RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 WEE1P30291 646 aa7.47□□□□□ -1.21
CHKA-208ENST00000533910 ADD1P35611 737 aaKnown RBP7.47□□□□□ -1.21
CHKA-208ENST00000533910 ERVK-9P63128 1117 aa7.47□□□□□ -1.21
CHKA-208ENST00000533910 CC2D2BQ6DHV5 1058 aa7.47□□□□□ -1.21
CHKA-208ENST00000533910 NGDNQ8NEJ9 315 aaKnown RBP7.47□□□□□ -1.21
CHKA-208ENST00000533910 PMFBP1Q8TBY8 1022 aa7.47□□□□□ -1.21
CHKA-208ENST00000533910 GTF3C2Q8WUA4 911 aaPredicted RBP7.47□□□□□ -1.21
CHKA-208ENST00000533910 RAB6BQ9NRW1 208 aa7.47□□□□□ -1.21
CHKA-208ENST00000533910 MAP4K5Q9Y4K4 846 aa7.47□□□□□ -1.21
CHKA-208ENST00000533910 DNMT3AQ9Y6K1 912 aaPredicted RBP7.47□□□□□ -1.21
CHKA-208ENST00000533910 RNF123Q5XPI4 1314 aa7.47□□□□□ -1.21
CHKA-208ENST00000533910 KIF24Q5T7B8 1368 aa7.46□□□□□ -1.21
CHKA-208ENST00000533910 MED1Q15648 1581 aaPredicted RBP7.46□□□□□ -1.21
CHKA-208ENST00000533910 UNCXA6NJT0 531 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 H3BRB1 525 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 TERTO14746 1132 aaKnown RBP7.46□□□□□ -1.22
CHKA-208ENST00000533910 DIAPH1O60610 1272 aaKnown RBP7.46□□□□□ -1.22
CHKA-208ENST00000533910 LILRA1O75019 489 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 NR3C2P08235 984 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 GDF10P55107 478 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 DNAJC14Q6Y2X3 702 aaPredicted RBP7.46□□□□□ -1.22
CHKA-208ENST00000533910 CCDC146Q8IYE0 955 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 MPNDQ8N594 471 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 C1orf216Q8TAB5 229 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 SCG3Q8WXD2 468 aaKnown RBP7.46□□□□□ -1.22
CHKA-208ENST00000533910 RUNDC1Q96C34 613 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 CDK15Q96Q40 435 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 TUT1Q9H6E5 874 aaKnown RBP7.46□□□□□ -1.22
CHKA-208ENST00000533910 C19orf44Q9H6X5 657 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 ETNK1Q9HBU6 452 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 EMILIN1Q9Y6C2 1016 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 DLG5Q8TDM6 1919 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 SBNO1A3KN83 1393 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 RTL1A6NKG5 1358 aa7.46□□□□□ -1.22
CHKA-208ENST00000533910 APAF1O14727 1248 aa7.45□□□□□ -1.22
CHKA-208ENST00000533910 MARSP56192 900 aaKnown RBP7.45□□□□□ -1.22
CHKA-208ENST00000533910 INSM1Q01101 510 aaPredicted RBP7.45□□□□□ -1.22
CHKA-208ENST00000533910 PPP1R26Q5T8A7 1209 aaPredicted RBP7.45□□□□□ -1.22
CHKA-208ENST00000533910 TSPAN10Q9H1Z9 355 aaPredicted RBP7.45□□□□□ -1.22
CHKA-208ENST00000533910 FLT4P35916 1363 aa7.45□□□□□ -1.22
CHKA-208ENST00000533910 MSH6P52701 1360 aa7.45□□□□□ -1.22
CHKA-208ENST00000533910 NHSL1Q5SYE7 1610 aa7.45□□□□□ -1.22
CHKA-208ENST00000533910 CAMTA1Q9Y6Y1 1673 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 PXDNQ92626 1479 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 ABCC6O95255 1503 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 SENP3-EIF4A1A0A087X0R7 540 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 WIPF1O43516 503 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 C21orf2O43822 256 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 U2AF1L5P0DN76 240 aaPredicted RBP7.44□□□□□ -1.22
CHKA-208ENST00000533910 IL13P35225 146 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 U2AF1Q01081 240 aaKnown RBP eCLIP7.44□□□□□ -1.22
CHKA-208ENST00000533910 ECM1Q16610 540 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 SLC16A10Q8TF71 515 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 PLEKHF1Q96S99 279 aa7.44□□□□□ -1.22
CHKA-208ENST00000533910 SUPT16HQ9Y5B9 1047 aaKnown RBP7.44□□□□□ -1.22
CHKA-208ENST00000533910 ICMTO60725 284 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 NEFLP07196 543 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 FBLN1P23142 703 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 RRS1Q15050 365 aaKnown RBP7.43□□□□□ -1.22
CHKA-208ENST00000533910 ESCO1Q5FWF5 840 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 TRMT2AQ8IZ69 625 aaKnown RBP7.43□□□□□ -1.22
CHKA-208ENST00000533910 TCP11L2Q8N4U5 519 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 USP3Q9Y6I4 520 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 USP19O94966 1318 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 MAP3K19Q56UN5 1328 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 ABCA3Q99758 1704 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 ARHGEF10O15013 1369 aa7.43□□□□□ -1.22
CHKA-208ENST00000533910 A0A1W2PRU2 124 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 U2SURPO15042 1029 aaKnown RBP7.42□□□□□ -1.22
CHKA-208ENST00000533910 ADH1CP00326 375 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 INHAP05111 366 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 BMP1P13497 986 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 ATF3P18847 181 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 SLFN5Q08AF3 891 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 NNTQ13423 1086 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 DUSP27Q5VZP5 1158 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 CCDC125Q86Z20 511 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 GLYCTKQ8IVS8 523 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 CCDC116Q8IYX3 515 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 ORAI2Q96SN7 254 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 SAP130Q9H0E3 1048 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 ZNF335Q9H4Z2 1342 aaPredicted RBP7.42□□□□□ -1.22
CHKA-208ENST00000533910 KDRP35968 1356 aa7.42□□□□□ -1.22
CHKA-208ENST00000533910 LRRC37A3O60309 1634 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 LMO7Q8WWI1 1683 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 FAM208AQ9UK61 1670 aaKnown RBP7.41□□□□□ -1.22
CHKA-208ENST00000533910 E9PSI1 815 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 M0R2N6 131 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 EPHA4P54764 986 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 TAGLNQ01995 201 aaKnown RBP7.41□□□□□ -1.22
CHKA-208ENST00000533910 CBLBQ13191 982 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 EIF4A2Q14240 407 aaKnown RBP7.41□□□□□ -1.22
CHKA-208ENST00000533910 ERICH6BQ5W0A0 696 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 TRIM46Q7Z4K8 759 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 NPAS3Q8IXF0 933 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 PNNQ9H307 717 aaKnown RBP7.41□□□□□ -1.22
CHKA-208ENST00000533910 ARHGEF10LQ9HCE6 1279 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 NXF1Q9UBU9 619 aaKnown RBP7.41□□□□□ -1.22
CHKA-208ENST00000533910 STK17AQ9UEE5 414 aa7.41□□□□□ -1.22
CHKA-208ENST00000533910 MAPK8IP3Q9UPT6 1336 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms