RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 C2orf69Q8N8R5 385 aa22.68■■□□□ 1.22
PCF11-206ENST00000533018 PLA2G12BQ9BX93 195 aa22.68■■□□□ 1.22
PCF11-206ENST00000533018 SPINK5Q9NQ38 1064 aaPredicted RBP22.68■■□□□ 1.22
PCF11-206ENST00000533018 ASTN2O75129 1339 aaPredicted RBP22.67■■□□□ 1.22
PCF11-206ENST00000533018 F6X3S4 739 aa22.67■■□□□ 1.22
PCF11-206ENST00000533018 SCARF1Q14162 830 aa22.67■■□□□ 1.22
PCF11-206ENST00000533018 ANKRD2Q9GZV1 360 aa22.67■■□□□ 1.22
PCF11-206ENST00000533018 GBA2Q9HCG7 927 aaPredicted RBP22.67■■□□□ 1.22
PCF11-206ENST00000533018 TSKSQ9UJT2 592 aa22.67■■□□□ 1.22
PCF11-206ENST00000533018 CHMP3Q9Y3E7 222 aa22.67■■□□□ 1.22
PCF11-206ENST00000533018 KCNJ4P48050 445 aa22.66■■□□□ 1.22
PCF11-206ENST00000533018 CASP7P55210 303 aa22.66■■□□□ 1.22
PCF11-206ENST00000533018 ZNF280AP59817 542 aaPredicted RBP22.66■■□□□ 1.22
PCF11-206ENST00000533018 ANGEL2Q5VTE6 544 aaKnown RBP22.66■■□□□ 1.22
PCF11-206ENST00000533018 MYOZ2Q9NPC6 264 aa22.66■■□□□ 1.22
PCF11-206ENST00000533018 LEMD3Q9Y2U8 911 aa22.66■■□□□ 1.22
PCF11-206ENST00000533018 ZNF804BA4D1E1 1349 aa22.65■■□□□ 1.22
PCF11-206ENST00000533018 ANKRD18BA2A2Z9 1011 aa22.65■■□□□ 1.22
PCF11-206ENST00000533018 CSF1RP07333 972 aa22.65■■□□□ 1.22
PCF11-206ENST00000533018 COA1Q9GZY4 146 aa22.65■■□□□ 1.22
PCF11-206ENST00000533018 BRPF1P55201 1214 aaPredicted RBP22.63■■□□□ 1.21
PCF11-206ENST00000533018 NOGQ13253 232 aa22.63■■□□□ 1.21
PCF11-206ENST00000533018 RGMBQ6NW40 437 aa22.63■■□□□ 1.21
PCF11-206ENST00000533018 TXNRD3Q86VQ6 643 aa22.63■■□□□ 1.21
PCF11-206ENST00000533018 OGFOD1Q8N543 542 aa22.63■■□□□ 1.21
PCF11-206ENST00000533018 CDCA5Q96FF9 252 aa22.63■■□□□ 1.21
PCF11-206ENST00000533018 GMLQ99445 158 aa22.63■■□□□ 1.21
PCF11-206ENST00000533018 MXD3Q9BW11 206 aa22.63■■□□□ 1.21
PCF11-206ENST00000533018 ZNF157P51786 506 aaPredicted RBP22.62■■□□□ 1.21
PCF11-206ENST00000533018 CHRNDQ07001 517 aa22.62■■□□□ 1.21
PCF11-206ENST00000533018 IFIT5Q13325 482 aaKnown RBP22.62■■□□□ 1.21
PCF11-206ENST00000533018 BEND3Q5T5X7 828 aa22.62■■□□□ 1.21
PCF11-206ENST00000533018 ZNF609O15014 1411 aa22.62■■□□□ 1.21
PCF11-206ENST00000533018 CA12O43570 354 aa22.61■■□□□ 1.21
PCF11-206ENST00000533018 DACT2Q5SW24 774 aa22.61■■□□□ 1.21
PCF11-206ENST00000533018 SLC4A10Q6U841 1118 aa22.61■■□□□ 1.21
PCF11-206ENST00000533018 KLRK1P26718 216 aa22.6■■□□□ 1.21
PCF11-206ENST00000533018 TAF7LQ5H9L4 462 aa22.6■■□□□ 1.21
PCF11-206ENST00000533018 STRIP1Q5VSL9 837 aa22.6■■□□□ 1.21
PCF11-206ENST00000533018 TTLL5Q6EMB2 1281 aa22.6■■□□□ 1.21
PCF11-206ENST00000533018 C9orf78Q9NZ63 289 aaPredicted RBP22.6■■□□□ 1.21
PCF11-206ENST00000533018 SCAF8Q9UPN6 1271 aaKnown RBP22.6■■□□□ 1.21
PCF11-206ENST00000533018 MYO3BQ8WXR4 1341 aa22.59■■□□□ 1.21
PCF11-206ENST00000533018 TAF5LO75529 589 aa22.59■■□□□ 1.21
PCF11-206ENST00000533018 FOXO4P98177 505 aa22.59■■□□□ 1.21
PCF11-206ENST00000533018 HELBQ8NG08 1087 aaPredicted RBP22.59■■□□□ 1.21
PCF11-206ENST00000533018 CCDC102AQ96A19 550 aa22.59■■□□□ 1.21
PCF11-206ENST00000533018 ZIC5Q96T25 663 aa22.59■■□□□ 1.21
PCF11-206ENST00000533018 GTF2IP78347 998 aa22.58■■□□□ 1.21
PCF11-206ENST00000533018 CCDC57Q2TAC2 916 aa22.58■■□□□ 1.21
PCF11-206ENST00000533018 NBPF9Q3BBW0 867 aa22.58■■□□□ 1.21
PCF11-206ENST00000533018 LMBR1LQ6UX01 489 aa22.58■■□□□ 1.21
PCF11-206ENST00000533018 CASP8AP2Q9UKL3 1982 aa22.58■■□□□ 1.2
PCF11-206ENST00000533018 GRM8O00222 908 aa22.57■■□□□ 1.2
PCF11-206ENST00000533018 PITPNM2Q9BZ72 1349 aa22.57■■□□□ 1.2
PCF11-206ENST00000533018 SNAP23O00161 211 aa22.56■■□□□ 1.2
PCF11-206ENST00000533018 PLIN1O60240 522 aa22.56■■□□□ 1.2
PCF11-206ENST00000533018 KIAA0825Q8IV33 1275 aa22.56■■□□□ 1.2
PCF11-206ENST00000533018 SRCIN1Q9C0H9 1055 aa22.56■■□□□ 1.2
PCF11-206ENST00000533018 HDAC9Q9UKV0 1011 aa22.56■■□□□ 1.2
PCF11-206ENST00000533018 FAM155AB1AL88 458 aaPredicted RBP22.55■■□□□ 1.2
PCF11-206ENST00000533018 KIF23Q02241 960 aaPredicted RBP22.55■■□□□ 1.2
PCF11-206ENST00000533018 PRAMEF18Q5VWM3 479 aa22.55■■□□□ 1.2
PCF11-206ENST00000533018 ABHD8Q96I13 439 aa22.55■■□□□ 1.2
PCF11-206ENST00000533018 ZNF594Q96JF6 807 aaPredicted RBP22.55■■□□□ 1.2
PCF11-206ENST00000533018 CD209Q9NNX6 404 aa22.55■■□□□ 1.2
PCF11-206ENST00000533018 ZNF646O15015 1829 aaPredicted RBP22.54■■□□□ 1.2
PCF11-206ENST00000533018 WNT10BO00744 389 aa22.54■■□□□ 1.2
PCF11-206ENST00000533018 ALDH1L1O75891 902 aa22.54■■□□□ 1.2
PCF11-206ENST00000533018 SASH1O94885 1247 aa22.54■■□□□ 1.2
PCF11-206ENST00000533018 TTLL12Q14166 644 aaPredicted RBP22.54■■□□□ 1.2
PCF11-206ENST00000533018 EPHA10Q5JZY3 1008 aa22.54■■□□□ 1.2
PCF11-206ENST00000533018 LDHAL6AQ6ZMR3 332 aa22.54■■□□□ 1.2
PCF11-206ENST00000533018 CNNM1Q9NRU3 951 aa22.54■■□□□ 1.2
PCF11-206ENST00000533018 AKAP11Q9UKA4 1901 aa22.53■■□□□ 1.2
PCF11-206ENST00000533018 SLC10A3P09131 477 aa22.52■■□□□ 1.2
PCF11-206ENST00000533018 MMP14P50281 582 aa22.52■■□□□ 1.2
PCF11-206ENST00000533018 FKBP1BP68106 108 aa22.52■■□□□ 1.2
PCF11-206ENST00000533018 ZNF804AQ7Z570 1209 aa22.52■■□□□ 1.2
PCF11-206ENST00000533018 A0A1B0GUL6 1792 aa22.51■■□□□ 1.19
PCF11-206ENST00000533018 NF2P35240 595 aa22.51■■□□□ 1.19
PCF11-206ENST00000533018 MOB2Q70IA6 237 aa22.51■■□□□ 1.19
PCF11-206ENST00000533018 ZNF521Q96K83 1311 aa22.5■■□□□ 1.19
PCF11-206ENST00000533018 PAPPA2Q9BXP8 1791 aa22.5■■□□□ 1.19
PCF11-206ENST00000533018 CCDC85CA6NKD9 419 aa22.49■■□□□ 1.19
PCF11-206ENST00000533018 UBE2Q2LH0YL09 131 aa22.49■■□□□ 1.19
PCF11-206ENST00000533018 TRPA1O75762 1119 aa22.49■■□□□ 1.19
PCF11-206ENST00000533018 SUCLG2Q96I99 432 aa22.49■■□□□ 1.19
PCF11-206ENST00000533018 F8W031 263 aaPredicted RBP22.48■■□□□ 1.19
PCF11-206ENST00000533018 DLGAP5Q15398 846 aa22.48■■□□□ 1.19
PCF11-206ENST00000533018 C15orf52Q6ZUT6 534 aaKnown RBP22.48■■□□□ 1.19
PCF11-206ENST00000533018 RASAL3Q86YV0 1011 aa22.48■■□□□ 1.19
PCF11-206ENST00000533018 CSRNP1Q96S65 589 aa22.48■■□□□ 1.19
PCF11-206ENST00000533018 JAG2Q9Y219 1238 aa22.48■■□□□ 1.19
PCF11-206ENST00000533018 E9PSI1 815 aa22.47■■□□□ 1.19
PCF11-206ENST00000533018 NBPF7P0C2Y1 421 aaPredicted RBP22.47■■□□□ 1.19
PCF11-206ENST00000533018 PRKG1Q13976 671 aa22.47■■□□□ 1.19
PCF11-206ENST00000533018 APOBEC3FQ8IUX4 373 aaKnown RBP22.47■■□□□ 1.19
PCF11-206ENST00000533018 MRPL50Q8N5N7 158 aaKnown RBP22.47■■□□□ 1.19
PCF11-206ENST00000533018 RNF186Q9NXI6 227 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms