RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 CCDC184Q52MB2 194 aa2.53□□□□□ -2
KNL1-211ENST00000533001 DACT2Q5SW24 774 aa2.53□□□□□ -2
KNL1-211ENST00000533001 KHSRPQ92945 711 aaKnown RBP eCLIP2.53□□□□□ -21e-6■■□□□ 12.3
KNL1-211ENST00000533001 COG3Q96JB2 828 aa2.53□□□□□ -2
KNL1-211ENST00000533001 GDF15Q99988 308 aa2.53□□□□□ -2
KNL1-211ENST00000533001 HIVEP1P15822 2718 aa2.53□□□□□ -2
KNL1-211ENST00000533001 FCHSD2O94868 740 aa2.53□□□□□ -2
KNL1-211ENST00000533001 NLRP10Q86W26 655 aa2.53□□□□□ -2
KNL1-211ENST00000533001 RASAL3Q86YV0 1011 aa2.53□□□□□ -2
KNL1-211ENST00000533001 DPF2Q92785 391 aa2.53□□□□□ -2
KNL1-211ENST00000533001 SAGE1Q9NXZ1 904 aa2.53□□□□□ -2
KNL1-211ENST00000533001 TTC3P53804 2025 aa2.53□□□□□ -2
KNL1-211ENST00000533001 DOCK8Q8NF50 2099 aa2.53□□□□□ -2
KNL1-211ENST00000533001 POLD1P28340 1107 aa2.53□□□□□ -2
KNL1-211ENST00000533001 EPHX2P34913 555 aa2.53□□□□□ -2
KNL1-211ENST00000533001 CRAMP1Q96RY5 1269 aa2.53□□□□□ -2
KNL1-211ENST00000533001 COLQQ9Y215 455 aaPredicted RBP2.53□□□□□ -2
KNL1-211ENST00000533001 ERVV-1B6SEH8 477 aa2.53□□□□□ -2
KNL1-211ENST00000533001 TATP17735 454 aaPredicted RBP2.53□□□□□ -2
KNL1-211ENST00000533001 ARHGAP27Q6ZUM4 889 aa2.53□□□□□ -2
KNL1-211ENST00000533001 ZC3H15Q8WU90 426 aaKnown RBP2.53□□□□□ -2
KNL1-211ENST00000533001 TERF2IPQ9NYB0 399 aa2.53□□□□□ -2
KNL1-211ENST00000533001 JAG1P78504 1218 aa2.53□□□□□ -2.01
KNL1-211ENST00000533001 ERFEQ4G0M1 354 aa2.53□□□□□ -2.01
KNL1-211ENST00000533001 THUMPD2Q9BTF0 503 aaKnown RBP2.53□□□□□ -2.01
KNL1-211ENST00000533001 RNF186Q9NXI6 227 aa2.53□□□□□ -2.01
KNL1-211ENST00000533001 FZD1Q9UP38 647 aa2.53□□□□□ -2.01
KNL1-211ENST00000533001 HPS5Q9UPZ3 1129 aa2.53□□□□□ -2.01
KNL1-211ENST00000533001 DCAF8L1A6NGE4 600 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 NUTM1Q86Y26 1132 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 COL6A1P12109 1028 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 MKRN4PQ13434 485 aaPredicted RBP2.52□□□□□ -2.01
KNL1-211ENST00000533001 MAP3K21Q5TCX8 1036 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 CIAPIN1Q6FI81 312 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 ZNF530Q6P9A1 599 aaPredicted RBP2.52□□□□□ -2.01
KNL1-211ENST00000533001 ZNF333Q96JL9 665 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 TMOD3Q9NYL9 352 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 CACNA1EQ15878 2313 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 PFASO15067 1338 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 ADM5C9JUS6 153 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 DEFB115Q30KQ5 88 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 SAMD7Q7Z3H4 446 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 MASTLQ96GX5 879 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 MXRA5Q9NR99 2828 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 APC2O95996 2303 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 F5P12259 2224 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 MAP3K15Q6ZN16 1313 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 IARSP41252 1262 aaKnown RBP2.52□□□□□ -2.01
KNL1-211ENST00000533001 CTCFP49711 727 aaPredicted RBP2.52□□□□□ -2.01
KNL1-211ENST00000533001 PPP1R3FQ6ZSY5 799 aaPredicted RBP2.52□□□□□ -2.01
KNL1-211ENST00000533001 AK7Q96M32 723 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 ARHGAP39Q9C0H5 1083 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 GON4LQ3T8J9 2241 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 KDM2BQ8NHM5 1336 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 TRIP12Q14669 1992 aaPredicted RBP2.52□□□□□ -2.01
KNL1-211ENST00000533001 MYCNP04198 464 aaPredicted RBP2.52□□□□□ -2.01
KNL1-211ENST00000533001 ARP10275 920 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 RRP1BQ14684 758 aaKnown RBP2.52□□□□□ -2.01
KNL1-211ENST00000533001 EPHA10Q5JZY3 1008 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 TAOK3Q9H2K8 898 aa2.52□□□□□ -2.01
KNL1-211ENST00000533001 PHF20L1A8MW92 1017 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 SLC4A2P04920 1241 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 AMOTQ4VCS5 1084 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 ZNF296Q8WUU4 475 aaPredicted RBP2.51□□□□□ -2.01
KNL1-211ENST00000533001 CLMNQ96JQ2 1002 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 ANXA1P04083 346 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 CSF1RP07333 972 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 C2CD5Q86YS7 1000 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 RAPGEF4Q8WZA2 1011 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 SYTL4Q96C24 671 aaPredicted RBP2.51□□□□□ -2.01
KNL1-211ENST00000533001 WNT10BO00744 389 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 HSPA5P11021 654 aaKnown RBP2.51□□□□□ -2.01
KNL1-211ENST00000533001 MYT1Q01538 1121 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 MTMR14Q8NCE2 650 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 CRISPLD2Q9H0B8 497 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 GMPSP49915 693 aaPredicted RBP2.51□□□□□ -2.01
KNL1-211ENST00000533001 NBPF9Q3BBW0 867 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 MCM10Q7L590 875 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 OTOP1Q7RTM1 612 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 USP6NLQ92738 828 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 GPR101Q96P66 508 aaPredicted RBP2.51□□□□□ -2.01
KNL1-211ENST00000533001 MXD3Q9BW11 206 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 COL25A1Q9BXS0 654 aaPredicted RBP2.51□□□□□ -2.01
KNL1-211ENST00000533001 KNL1Q8NG31 2342 aa2.51□□□□□ -2.01
KNL1-211ENST00000533001 C15orf52Q6ZUT6 534 aaKnown RBP2.5□□□□□ -2.01
KNL1-211ENST00000533001 SH3BP5LQ7L8J4 393 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 RBM27Q9P2N5 1060 aaKnown RBP2.5□□□□□ -2.01
KNL1-211ENST00000533001 TIMELESSQ9UNS1 1208 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 CLSPNQ9HAW4 1339 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 EN2P19622 333 aaPredicted RBP2.5□□□□□ -2.01
KNL1-211ENST00000533001 USP50Q70EL3 339 aaPredicted RBP2.5□□□□□ -2.01
KNL1-211ENST00000533001 GUCD1Q96NT3 240 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 VPS33BQ9H267 617 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 ZNF804BA4D1E1 1349 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 HAP1P54257 671 aaPredicted RBP2.5□□□□□ -2.01
KNL1-211ENST00000533001 TBC1D16Q8TBP0 767 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 LRCH3Q96II8 777 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 NPR1P16066 1061 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 AMPHP49418 695 aa2.5□□□□□ -2.01
KNL1-211ENST00000533001 PITPNM2Q9BZ72 1349 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms