -0.44
LDLRAD3-206ENST00000534091 DUOX1Q9NRD9 1551 aa12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 ANKRD18BA2A2Z9 1011 aa12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 ATP2B4P23634 1241 aa12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 IGHMBP2P38935 993 aaKnown RBP12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 AOC3Q16853 763 aa12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 SIL1Q9H173 461 aa12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 SEC31BQ9NQW1 1179 aa12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 ZNF541Q9H0D2 1346 aa12.3□□□□□ -0.44
LDLRAD3-206ENST00000534091 ZNF609O15014 1411 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 ERC2O15083 957 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 CDC45O75419 566 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 GLRX3O76003 335 aaKnown RBP12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 IFIT2P09913 472 aaKnown RBP12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 ITGA6P23229 1130 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 LMOD1P29536 600 aaPredicted RBP12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 GPSM2P81274 684 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 TNNI3KQ59H18 835 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 AACSQ86V21 672 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 LDHDQ86WU2 507 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 TBC1D16Q8TBP0 767 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 PI4K2BQ8TCG2 481 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 EAF2Q96CJ1 260 aaPredicted RBP12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 ZC3H12CQ9C0D7 883 aaKnown RBP12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 TAF1DQ9H5J8 278 aaPredicted RBP12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 GREM2Q9H772 168 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 ANKIB1Q9P2G1 1089 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 GGA1Q9UJY5 639 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 FPGT-TNNI3KV9GXZ4 949 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 COL4A5P29400 1685 aa12.29□□□□□ -0.44
LDLRAD3-206ENST00000534091 C6orf229H3BNL8 230 aa12.28□□□□□ -0.44
LDLRAD3-206ENST00000534091 CIAPIN1Q6FI81 312 aa12.28□□□□□ -0.44
LDLRAD3-206ENST00000534091 MPHOSPH8Q99549 860 aa12.28□□□□□ -0.44
LDLRAD3-206ENST00000534091 ANKRD2Q9GZV1 360 aa12.28□□□□□ -0.44
LDLRAD3-206ENST00000534091 ECHDC1Q9NTX5 307 aa12.28□□□□□ -0.44
LDLRAD3-206ENST00000534091 POLLQ9UGP5 575 aa12.28□□□□□ -0.44
LDLRAD3-206ENST00000534091 LEMD3Q9Y2U8 911 aa12.28□□□□□ -0.44
LDLRAD3-206ENST00000534091 MYH7P12883 1935 aa12.27□□□□□ -0.44
LDLRAD3-206ENST00000534091 SDSP20132 328 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 RPS12P25398 132 aaKnown RBP12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 EPHX2P34913 555 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 MMP14P50281 582 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 CXCL9Q07325 125 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 TFCP2Q12800 502 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 TAF7LQ5H9L4 462 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 CHADLQ6NUI6 762 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 USP50Q70EL3 339 aaPredicted RBP12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 DPF2Q92785 391 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 ZNF594Q96JF6 807 aaPredicted RBP12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 MINPP1Q9UNW1 487 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 MED23Q9ULK4 1368 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 AKAP11Q9UKA4 1901 aa12.27□□□□□ -0.45
LDLRAD3-206ENST00000534091 ADAMTSL1Q8N6G6 1762 aa12.26□□□□□ -0.45
LDLRAD3-206ENST00000534091 PSME4Q14997 1843 aa12.26□□□□□ -0.45
LDLRAD3-206ENST00000534091 UFL1O94874 794 aa12.26□□□□□ -0.45
LDLRAD3-206ENST00000534091 LRRC24Q50LG9 513 aa12.26□□□□□ -0.45
LDLRAD3-206ENST00000534091 TBC1D9Q6ZT07 1266 aa12.26□□□□□ -0.45
LDLRAD3-206ENST00000534091 PODNQ7Z5L7 613 aa12.26□□□□□ -0.45
LDLRAD3-206ENST00000534091 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
LDLRAD3-206ENST00000534091 COL4A1P02462 1669 aa12.26□□□□□ -0.45
LDLRAD3-206ENST00000534091 SCNN1DP51172 638 aa12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 CASC1Q6TDU7 716 aa12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 PUS3Q9BZE2 481 aaKnown RBP12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 UPF2Q9HAU5 1272 aaKnown RBP12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 GPRC5DQ9NZD1 345 aa12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 CEP126Q9P2H0 1117 aa12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 DBNLQ9UJU6 430 aaKnown RBP12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 AKAP2Q9Y2D5 859 aa12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 MROH5Q6ZUA9 1318 aa12.25□□□□□ -0.45
LDLRAD3-206ENST00000534091 G3V3G9 751 aa12.24□□□□□ -0.45
LDLRAD3-206ENST00000534091 ECE2O60344 883 aa12.24□□□□□ -0.45
LDLRAD3-206ENST00000534091 SEC24BO95487 1268 aa12.24□□□□□ -0.45
LDLRAD3-206ENST00000534091 ATP5JP18859 108 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms