RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 UBE4AQ14139 1066 aa22.5■■□□□ 1.19
SMPD1-208ENST00000533123 AOX1Q06278 1338 aa22.49■■□□□ 1.19
SMPD1-208ENST00000533123 IFIT1P09914 478 aaKnown RBP22.49■■□□□ 1.19
SMPD1-208ENST00000533123 TGFB2P61812 414 aa22.49■■□□□ 1.19
SMPD1-208ENST00000533123 ZNF219Q9P2Y4 722 aaPredicted RBP22.49■■□□□ 1.19
SMPD1-208ENST00000533123 SLX4Q8IY92 1834 aa22.49■■□□□ 1.19
SMPD1-208ENST00000533123 XDHP47989 1333 aa22.49■■□□□ 1.19
SMPD1-208ENST00000533123 ERC2O15083 957 aa22.49■■□□□ 1.19
SMPD1-208ENST00000533123 GLRX3O76003 335 aaKnown RBP22.49■■□□□ 1.19
SMPD1-208ENST00000533123 BOLA2Q9H3K6 86 aa22.49■■□□□ 1.19
SMPD1-208ENST00000533123 ZNF804BA4D1E1 1349 aa22.48■■□□□ 1.19
SMPD1-208ENST00000533123 MAP4K4O95819 1239 aaPredicted RBP22.48■■□□□ 1.19
SMPD1-208ENST00000533123 CCDC158Q5M9N0 1113 aa22.48■■□□□ 1.19
SMPD1-208ENST00000533123 WWC3Q9ULE0 1092 aa22.47■■□□□ 1.19
SMPD1-208ENST00000533123 CD2APQ9Y5K6 639 aa22.47■■□□□ 1.19
SMPD1-208ENST00000533123 KLRK1P26718 216 aa22.47■■□□□ 1.19
SMPD1-208ENST00000533123 TRIM6-TRIM34B2RNG4 842 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 ATP5JP18859 108 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 CCDC102BQ68D86 513 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 TTLL6Q8N841 843 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 DLEC1Q9Y238 1755 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 PHKA1P46020 1223 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 TTC39AQ5SRH9 613 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 RILPL2Q969X0 211 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 TMX4Q9H1E5 349 aaPredicted RBP22.46■■□□□ 1.19
SMPD1-208ENST00000533123 LEMD3Q9Y2U8 911 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 NDUFB9Q9Y6M9 179 aa22.46■■□□□ 1.19
SMPD1-208ENST00000533123 LRRC37AA6NMS7 1700 aa22.45■■□□□ 1.18
SMPD1-208ENST00000533123 SOCS7O14512 581 aa22.45■■□□□ 1.18
SMPD1-208ENST00000533123 BCAMP50895 628 aa22.45■■□□□ 1.18
SMPD1-208ENST00000533123 GPR101Q96P66 508 aaPredicted RBP22.45■■□□□ 1.18
SMPD1-208ENST00000533123 PODXL2Q9NZ53 605 aa22.45■■□□□ 1.18
SMPD1-208ENST00000533123 UFL1O94874 794 aa22.45■■□□□ 1.18
SMPD1-208ENST00000533123 GYG1P46976 350 aa22.45■■□□□ 1.18
SMPD1-208ENST00000533123 GGA1Q9UJY5 639 aa22.45■■□□□ 1.18
SMPD1-208ENST00000533123 UTRNP46939 3433 aa22.44■■□□□ 1.18
SMPD1-208ENST00000533123 TXNRD3Q86VQ6 643 aa22.44■■□□□ 1.18
SMPD1-208ENST00000533123 C7orf43Q8WVR3 580 aa22.44■■□□□ 1.18
SMPD1-208ENST00000533123 PIM2Q9P1W9 311 aa22.44■■□□□ 1.18
SMPD1-208ENST00000533123 POLLQ9UGP5 575 aa22.44■■□□□ 1.18
SMPD1-208ENST00000533123 KIAA1551Q9HCM1 1747 aa22.44■■□□□ 1.18
SMPD1-208ENST00000533123 ARAP2Q8WZ64 1704 aa22.44■■□□□ 1.18
SMPD1-208ENST00000533123 RBM25P49756 843 aaKnown RBP22.43■■□□□ 1.18
SMPD1-208ENST00000533123 CASC1Q6TDU7 716 aa22.43■■□□□ 1.18
SMPD1-208ENST00000533123 MPNDQ8N594 471 aa22.43■■□□□ 1.18
SMPD1-208ENST00000533123 TBC1D16Q8TBP0 767 aa22.43■■□□□ 1.18
SMPD1-208ENST00000533123 C21orf2O43822 256 aa22.43■■□□□ 1.18
SMPD1-208ENST00000533123 ATP2B4P23634 1241 aa22.43■■□□□ 1.18
SMPD1-208ENST00000533123 SCARF1Q14162 830 aa22.43■■□□□ 1.18
SMPD1-208ENST00000533123 C6orf229H3BNL8 230 aa22.42■■□□□ 1.18
SMPD1-208ENST00000533123 DPP8Q6V1X1 898 aaPredicted RBP22.42■■□□□ 1.18
SMPD1-208ENST00000533123 EDC3Q96F86 508 aaKnown RBP22.42■■□□□ 1.18
SMPD1-208ENST00000533123 FAM84BQ96KN1 310 aaPredicted RBP22.42■■□□□ 1.18
SMPD1-208ENST00000533123 DNAJC2Q99543 621 aaKnown RBP22.42■■□□□ 1.18
SMPD1-208ENST00000533123 CAVIN4Q5BKX8 364 aa22.42■■□□□ 1.18
SMPD1-208ENST00000533123 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
SMPD1-208ENST00000533123 SNRKQ9NRH2 765 aa22.42■■□□□ 1.18
SMPD1-208ENST00000533123 HAUS7Q99871 368 aa22.41■■□□□ 1.18
SMPD1-208ENST00000533123 IRS2Q9Y4H2 1338 aa22.41■■□□□ 1.18
SMPD1-208ENST00000533123 MCAMP43121 646 aa22.41■■□□□ 1.18
SMPD1-208ENST00000533123 NBR1Q14596 966 aa22.41■■□□□ 1.18
SMPD1-208ENST00000533123 PI16Q6UXB8 463 aa22.41■■□□□ 1.18
SMPD1-208ENST00000533123 VPS37DQ86XT2 251 aa22.41■■□□□ 1.18
SMPD1-208ENST00000533123 IQSEC3Q9UPP2 1182 aaPredicted RBP22.41■■□□□ 1.18
SMPD1-208ENST00000533123 AK9Q5TCS8 1911 aa22.4■■□□□ 1.18
SMPD1-208ENST00000533123 LTBP1Q14766 1721 aa22.4■■□□□ 1.18
SMPD1-208ENST00000533123 FKBP4Q02790 459 aaKnown RBP eCLIP22.4■■□□□ 1.18
SMPD1-208ENST00000533123 DAXXQ9UER7 740 aaPredicted RBP22.4■■□□□ 1.18
SMPD1-208ENST00000533123 ARID4AP29374 1257 aaPredicted RBP22.39■■□□□ 1.18
SMPD1-208ENST00000533123 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.39■■□□□ 1.18
SMPD1-208ENST00000533123 ZNF512BQ96KM6 892 aaPredicted RBP22.39■■□□□ 1.18
SMPD1-208ENST00000533123 UQCRFS1P1P0C7P4 283 aa22.39■■□□□ 1.17
SMPD1-208ENST00000533123 HIBADHP31937 336 aaKnown RBP22.39■■□□□ 1.17
SMPD1-208ENST00000533123 FBXO33Q7Z6M2 555 aa22.39■■□□□ 1.17
SMPD1-208ENST00000533123 CNTROBQ8N137 903 aa22.39■■□□□ 1.17
SMPD1-208ENST00000533123 FHDC1Q9C0D6 1143 aaPredicted RBP22.39■■□□□ 1.17
SMPD1-208ENST00000533123 CHMLP26374 656 aa22.38■■□□□ 1.17
SMPD1-208ENST00000533123 DALRD3Q5D0E6 543 aaKnown RBP22.38■■□□□ 1.17
SMPD1-208ENST00000533123 GOLIM4O00461 696 aa22.38■■□□□ 1.17
SMPD1-208ENST00000533123 RASGRF1Q13972 1273 aa22.38■■□□□ 1.17
SMPD1-208ENST00000533123 DUOX1Q9NRD9 1551 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 RIMBP2O15034 1052 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 ZAP70P43403 619 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 EVI5LQ96CN4 794 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 KIF2CQ99661 725 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 PAG1Q9NWQ8 432 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 HMG20BQ9P0W2 317 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 AKAP11Q9UKA4 1901 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 CC2D2BQ6DHV5 1058 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 USP26Q9BXU7 913 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 ANTXR1Q9H6X2 564 aa22.37■■□□□ 1.17
SMPD1-208ENST00000533123 BRCA1P38398 1863 aaKnown RBP22.36■■□□□ 1.17
SMPD1-208ENST00000533123 C15orf52Q6ZUT6 534 aaKnown RBP22.36■■□□□ 1.17
SMPD1-208ENST00000533123 GNL3LQ9NVN8 582 aaKnown RBP22.36■■□□□ 1.17
SMPD1-208ENST00000533123 SPATA5Q8NB90 893 aa22.35■■□□□ 1.17
SMPD1-208ENST00000533123 ESYT1Q9BSJ8 1104 aa22.35■■□□□ 1.17
SMPD1-208ENST00000533123 BCS1LQ9Y276 419 aa22.35■■□□□ 1.17
SMPD1-208ENST00000533123 SNED1Q8TER0 1413 aa22.35■■□□□ 1.17
SMPD1-208ENST00000533123 MED23Q9ULK4 1368 aa22.35■■□□□ 1.17
SMPD1-208ENST00000533123 CCDC93Q567U6 631 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms