RNA–Protein interactions for RNA: ENST00000534055.1

AP001360.1-201, humanhuman

TSL 2 BASIC

Gene AP001360.1, Length 518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001360.1-201ENST00000534055 APOBEC3FQ8IUX4 373 aaKnown RBP13.09□□□□□ -0.31
AP001360.1-201ENST00000534055 OGFOD1Q8N543 542 aa13.09□□□□□ -0.31
AP001360.1-201ENST00000534055 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
AP001360.1-201ENST00000534055 GDF15Q99988 308 aa13.09□□□□□ -0.31
AP001360.1-201ENST00000534055 ARHGAP39Q9C0H5 1083 aa13.09□□□□□ -0.31
AP001360.1-201ENST00000534055 PANK3Q9H999 370 aa13.09□□□□□ -0.31
AP001360.1-201ENST00000534055 BIN2Q9UBW5 565 aaPredicted RBP13.09□□□□□ -0.31
AP001360.1-201ENST00000534055 LAMB1P07942 1786 aa13.08□□□□□ -0.32
AP001360.1-201ENST00000534055 WNT10BO00744 389 aa13.08□□□□□ -0.32
AP001360.1-201ENST00000534055 PPP1R12BO60237 982 aaPredicted RBP13.08□□□□□ -0.32
AP001360.1-201ENST00000534055 UFL1O94874 794 aa13.08□□□□□ -0.32
AP001360.1-201ENST00000534055 SASH1O94885 1247 aa13.08□□□□□ -0.32
AP001360.1-201ENST00000534055 TDHQ8IZJ6 230 aa13.08□□□□□ -0.32
AP001360.1-201ENST00000534055 RTF1Q92541 710 aaKnown RBP13.08□□□□□ -0.32
AP001360.1-201ENST00000534055 FAM161BQ96MY7 647 aa13.08□□□□□ -0.32
AP001360.1-201ENST00000534055 WDHD1O75717 1129 aaPredicted RBP13.07□□□□□ -0.32
AP001360.1-201ENST00000534055 PRMT2P55345 433 aa13.07□□□□□ -0.32
AP001360.1-201ENST00000534055 U2AF1L4Q8WU68 220 aaKnown RBP13.07□□□□□ -0.32
AP001360.1-201ENST00000534055 CELF1Q92879 486 aaKnown RBP13.07□□□□□ -0.32
AP001360.1-201ENST00000534055 GUCD1Q96NT3 240 aa13.07□□□□□ -0.32
AP001360.1-201ENST00000534055 GMLQ99445 158 aa13.07□□□□□ -0.32
AP001360.1-201ENST00000534055 ZMYND8Q9ULU4 1186 aaPredicted RBP13.07□□□□□ -0.32
AP001360.1-201ENST00000534055 ZSWIM8A7E2V4 1837 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 LAMA3Q16787 3333 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 USP17L3A6NCW0 530 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 USP17L4A6NCW7 530 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 GNRH1P01148 92 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 GRK4P32298 578 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 GJA5P36382 358 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 UBXN2AP68543 259 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 MCM10Q7L590 875 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 USP17L1Q7RTZ2 530 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 C7orf61Q8IZ16 206 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 RAET1EQ8TD07 263 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 FBXW7Q969H0 707 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 TRMT112Q9UI30 125 aaKnown RBP13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 SH3TC1Q8TE82 1336 aa13.06□□□□□ -0.32
AP001360.1-201ENST00000534055 TNFRSF10AO00220 468 aa13.05□□□□□ -0.32
AP001360.1-201ENST00000534055 LACTBP83111 547 aaPredicted RBP13.05□□□□□ -0.32
AP001360.1-201ENST00000534055 MAP3K11Q16584 847 aa13.05□□□□□ -0.32
AP001360.1-201ENST00000534055 MAFAQ8NHW3 353 aaPredicted RBP13.05□□□□□ -0.32
AP001360.1-201ENST00000534055 ANKIB1Q9P2G1 1089 aa13.05□□□□□ -0.32
AP001360.1-201ENST00000534055 TESPA1A2RU30 521 aaPredicted RBP13.04□□□□□ -0.32
AP001360.1-201ENST00000534055 IREB2P48200 963 aaKnown RBP13.04□□□□□ -0.32
AP001360.1-201ENST00000534055 TRIM47Q96LD4 638 aa13.04□□□□□ -0.32
AP001360.1-201ENST00000534055 UBE2OQ9C0C9 1292 aaKnown RBP13.04□□□□□ -0.32
AP001360.1-201ENST00000534055 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
AP001360.1-201ENST00000534055 PSME4Q14997 1843 aa13.04□□□□□ -0.32
AP001360.1-201ENST00000534055 COL1A1P02452 1464 aaPredicted RBP13.04□□□□□ -0.32
AP001360.1-201ENST00000534055 CCL15-CCL14A0A0B4J2E2 113 aa13.03□□□□□ -0.32
AP001360.1-201ENST00000534055 SYN1P17600 705 aa13.03□□□□□ -0.32
AP001360.1-201ENST00000534055 CCL15Q16663 113 aa13.03□□□□□ -0.32
AP001360.1-201ENST00000534055 OPTNQ96CV9 577 aa13.03□□□□□ -0.32
AP001360.1-201ENST00000534055 DEFB129Q9H1M3 183 aa13.03□□□□□ -0.32
AP001360.1-201ENST00000534055 KNSTRNQ9Y448 316 aa13.03□□□□□ -0.32
AP001360.1-201ENST00000534055 RIPOR2Q9Y4F9 1068 aa13.03□□□□□ -0.32
AP001360.1-201ENST00000534055 UNCXA6NJT0 531 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 SGPL1O95470 568 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 MAGEA10P43363 369 aaPredicted RBP13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 NLRP10Q86W26 655 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 ANKRD13AQ8IZ07 590 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 ZNF428Q96B54 188 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 MXD3Q9BW11 206 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 ELP3Q9H9T3 547 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 SSC5DA1L4H1 1573 aa13.02□□□□□ -0.33
AP001360.1-201ENST00000534055 HOXD10P28358 340 aa13.01□□□□□ -0.33
AP001360.1-201ENST00000534055 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
AP001360.1-201ENST00000534055 HSP90AB3PQ58FF7 597 aa13.01□□□□□ -0.33
AP001360.1-201ENST00000534055 ZNF697Q5TEC3 545 aa13.01□□□□□ -0.33
AP001360.1-201ENST00000534055 FAM43AQ8N2R8 423 aa13.01□□□□□ -0.33
AP001360.1-201ENST00000534055 BRI3BPQ8WY22 251 aa13.01□□□□□ -0.33
AP001360.1-201ENST00000534055 SRRDQ9UH36 339 aa13.01□□□□□ -0.33
AP001360.1-201ENST00000534055 MYPNQ86TC9 1320 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 MYO3BQ8WXR4 1341 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 TLR2O60603 784 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 FMNL1O95466 1100 aaPredicted RBP13□□□□□ -0.33
AP001360.1-201ENST00000534055 DCTN1Q14203 1278 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 SUPT20HL1Q3ZLR7 823 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 FAM109BQ6ICB4 259 aaPredicted RBP13□□□□□ -0.33
AP001360.1-201ENST00000534055 PODNQ7Z5L7 613 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 UNC93B1Q9H1C4 597 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 PODXL2Q9NZ53 605 aa13□□□□□ -0.33
AP001360.1-201ENST00000534055 SPTBN5Q9NRC6 3674 aaKnown RBP13□□□□□ -0.33
AP001360.1-201ENST00000534055 PRKAR2BP31323 418 aa12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 PSMC4P43686 418 aa12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 GTF2A2P52657 109 aa12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 RPS8P62241 208 aaKnown RBP12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 PAWRQ96IZ0 340 aaKnown RBP12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 MS4A4AQ96JQ5 239 aa12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 THUMPD2Q9BTF0 503 aaKnown RBP12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 VCANP13611 3396 aa12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 COL4A1P02462 1669 aa12.99□□□□□ -0.33
AP001360.1-201ENST00000534055 POTEB2H3BUK9 544 aa12.98□□□□□ -0.33
AP001360.1-201ENST00000534055 OSBPP22059 807 aa12.98□□□□□ -0.33
AP001360.1-201ENST00000534055 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
AP001360.1-201ENST00000534055 PPP2R3BQ9Y5P8 575 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms