RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 PRAG1Q86YV5 1406 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 PRPF4BQ13523 1007 aaKnown RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 SPTY2D1Q68D10 685 aaPredicted RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 RAB11FIP4Q86YS3 637 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 RBSNQ9H1K0 784 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 USH1CQ9Y6N9 552 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 CEP104O60308 925 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 HPDP32754 393 aaPredicted RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 ZSCAN29Q8IWY8 852 aaPredicted RBP8.9□□□□□ -0.98
CSRP1-218ENST00000533402 CEP131Q9UPN4 1083 aa8.9□□□□□ -0.98
CSRP1-218ENST00000533402 ASXL1Q8IXJ9 1541 aa8.9□□□□□ -0.99
CSRP1-218ENST00000533402 MAP4K4O95819 1239 aaPredicted RBP8.9□□□□□ -0.99
CSRP1-218ENST00000533402 CNNM3Q8NE01 707 aa8.9□□□□□ -0.99
CSRP1-218ENST00000533402 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.9□□□□□ -0.99
CSRP1-218ENST00000533402 LIMCH1Q9UPQ0 1083 aa8.9□□□□□ -0.99
CSRP1-218ENST00000533402 KIAA0753Q2KHM9 967 aa8.9□□□□□ -0.99
CSRP1-218ENST00000533402 PPP1R14CQ8TAE6 165 aa8.9□□□□□ -0.99
CSRP1-218ENST00000533402 ZHX3Q9H4I2 956 aa8.9□□□□□ -0.99
CSRP1-218ENST00000533402 CIB2O75838 187 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 FCHSD2O94868 740 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 AIMP1Q12904 312 aaKnown RBP8.89□□□□□ -0.99
CSRP1-218ENST00000533402 CFAP70Q5T0N1 1121 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 MCTP2Q6DN12 878 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 CNNM1Q9NRU3 951 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 CLASP1Q7Z460 1538 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 PSMC4P43686 418 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 PHLDB2Q86SQ0 1253 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 VIMP08670 466 aaKnown RBP8.89□□□□□ -0.99
CSRP1-218ENST00000533402 RPSAP08865 295 aaKnown RBP8.89□□□□□ -0.99
CSRP1-218ENST00000533402 AMOTQ4VCS5 1084 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 SPATS2Q86XZ4 545 aaKnown RBP8.89□□□□□ -0.99
CSRP1-218ENST00000533402 TFIP11Q9UBB9 837 aaKnown RBP8.89□□□□□ -0.99
CSRP1-218ENST00000533402 ANAPC4Q9UJX5 808 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 RASIP1Q5U651 963 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 CDK19Q9BWU1 502 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 INSRP06213 1382 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 ALDH3A1P30838 453 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 MUM1Q2TAK8 710 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 CAPZA3Q96KX2 299 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 PPFIA2O75334 1257 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 ERCC3P19447 782 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 CHMP4BP1P59074 171 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 TYRO3Q06418 890 aa8.89□□□□□ -0.99
CSRP1-218ENST00000533402 APBB1IPQ7Z5R6 666 aaPredicted RBP8.89□□□□□ -0.99
CSRP1-218ENST00000533402 RIMS2Q9UQ26 1411 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 UBAC1Q9BSL1 405 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 SAMD9LQ8IVG5 1584 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 DDX12PQ92771 950 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 DNAJC25Q9H1X3 360 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 IGHMBP2P38935 993 aaKnown RBP8.88□□□□□ -0.99
CSRP1-218ENST00000533402 CCDC110Q8TBZ0 833 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 TSPYL4Q9UJ04 414 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 FAF1Q9UNN5 650 aaPredicted RBP8.88□□□□□ -0.99
CSRP1-218ENST00000533402 PPIP5K1Q6PFW1 1433 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 ANAPC15P60006 121 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 IFT81Q8WYA0 676 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 SPHKAPQ2M3C7 1700 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 CCDC92Q53HC0 331 aaPredicted RBP8.88□□□□□ -0.99
CSRP1-218ENST00000533402 LZTFL1Q9NQ48 299 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 CNPY2Q9Y2B0 182 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 IKBKGQ9Y6K9 419 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 UNC13BO14795 1591 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 MSH6P52701 1360 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 A0A087WZG4 1122 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 ZNF569Q5MCW4 686 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 TRIM6Q9C030 488 aaPredicted RBP8.88□□□□□ -0.99
CSRP1-218ENST00000533402 VCX3AQ9NNX9 186 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 NLRP1Q9C000 1473 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 NPC1L1Q9UHC9 1359 aa8.88□□□□□ -0.99
CSRP1-218ENST00000533402 MAP7D1Q3KQU3 841 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 ABTB1Q969K4 478 aaPredicted RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 SNX21Q969T3 373 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 BMP2KQ9NSY1 1161 aaPredicted RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 TTC37Q6PGP7 1564 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 GOLGA6BA6NDN3 693 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 GJB2P29033 226 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 SOS1Q07889 1333 aaPredicted RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 MACROD2A1Z1Q3 448 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 HIP1RO75146 1068 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 KARSQ15046 597 aaKnown RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 SMIM23A6NLE4 172 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 TRAF1Q13077 416 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 AOPEPQ8N6M6 819 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 NOS1P29475 1434 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 ZSCAN22P10073 491 aaPredicted RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 FERP16591 822 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 CYLC1P35663 651 aaPredicted RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 PPFIA1Q13136 1202 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 STAG1Q8WVM7 1258 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 IQCGQ9H095 443 aaKnown RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 GIGYF1O75420 1035 aaPredicted RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 GRIPAP1Q4V328 841 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 CCDC170Q8IYT3 715 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 ARHGEF2Q92974 986 aaKnown RBP8.87□□□□□ -0.99
CSRP1-218ENST00000533402 CARD6Q9BX69 1037 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 ATP2B2Q01814 1243 aa8.87□□□□□ -0.99
CSRP1-218ENST00000533402 GSDMBQ8TAX9 411 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms