RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 CTU1Q7Z7A3 348 aaKnown RBP20.2■□□□□ 0.82
CHMP4A-207ENST00000533523 MRS2Q9HD23 443 aa20.2■□□□□ 0.82
CHMP4A-207ENST00000533523 MYOZ2Q9NPC6 264 aa20.2■□□□□ 0.82
CHMP4A-207ENST00000533523 USP17L3A6NCW0 530 aa20.19■□□□□ 0.82
CHMP4A-207ENST00000533523 USP17L4A6NCW7 530 aa20.19■□□□□ 0.82
CHMP4A-207ENST00000533523 USP17L8P0C7I0 530 aa20.19■□□□□ 0.82
CHMP4A-207ENST00000533523 CCDC184Q52MB2 194 aa20.19■□□□□ 0.82
CHMP4A-207ENST00000533523 USP17L1Q7RTZ2 530 aa20.19■□□□□ 0.82
CHMP4A-207ENST00000533523 FBXW7Q969H0 707 aa20.19■□□□□ 0.82
CHMP4A-207ENST00000533523 MED23Q9ULK4 1368 aa20.19■□□□□ 0.82
CHMP4A-207ENST00000533523 MOB2Q70IA6 237 aa20.18■□□□□ 0.82
CHMP4A-207ENST00000533523 TSPYL6Q8N831 410 aa20.18■□□□□ 0.82
CHMP4A-207ENST00000533523 CHMP4AQ9BY43 222 aa20.18■□□□□ 0.82
CHMP4A-207ENST00000533523 SCAF8Q9UPN6 1271 aaKnown RBP20.18■□□□□ 0.82
CHMP4A-207ENST00000533523 A0A1B0GUL6 1792 aa20.18■□□□□ 0.82
CHMP4A-207ENST00000533523 PI4KAP2A4QPH2 592 aa20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 IGKV5-2P06315 115 aa20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 PI4KAP1Q8N8J0 262 aa20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 TSR2Q969E8 191 aaKnown RBP20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 GMLQ99445 158 aa20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 STK31Q9BXU1 1019 aa20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 GREM2Q9H772 168 aa20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 PITPNM2Q9BZ72 1349 aa20.17■□□□□ 0.82
CHMP4A-207ENST00000533523 RBBP6Q7Z6E9 1792 aaKnown RBP20.16■□□□□ 0.82
CHMP4A-207ENST00000533523 KSR2Q6VAB6 950 aa20.16■□□□□ 0.82
CHMP4A-207ENST00000533523 PODNQ7Z5L7 613 aa20.16■□□□□ 0.82
CHMP4A-207ENST00000533523 LAMB1P07942 1786 aa20.16■□□□□ 0.82
CHMP4A-207ENST00000533523 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
CHMP4A-207ENST00000533523 WTIPA6NIX2 430 aaPredicted RBP20.15■□□□□ 0.82
CHMP4A-207ENST00000533523 FKBP1BP68106 108 aa20.15■□□□□ 0.82
CHMP4A-207ENST00000533523 CWF19L2Q2TBE0 894 aaKnown RBP20.15■□□□□ 0.82
CHMP4A-207ENST00000533523 TTLL11Q8NHH1 800 aa20.15■□□□□ 0.82
CHMP4A-207ENST00000533523 MXD3Q9BW11 206 aa20.15■□□□□ 0.82
CHMP4A-207ENST00000533523 R3HDMLQ9H3Y0 253 aa20.15■□□□□ 0.82
CHMP4A-207ENST00000533523 BSDC1Q9NW68 430 aaPredicted RBP20.15■□□□□ 0.82
CHMP4A-207ENST00000533523 CCT4P50991 539 aaKnown RBP20.14■□□□□ 0.81
CHMP4A-207ENST00000533523 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
CHMP4A-207ENST00000533523 ZNF296Q8WUU4 475 aaPredicted RBP20.14■□□□□ 0.81
CHMP4A-207ENST00000533523 MINPP1Q9UNW1 487 aa20.14■□□□□ 0.81
CHMP4A-207ENST00000533523 NEURL1BA8MQ27 555 aa20.13■□□□□ 0.81
CHMP4A-207ENST00000533523 TTLL12Q14166 644 aaPredicted RBP20.13■□□□□ 0.81
CHMP4A-207ENST00000533523 TBC1D8O95759 1140 aa20.12■□□□□ 0.81
CHMP4A-207ENST00000533523 IGHMBP2P38935 993 aaKnown RBP20.12■□□□□ 0.81
CHMP4A-207ENST00000533523 NBPF9Q3BBW0 867 aa20.12■□□□□ 0.81
CHMP4A-207ENST00000533523 PRAMEF18Q5VWM3 479 aa20.12■□□□□ 0.81
CHMP4A-207ENST00000533523 OGFOD1Q8N543 542 aa20.12■□□□□ 0.81
CHMP4A-207ENST00000533523 MYO3BQ8WXR4 1341 aa20.11■□□□□ 0.81
CHMP4A-207ENST00000533523 UBE2Q2LH0YL09 131 aa20.11■□□□□ 0.81
CHMP4A-207ENST00000533523 SASH1O94885 1247 aa20.11■□□□□ 0.81
CHMP4A-207ENST00000533523 DACT2Q5SW24 774 aa20.11■□□□□ 0.81
CHMP4A-207ENST00000533523 REM2Q8IYK8 340 aaPredicted RBP20.11■□□□□ 0.81
CHMP4A-207ENST00000533523 TWISTNBQ3B726 338 aaPredicted RBP20.1■□□□□ 0.81
CHMP4A-207ENST00000533523 COA1Q9GZY4 146 aa20.1■□□□□ 0.81
CHMP4A-207ENST00000533523 CEP290O15078 2479 aa20.1■□□□□ 0.81
CHMP4A-207ENST00000533523 KLRK1P26718 216 aa20.09■□□□□ 0.81
CHMP4A-207ENST00000533523 NF2P35240 595 aa20.09■□□□□ 0.81
CHMP4A-207ENST00000533523 NCBP3Q53F19 620 aaKnown RBP20.09■□□□□ 0.81
CHMP4A-207ENST00000533523 STRIP1Q5VSL9 837 aa20.09■□□□□ 0.81
CHMP4A-207ENST00000533523 G2E3Q7L622 706 aa20.09■□□□□ 0.81
CHMP4A-207ENST00000533523 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
CHMP4A-207ENST00000533523 KIAA0100Q14667 2235 aaKnown RBP20.08■□□□□ 0.81
CHMP4A-207ENST00000533523 WNT10BO00744 389 aa20.08■□□□□ 0.81
CHMP4A-207ENST00000533523 ITGA6P23229 1130 aa20.08■□□□□ 0.81
CHMP4A-207ENST00000533523 KCNJ4P48050 445 aa20.08■□□□□ 0.81
CHMP4A-207ENST00000533523 MKRN3Q13064 507 aaKnown RBP20.08■□□□□ 0.81
CHMP4A-207ENST00000533523 CCDC27Q2M243 656 aa20.08■□□□□ 0.81
CHMP4A-207ENST00000533523 LEMD3Q9Y2U8 911 aa20.08■□□□□ 0.81
CHMP4A-207ENST00000533523 COL6A3P12111 3177 aa20.08■□□□□ 0.8
CHMP4A-207ENST00000533523 ZNF804BA4D1E1 1349 aa20.07■□□□□ 0.8
CHMP4A-207ENST00000533523 SLC4A2P04920 1241 aa20.07■□□□□ 0.8
CHMP4A-207ENST00000533523 KIAA0825Q8IV33 1275 aa20.07■□□□□ 0.8
CHMP4A-207ENST00000533523 MPHOSPH8Q99549 860 aa20.07■□□□□ 0.8
CHMP4A-207ENST00000533523 A0A0C4DFX4 3053 aa20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 H7C1W4 665 aa20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 FLIIQ13045 1269 aa20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 FKBP5Q13451 457 aaPredicted RBP20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 GCKRQ14397 625 aa20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 HABP4Q5JVS0 413 aaKnown RBP20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 TTLL5Q6EMB2 1281 aa20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 APOBEC3FQ8IUX4 373 aaKnown RBP20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 ANKRD2Q9GZV1 360 aa20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 MYH16Q9H6N6 1097 aa20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 HDAC9Q9UKV0 1011 aa20.06■□□□□ 0.8
CHMP4A-207ENST00000533523 CAP1Q01518 475 aa20.05■□□□□ 0.8
CHMP4A-207ENST00000533523 PRKG1Q13976 671 aa20.05■□□□□ 0.8
CHMP4A-207ENST00000533523 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
CHMP4A-207ENST00000533523 PLA2G12BQ9BX93 195 aa20.05■□□□□ 0.8
CHMP4A-207ENST00000533523 POTEFA5A3E0 1075 aa20.04■□□□□ 0.8
CHMP4A-207ENST00000533523 GPR25O00155 361 aa20.04■□□□□ 0.8
CHMP4A-207ENST00000533523 GTF2IP78347 998 aa20.04■□□□□ 0.8
CHMP4A-207ENST00000533523 DNAAF4Q8WXU2 420 aa20.04■□□□□ 0.8
CHMP4A-207ENST00000533523 COL1A1P02452 1464 aaPredicted RBP20.04■□□□□ 0.8
CHMP4A-207ENST00000533523 TRIOBPQ9H2D6 2365 aa20.03■□□□□ 0.8
CHMP4A-207ENST00000533523 CHRNDQ07001 517 aa20.03■□□□□ 0.8
CHMP4A-207ENST00000533523 ARMC9Q7Z3E5 817 aa20.03■□□□□ 0.8
CHMP4A-207ENST00000533523 OTOFQ9HC10 1997 aa20.03■□□□□ 0.8
CHMP4A-207ENST00000533523 ARAP2Q8WZ64 1704 aa20.02■□□□□ 0.8
CHMP4A-207ENST00000533523 LAMA3Q16787 3333 aa20.02■□□□□ 0.8
CHMP4A-207ENST00000533523 TM4SF4P48230 202 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms